- Transcript 'KH2012:KH.C14.177.v2...'
Transcript Model
Transcript Id
KH2012:KH.C14.177.v2.B.SL1-1
Possible name(s)
RARS; RARS2; ZFP42
Gene model
Location
KhC14 [4,210,105 / 4,223,233]
Amino acid sequence
Length: 700
>KH.C14.177.v2.B.SL1-1
TELVNIICWKMTSNGSISKAEYERISLTIQKQEKEAAELKKELEALENGSYVLKEEEMSE
KSLKLMASNAKLAYQATHLQRALDAEVSQQRVPEFTQQTTNFNDGMVNINQRLTEIFLHS
ISASFPGLKGKLPVSITLNQNEKFGDYQCNSAMPISGVLKAQGTKMAPRQIAELILKNLP
SSDLIDSCNIAGPGFINIRLNVSFLKRALSDVLVHGVRTHHSKGECGKVVIDYSSPNIAK
EMHVGHLRSTIIGDCIANLFEYFGHEVLRVNHVGDWGTQFGMLIAHLTDMFPNYKEESPP
IGDLQAFYKQSKKRFDDDPEFKKRAYSCVVKLQSGDPDFINAWKLICDVSRKEFQVIYDR
LGIVNLIERGESFYHNLMPPVIAEIEKQGYVVVEDGRKLVFPEGSQFPLTIVKSDGGFTY
DTSDLACIKQRIFDESGANLIYVTDAGQAAHFKAIYSVARKMGWYDPQVTRVEHVAFGVV
LGEDRKKFKTRSGETVRLAALLDEGRKRCEEKLKEKGRDKELTPEEFKAAQEAVAYGCIK
YADLSHNRINDYVFSFDKMLEDRGNTAAYLLYAYTRIKSIARVAKVSREELKEAASSFYD
DDGLPLEHAKELKLARFITRFPEVLQRVCDDLAPHTLCDYLYELATVYTEFYDVCYCVEK
DRKTGDVVKIHKHRLLLCDATVAVMDQCFKILGIKPVHKM
Nucleotide sequence
Length: 2,399
>KH2012:KH.C14.177.v2.B.SL1-1
GTCTATATATATATAGGGGTGTAAACTGAGCTAGTTAATATAATCTGTTGGAAAATGACA
TCGAACGGTAGCATAAGTAAAGCAGAATACGAAAGAATCTCACTGACAATACAAAAACAG
GAGAAAGAAGCCGCGGAACTGAAGAAAGAACTGGAAGCATTAGAGAATGGAAGTTATGTT
TTAAAGGAAGAAGAAATGAGCGAAAAAAGCTTGAAACTGATGGCTAGCAATGCAAAGTTG
GCGTACCAGGCTACACACTTACAAAGGGCATTAGATGCTGAAGTATCACAGCAACGAGTG
CCAGAGTTCACCCAGCAAACCACAAACTTCAACGACGGGATGGTAAACATCAACCAAAGG
TTGACAGAAATATTTCTTCACTCAATATCTGCAAGTTTCCCTGGTTTGAAGGGGAAACTC
CCTGTTTCGATAACTTTGAACCAAAATGAGAAGTTTGGAGATTATCAATGTAACAGTGCA
ATGCCAATATCTGGGGTTCTAAAAGCCCAGGGAACGAAAATGGCTCCACGTCAAATTGCG
GAATTAATTTTAAAGAACCTTCCCTCATCTGATCTAATAGATAGTTGCAACATTGCGGGA
CCAGGATTTATAAATATTCGATTAAATGTTTCTTTCCTGAAGAGGGCGCTGTCTGATGTT
TTAGTCCATGGGGTGCGGACACATCATTCTAAAGGAGAATGTGGGAAGGTAGTGATCGAT
TATTCTTCACCAAACATCGCAAAAGAAATGCACGTCGGCCATTTACGATCCACCATTATT
GGTGATTGCATCGCTAATCTCTTTGAATACTTTGGTCACGAAGTACTTAGAGTTAACCAT
GTAGGGGATTGGGGAACCCAGTTTGGGATGCTGATCGCTCATCTTACTGATATGTTTCCT
AATTATAAAGAGGAGTCCCCGCCTATTGGTGATCTGCAGGCTTTCTACAAACAATCAAAG
AAAAGATTTGACGATGATCCCGAGTTTAAGAAACGAGCGTATAGTTGCGTGGTGAAGCTA
CAAAGTGGTGACCCTGACTTTATTAATGCTTGGAAACTTATATGTGATGTTTCAAGGAAG
GAGTTTCAAGTCATCTATGATAGACTGGGGATCGTTAATTTGATTGAGCGAGGAGAATCT
TTTTACCATAACCTCATGCCTCCCGTTATTGCAGAGATAGAGAAACAAGGCTATGTTGTG
GTCGAAGACGGAAGGAAACTTGTTTTTCCGGAAGGTTCCCAGTTTCCCCTCACGATAGTG
