- Transcript 'KH2012:KH.C14.43.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S64...' >
- Transcript 'KH2012:KH.C2.712.v1....' >
- Transcript 'Cisavi.CG.ENS81.R83....' >
- Transcript 'KH2012:KH.C14.200.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.200.v1.B.nonSL2-1
Possible name(s)
ATRX; RAD54L; RAD54L2
Gene model
Location
KhC14 [613,033 / 638,837]
Amino acid sequence
Length: 1,928
>KH.C14.200.v1.B.nonSL2-1
LKIVTYTNKQCFTLNSLTLIVRYCTHVMENECVVVEPEGLPKDKFIGPEFSTYICSQTGS
KKRTVNSRGSSNHAAGTTEPSILDKVIRCTGCGEQILTHLSSNANEHPVLHVLLCKRCYS
YYHSGTFQKDENGIDEFCRWCGDGGDVIMCDSCTNVFCKTCIRRNFSRKKANEIFTSDTV
QCFVCDLTPLQSLIQECKEVLEAFNTNRAPVVVKKKHRRAAIEENKSNGVIPSPETTTTI
KKIDHPVVGRHKTTDTVNISNIRSECMTIVDDTCSKVGELHSLFKQVFSNDTEDQRKVAL
TKLRTINQIKSKLNDLVGLSSDFYESVCKEEKQLQARISHESTDDSMTTSKETDDLDSTN
TNLSTPSRKKKLLKRKFRENILRNSNSPAGKTWRKLHMDESQEDKSNNEASDKELSKYIP
IKLKLDDQCSDKQALGGVSVSDIFHEEASDSDCSGLFKPRKIKRQSSNKSDSQKKESPVE
KKIKKGGKNDKEAEDQSPGAKTTSSDLDELIPKKKKKEKEASDSENSDPESLEKPSTKKK
TDQKKEKPKIHKTDRPSLDFSSDSSQTEIESNNMETFSDDQLDMTIEDQAPKVDPPPKEV
SENDAARAGIQKIMEDEMSESSLDEDVKDLLDQKKDGDKKHETKKKDENDPQDAAKEQDD
AKEDGSDDAQSGGDESTKKTKIKNALLREALSPTKDSSTRGSAKRKLSDAAVKATPRSKK
VRRSLICDEALIGSNLNEEDKQILLNKDANDDGDLSDLSNILQSSDADVTDVNEDPQTDE
KNASDCSHSTKLSTTSSERLQVVVGKEEKEKCEAALQEKGKGGSKEEKEKGEEKKSEEEK
SENEKSDVEDKNKEKKEEKKEERENKIKEEVLKSDAEMECITIESDSHDENVGSKSKKIT
SMSSDSDEDVGFKPKKKQKGQTWLDDFYKVEDVSDDGVGSIKKEAQTRSYNKVKKRRRIK
DSGSEDSNKDSMDDFHDSGKKMGRRNIRKILDNTNLSKMTQDAEKMEKARRKRLEQDQDL
EEEVIIIDDEASPQKKKKVTTHLVLSKKPLVEVESAILRALKPHQVEGIKFLWRNVIESV
ARANKSRGDGCILAHCMGLGKTLQVVAFLHTVLHSPHLPKQRTALVVCPLGTVLNWAREF
DMWTRPCKQSMETYSIMDNKSLHDRAIILKRWHKRGGVLVTGYKMFMTMVTITRKQYSRY
NKSFIEMMLDPGPDIVVCDEGHIIKNEATNLSNVMSRIKTRRRLVLTGTPLQNNLMEYYC
MVNFIKPRLLGSAQEFNNRFTHPIRNGQHVDSTERDVKLMKKRSHVLHELLAGCVQRKDV
NCLREQLMPKHEYVLFVRLTPVQIRLYEQYLSTFQCGDVGNRKGQLFQDFKNLLLIVCHP
KALLLDKIRRENQQNAEEAREDIRSFLNDEDETSEEDLEGEEPPSDDMSKISSMSVQDLK
