- Transcript 'KH2012:KH.C14.177.v3...'
Transcript Model
Transcript Id
KH2012:KH.C14.177.v3.B.SL5-1
Possible name(s)
RARS; RARS2; ZFP42
Gene model
Location
KhC14 [4,210,651 / 4,223,233]
Amino acid sequence
Length: 668
>KH.C14.177.v3.B.SL5-1
EKEAAELKKELEALENGSYVLKEEEMSEKSLKLMASNAKLAYQATHLQRALDAEVSQQRV
PEFTQQTTNFNDGMVNINQRLTEIFLHSISASFPGLKGKLPVSITLNQNEKFGDYQCNSA
MPISGVLKAQGTKMAPRQIAELILKNLPSSDLIDSCNIAGPGFINIRLNVSFLKRALSDV
LVHGVRTHHSKGECGKVVIDYSSPNIAKEMHVGHLRSTIIGDCIANLFEYFGHEVLRVNH
VGDWGTQFGMLIAHLTDMFPNYKEESPPIGDLQAFYKQSKKRFDDDPEFKKRAYSCVVKL
QSGDPDFINAWKLICDVSRKEFQVIYDRLGIVNLIERGESFYHNLMPPVIAEIEKQGYVV
VEDGRKLVFPEGSQFPLTIVKSDGGFTYDTSDLACIKQRIFDESGANLIYVTDAGQAAHF
KAIYSVARKMGWYDPQVTRVEHVAFGVVLGEDRKKFKTRSGETVRLAALLDEGRKRCEEK
LKEKGRDKELTPEEFKAAQEAVAYGCIKYADLSHNRINDYVFSFDKMLEDRGNTAAYLLY
AYTRIKSIARVAKVSREELKEAASSFYDDDGLPLEHAKELKLARFITRFPEVLQRVCDDL
APHTLCDYLYELATVYTEFYDVCYCVEKDRKTGDVVKIHKHRLLLCDATVAVMDQCFKIL
GIKPVHKM
Nucleotide sequence
Length: 2,279
>KH2012:KH.C14.177.v3.B.SL5-1
GAGAAAGAAGCCGCGGAACTGAAGAAAGAACTGGAAGCATTAGAGAATGGAAGTTATGTT
TTAAAGGAAGAAGAAATGAGCGAAAAAAGCTTGAAACTGATGGCTAGCAATGCAAAGTTG
GCGTACCAGGCTACACACTTACAAAGGGCATTAGATGCTGAAGTATCACAGCAACGAGTG
CCAGAGTTCACCCAGCAAACCACAAACTTCAACGACGGGATGGTAAACATCAACCAAAGG
TTGACAGAAATATTTCTTCACTCAATATCTGCAAGTTTCCCTGGTTTGAAGGGGAAACTC
CCTGTTTCGATAACTTTGAACCAAAATGAGAAGTTTGGAGATTATCAATGTAACAGTGCA
ATGCCAATATCTGGGGTTCTAAAAGCCCAGGGAACGAAAATGGCTCCACGTCAAATTGCG
GAATTAATTTTAAAGAACCTTCCCTCATCTGATCTAATAGATAGTTGCAACATTGCGGGA
CCAGGATTTATAAATATTCGATTAAATGTTTCTTTCCTGAAGAGGGCGCTGTCTGATGTT
TTAGTCCATGGGGTGCGGACACATCATTCTAAAGGAGAATGTGGGAAGGTAGTGATCGAT
TATTCTTCACCAAACATCGCAAAAGAAATGCACGTCGGCCATTTACGATCCACCATTATT
GGTGATTGCATCGCTAATCTCTTTGAATACTTTGGTCACGAAGTACTTAGAGTTAACCAT
GTAGGGGATTGGGGAACCCAGTTTGGGATGCTGATCGCTCATCTTACTGATATGTTTCCT
AATTATAAAGAGGAGTCCCCGCCTATTGGTGATCTGCAGGCTTTCTACAAACAATCAAAG
AAAAGATTTGACGATGATCCCGAGTTTAAGAAACGAGCGTATAGTTGCGTGGTGAAGCTA
CAAAGTGGTGACCCTGACTTTATTAATGCTTGGAAACTTATATGTGATGTTTCAAGGAAG
GAGTTTCAAGTCATCTATGATAGACTGGGGATCGTTAATTTGATTGAGCGAGGAGAATCT
TTTTACCATAACCTCATGCCTCCCGTTATTGCAGAGATAGAGAAACAAGGCTATGTTGTG
GTCGAAGACGGAAGGAAACTTGTTTTTCCGGAAGGTTCCCAGTTTCCCCTCACGATAGTG
AAGTCAGATGGTGGATTCACTTACGATACGAGTGACTTAGCTTGTATAAAACAACGTATA