AAGTCAGATGGTGGATTCACTTACGATACGAGTGACTTAGCTTGTATAAAACAACGTATA
TTTGATGAAAGTGGAGCCAACCTCATCTATGTGACGGATGCAGGGCAAGCTGCTCACTTC
AAAGCTATATATTCTGTGGCTAGAAAGATGGGTTGGTATGACCCACAAGTTACAAGGGTA
GAACATGTTGCATTCGGGGTCGTACTGGGGGAAGATAGGAAGAAATTTAAGACACGATCT
GGTGAAACTGTAAGATTAGCGGCGTTGCTGGATGAAGGGCGGAAGAGGTGTGAGGAGAAA
CTTAAAGAGAAAGGAAGAGATAAAGAACTTACTCCAGAGGAGTTTAAAGCTGCTCAGGAA
GCTGTAGCATATGGTTGCATCAAGTATGCAGATCTATCTCATAACAGAATCAATGATTAT
GTTTTCTCCTTTGATAAAATGCTTGAAGATCGAGGCAACACTGCAGCTTATCTACTTTAT
GCTTACACAAGGATAAAGTCCATAGCTCGTGTTGCAAAAGTAAGTCGGGAAGAATTAAAA
GAAGCTGCGTCATCTTTCTATGATGATGATGGCTTACCACTAGAGCACGCTAAAGAGCTA
AAACTTGCTCGCTTCATAACTCGGTTCCCTGAAGTTTTACAACGAGTATGCGATGACCTC
GCCCCGCACACGCTGTGTGATTACCTCTATGAGTTGGCTACCGTGTACACAGAGTTCTAT
GATGTTTGCTACTGTGTAGAGAAAGATAGAAAAACAGGTGACGTCGTCAAGATACACAAA
CATCGACTTTTGCTTTGTGACGCAACAGTCGCCGTCATGGATCAATGCTTTAAAATTTTA
GGCATAAAACCCGTGCATAAAATGTAACCAAAGTTCCTGTTGGACAAAATTAAATACAAG
TTGCATTACATTTTTGGTAGCGGGCTTCGTCACCATAGGTTTAATGACATCACACTTTCT
TTTATGGCGTAATAGAGGATTTAAATACGGATTGGTAATGTGAATTTAATGGGAAACATT
TACGCTCAAGTTTCAAATGTTAATTATTATCAATATGTCAGACATTTATCCATTACTACG
TGTTGTTGCGCGCAGATGCTCAATTTTTTGGTGCGGAAATAAATGAGAATATACATGTA
| SUPERFAMILY |
Arg-tRNA-synth_N_sf (IPR036695) - T[101-215] 1.96E-18 |
| Gene3D |
Arg-tRNA-synth_N_sf (IPR036695) - T[104-216] 9.3E-25 |
| PANTHER |
Arg-tRNA-ligase (IPR001278) - T[105-700] 1.5E-244 |
| Hamap |
Arg-tRNA-ligase (IPR001278) - T[111-700] 23.464 |
| SMART |
Arg-tRNA-synth_N (IPR005148) - T[111-200] 4.6E-25 |
| Pfam |
Arg-tRNA-synth_N (IPR005148) - T[113-200] 1.1E-18 |
| TIGRFAM |
Arg-tRNA-ligase (IPR001278) - T[135-700] 3.0E-135 |
| Pfam |
ArgRS_core (IPR035684) - T[209-556] 2.6E-141 |
| Gene3D |
Rossmann-like_a/b/a_fold (IPR014729) - T[226-568] 4.2E-110 |
| PRINTS |
Arg-tRNA-ligase (IPR001278) - T[228-243] 2.1E-27 - T[243-259] 2.1E-27 - T[267-280] 2.1E-27 - T[410-431] 2.1E-27 |
| CDD |
ArgRS_core (IPR035684) - T[228-493] 2.60327E-75 |
| ProSitePatterns |
aa-tRNA-synth_I_CS (IPR001412) - T[236-247] . |
| SUPERFAMILY |
tRNAsynth_Ia_anticodon-bd (IPR009080) - T[564-700] 3.99E-31 |
| SMART |
DALR_anticod-bd (IPR008909) - T[570-700] 2.9E-31 |
| Pfam |
DALR_anticod-bd (IPR008909) - T[570-700] 7.7E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYRC_HUMAN | 58.37 % | 787 | 0 |
| SYRM_HUMAN | 29.931 % | 228 | 3.02E-66 |