KLILSKGGSLQDCLEKKDLLQRAKDLLTTSATDDPTKELWFEKVMPSDNLLYDSVEMSGK
ITLLLSILKSSTMMGDKVVLFSQSLLTLDLIEDILRYVTMDGSDNTRSPTGVRIMKWYKD
VDYYRMDGSTKNERRKTIIDQFNNESDTRCRLMLVSTRAGGIGINLVGANRAIVFDASWN
PTHDVQSIFRIYRFGQTKPCYIYRFIAQGTMEEKIYDRQVVKQSLASRVVDEQQIERHYT
ANDIAELYTFKPERLTKETIKSRPTPIKPKDQLLSDILLDPKSRDLIVSYHEHDSLLGHQ
ADEELSEADRRNAWDEYDRERFPPVPHDSPLLKLGIATIKQLIDIAEKELEKNTKQLDNC
KPETLDQIMLKVKYLNRSLKIEHAEKCAHEIQLYKLSVRPQIERTRSYILRKLEQLRFCQ
QRVKASNVNPRVQNQPNGLYNLPPYVPRPNPQSSTFRPPHPNYPRNFAQHQQFYPRNPRF
SSFTHVPR
Nucleotide sequence
Length: 6,181
>KH2012:KH.C14.200.v1.B.nonSL2-1
ACTAAAAATAGTTACGTATACAAATAAACAATGCTTTACTTTAAATAGTCTTACTCTTAT
TGTACGTTATTGTACGCATGTCATGGAGAATGAATGTGTAGTCGTTGAGCCAGAAGGTTT
ACCAAAAGATAAGTTTATTGGACCAGAATTTTCAACTTATATTTGCTCACAAACTGGGTC
AAAGAAAAGAACGGTTAACAGCAGAGGTTCCAGCAATCATGCTGCAGGTACAACCGAACC
TTCAATATTGGATAAAGTGATTCGTTGCACTGGTTGTGGGGAACAGATTCTTACTCATCT
ATCAAGCAATGCCAACGAACACCCTGTGCTACATGTACTCTTGTGCAAGCGATGCTATTC
TTATTATCACTCTGGTACGTTCCAAAAAGATGAAAATGGAATTGATGAATTCTGTCGTTG
GTGCGGGGACGGGGGGGATGTTATCATGTGTGATAGTTGTACCAATGTATTTTGCAAGAC
TTGCATTAGACGGAACTTCAGCCGGAAAAAAGCGAATGAAATATTTACTTCCGATACAGT
ACAATGTTTTGTATGCGATCTTACACCTTTGCAGTCACTTATACAAGAATGCAAAGAAGT
CTTGGAAGCCTTTAATACAAACAGAGCACCTGTAGTAGTTAAAAAGAAACACAGGCGAGC
AGCAATTGAAGAAAACAAATCAAATGGTGTCATTCCGTCACCAGAAACTACAACTACTAT
AAAGAAGATTGACCATCCTGTTGTAGGCCGCCACAAAACAACGGACACCGTTAACATTAG
TAATATTCGTTCTGAGTGTATGACAATAGTAGATGACACGTGCAGTAAAGTTGGTGAACT
TCACTCTTTGTTTAAACAAGTGTTTAGCAATGACACAGAAGACCAAAGAAAAGTGGCTTT
AACGAAGCTTCGAACAATCAACCAAATTAAATCAAAGCTGAATGACCTGGTGGGCTTGTC
ATCCGATTTTTATGAGTCTGTCTGCAAAGAAGAAAAACAACTTCAAGCAAGAATATCTCA
TGAAAGCACAGATGACTCCATGACAACCAGCAAAGAAACGGATGATTTAGATTCCACTAA
CACCAATCTCTCTACACCAAGCAGAAAGAAAAAGTTGCTAAAACGGAAATTTCGGGAAAA
CATTCTTCGTAACTCCAACTCTCCTGCTGGTAAAACATGGAGGAAATTGCACATGGATGA
ATCGCAGGAGGATAAAAGCAACAATGAAGCGTCAGATAAAGAACTATCTAAATATATTCC
AATCAAACTAAAGTTGGATGACCAGTGTTCTGATAAACAGGCACTTGGAGGGGTAAGTGT