TTTGATGAAAGTGGAGCCAACCTCATCTATGTGACGGATGCAGGGCAAGCTGCTCACTTC
AAAGCTATATATTCTGTGGCTAGAAAGATGGGTTGGTATGACCCACAAGTTACAAGGGTA
GAACATGTTGCATTCGGGGTCGTACTGGGGGAAGATAGGAAGAAATTTAAGACACGATCT
GGTGAAACTGTAAGATTAGCGGCGTTGCTGGATGAAGGGCGGAAGAGGTGTGAGGAGAAA
CTTAAAGAGAAAGGAAGAGATAAAGAACTTACTCCAGAGGAGTTTAAAGCTGCTCAGGAA
GCTGTAGCATATGGTTGCATCAAGTATGCAGATCTATCTCATAACAGAATCAATGATTAT
GTTTTCTCCTTTGATAAAATGCTTGAAGATCGAGGCAACACTGCAGCTTATCTACTTTAT
GCTTACACAAGGATAAAGTCCATAGCTCGTGTTGCAAAAGTAAGTCGGGAAGAATTAAAA
GAAGCTGCGTCATCTTTCTATGATGATGATGGCTTACCACTAGAGCACGCTAAAGAGCTA
AAACTTGCTCGCTTCATAACTCGGTTCCCTGAAGTTTTACAACGAGTATGCGATGACCTC
GCCCCGCACACGCTGTGTGATTACCTCTATGAGTTGGCTACCGTGTACACAGAGTTCTAT
GATGTTTGCTACTGTGTAGAGAAAGATAGAAAAACAGGTGACGTCGTCAAGATACACAAA
CATCGACTTTTGCTTTGTGACGCAACAGTCGCCGTCATGGATCAATGCTTTAAAATTTTA
GGCATAAAACCCGTGCATAAAATGTAACCAAAGTTCCTGTTGGACAAAATTAAATACAAG
TTGCATTACATTTTTGGTAGCGGGCTTCGTCACCATAGGTTTAATGACATCACACTTTCT
TTTATGGCGTAATAGAGGATTTAAATACGGATTGGTAATGTGAATTTAATGGGAAACATT
TACGCTCAAGTTTCAAATGTTAATTATTATCAATATGTCAGACATTTATCCATTACTACG
TGTTGTTGCGCGCAGATGCTCAATTTTTTGGTGCGGAAATAAATGAGAATATACATGTA
| SUPERFAMILY |
Arg-tRNA-synth_N_sf (IPR036695) - T[69-183] 1.83E-18 |
| Gene3D |
Arg-tRNA-synth_N_sf (IPR036695) - T[72-184] 8.6E-25 |
| PANTHER |
Arg-tRNA-ligase (IPR001278) - T[73-668] 1.4E-244 |
| Hamap |
Arg-tRNA-ligase (IPR001278) - T[79-668] 23.464 |
| SMART |
Arg-tRNA-synth_N (IPR005148) - T[79-168] 4.6E-25 |
| Pfam |
Arg-tRNA-synth_N (IPR005148) - T[81-168] 1.0E-18 |
| TIGRFAM |
Arg-tRNA-ligase (IPR001278) - T[103-668] 2.5E-135 |
| Pfam |
ArgRS_core (IPR035684) - T[177-524] 2.3E-141 |
| Gene3D |
Rossmann-like_a/b/a_fold (IPR014729) - T[194-536] 3.7E-110 |
| CDD |
ArgRS_core (IPR035684) - T[196-461] 1.9533E-75 |
| PRINTS |
Arg-tRNA-ligase (IPR001278) - T[196-211] 1.8E-27 - T[211-227] 1.8E-27 - T[235-248] 1.8E-27 - T[378-399] 1.8E-27 |
| ProSitePatterns |
aa-tRNA-synth_I_CS (IPR001412) - T[204-215] . |
| SUPERFAMILY |
tRNAsynth_Ia_anticodon-bd (IPR009080) - T[532-668] 3.66E-31 |
| SMART |
DALR_anticod-bd (IPR008909) - T[538-668] 2.9E-31 |
| Pfam |
DALR_anticod-bd (IPR008909) - T[538-668] 7.2E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYRC_HUMAN | 58.683 % | 784 | 0 |
| SYRM_HUMAN | 29.931 % | 228 | 2.14E-66 |