CAGCGATATCTTCCATGAGGAGGCGAGTGATTCTGATTGCTCCGGACTTTTTAAACCACG
GAAGATAAAAAGACAATCCTCAAATAAATCTGATTCACAAAAGAAAGAATCGCCAGTCGA
AAAAAAGATTAAAAAGGGAGGTAAAAATGATAAAGAGGCAGAAGATCAAAGTCCTGGAGC
AAAAACAACCTCATCTGACTTGGATGAACTAATACCCAAGAAGAAAAAGAAGGAAAAAGA
AGCTTCTGATTCTGAAAATTCTGATCCGGAAAGTTTGGAAAAACCGAGTACAAAAAAGAA
AACTGACCAAAAAAAAGAAAAACCTAAAATCCACAAGACGGATCGGCCATCTTTGGATTT
TTCATCCGATTCCTCTCAGACCGAGATTGAAAGCAACAACATGGAAACTTTCTCCGATGA
TCAGCTTGACATGACAATTGAAGATCAAGCTCCCAAAGTTGATCCCCCTCCCAAAGAAGT
AAGTGAGAATGATGCAGCAAGAGCTGGCATCCAGAAGATCATGGAAGATGAGATGTCCGA
GAGCTCCTTGGATGAAGATGTGAAGGATCTGTTGGATCAAAAGAAAGATGGAGACAAAAA
ACATGAAACCAAGAAGAAAGATGAGAATGATCCTCAGGATGCTGCAAAAGAACAGGATGA
TGCAAAAGAAGATGGTTCAGATGATGCACAAAGTGGAGGAGATGAATCAACTAAAAAAAC
GAAGATCAAAAATGCATTGCTTCGAGAAGCACTTTCACCAACAAAAGATAGCTCCACGAG
AGGTTCTGCCAAGAGAAAGTTATCTGATGCTGCAGTGAAAGCCACACCACGTAGTAAAAA
AGTACGAAGGTCTCTGATTTGTGATGAAGCTCTCATTGGTTCAAACCTTAATGAGGAAGA
TAAACAAATTCTCCTCAACAAAGATGCAAATGATGATGGTGATCTCTCGGACCTAAGCAA
CATCCTTCAATCTTCAGATGCGGATGTAACTGATGTAAATGAAGACCCCCAAACAGATGA
GAAAAATGCCAGCGATTGTAGCCACTCCACGAAATTATCAACAACAAGTTCCGAAAGATT
GCAAGTTGTTGTTGGAAAAGAGGAGAAAGAGAAGTGTGAGGCCGCTCTTCAGGAAAAAGG
GAAAGGTGGGAGCAAAGAAGAGAAAGAAAAGGGTGAGGAGAAAAAGAGCGAAGAGGAAAA
AAGTGAGAATGAGAAGAGTGATGTTGAAGACAAAAATAAAGAGAAAAAGGAAGAGAAAAA
AGAAGAAAGAGAGAACAAAATAAAAGAAGAAGTTTTAAAGAGTGATGCAGAGATGGAATG
CATCACGATAGAGAGCGATTCCCATGATGAAAATGTTGGAAGCAAATCCAAGAAGATCAC
ATCGATGAGTAGCGACTCTGATGAGGATGTTGGGTTTAAACCGAAAAAAAAACAGAAAGG
TCAAACGTGGTTGGACGATTTCTATAAAGTAGAAGATGTTTCAGATGATGGTGTTGGTTC
TATTAAAAAAGAAGCCCAGACGCGGTCGTACAACAAAGTAAAAAAACGACGTCGAATAAA
AGATTCTGGGAGTGAGGATTCAAACAAAGACAGCATGGATGATTTCCATGACAGCGGGAA
GAAGATGGGTCGTCGCAACATCCGGAAGATCTTGGATAATACGAACCTTAGTAAGATGAC
ACAGGATGCAGAGAAGATGGAGAAAGCTAGGAGGAAGAGGTTGGAGCAAGATCAGGATCT
GGAGGAGGAGGTTATTATAATTGACGACGAAGCTTCTCCACAGAAGAAGAAGAAAGTGAC
GACTCATCTTGTGTTGTCTAAAAAACCACTTGTTGAGGTTGAATCTGCGATTTTACGAGC
CCTCAAGCCCCACCAAGTGGAAGGAATAAAATTTCTATGGCGTAATGTTATTGAGAGCGT
TGCACGTGCCAATAAATCAAGAGGAGATGGCTGCATACTCGCTCACTGTATGGGCTTGGG
AAAAACGCTGCAGGTTGTAGCATTCTTGCACACTGTTCTTCATTCACCACACTTGCCTAA
ACAAAGAACAGCTCTAGTTGTGTGCCCACTTGGTACAGTGCTTAACTGGGCAAGGGAGTT
TGATATGTGGACACGGCCATGCAAACAATCAATGGAGACCTATAGTATAATGGACAACAA
GTCTTTGCATGATCGTGCCATCATACTCAAGAGATGGCACAAAAGAGGAGGTGTTTTAGT
CACTGGTTATAAGATGTTTATGACCATGGTTACCATCACTAGGAAGCAATATTCGCGTTA
CAATAAATCCTTCATTGAAATGATGTTGGATCCGGGTCCAGACATTGTTGTTTGTGATGA
AGGTCATATTATTAAGAATGAAGCAACGAATTTAAGCAATGTCATGTCGCGGATCAAGAC
TCGACGTAGATTAGTTCTCACAGGAACACCTTTACAAAACAACCTTATGGAATATTACTG
TATGGTTAATTTTATTAAACCCAGACTGCTCGGCAGCGCACAGGAGTTTAACAATCGATT
CACTCACCCGATACGCAACGGGCAACACGTGGATTCAACGGAACGCGACGTGAAACTCAT
GAAGAAAAGGTCGCATGTCTTGCATGAACTACTTGCTGGTTGCGTGCAAAGGAAAGACGT
AAACTGCTTACGAGAACAATTGATGCCAAAACATGAATACGTGCTTTTTGTCCGTCTTAC
TCCCGTACAGATTCGTTTATACGAACAATACCTTTCAACTTTCCAATGTGGGGACGTGGG
AAACAGAAAAGGACAACTTTTTCAAGATTTCAAAAACCTCTTATTGATTGTGTGTCATCC
TAAAGCTTTGCTGCTGGATAAAATTCGCCGCGAAAATCAACAGAATGCAGAGGAAGCTCG
TGAAGATATTCGATCTTTCCTTAATGATGAGGACGAGACATCCGAGGAGGACTTGGAGGG
TGAAGAACCTCCATCGGATGATATGAGTAAAATATCATCCATGTCCGTGCAGGATTTAAA
GAAACTAATTCTTTCAAAAGGAGGTAGTTTACAAGATTGTTTGGAAAAGAAAGATTTACT
TCAGCGAGCTAAAGACCTGCTAACTACTTCTGCAACAGACGACCCCACCAAAGAACTGTG
GTTTGAAAAAGTGATGCCGAGTGACAACTTGCTTTATGATTCTGTGGAAATGAGTGGCAA
GATAACTTTGCTATTAAGCATATTAAAGTCTTCAACGATGATGGGCGACAAAGTTGTTTT
ATTTTCCCAATCATTGCTAACACTAGATCTCATTGAAGATATCCTTCGTTATGTTACAAT
GGATGGGAGCGATAACACACGTTCACCAACTGGTGTTCGAATAATGAAATGGTACAAAGA
CGTTGATTATTATCGGATGGATGGTTCTACAAAAAACGAGCGAAGAAAGACGATCATTGA
CCAGTTTAACAATGAATCGGACACTAGGTGTCGCCTCATGTTGGTTTCCACAAGAGCTGG
AGGTATTGGAATAAATCTGGTGGGGGCAAACAGAGCAATCGTGTTTGACGCGTCCTGGAA
CCCAACACACGACGTCCAATCTATTTTCCGCATCTATCGTTTTGGACAAACTAAACCATG
TTATATATATCGCTTCATCGCCCAAGGAACGATGGAAGAAAAAATCTATGATCGCCAGGT
TGTGAAGCAATCTTTGGCATCCAGAGTGGTAGACGAGCAGCAAATAGAACGTCATTACAC
GGCAAACGATATTGCGGAACTTTATACTTTTAAACCTGAACGCTTAACGAAAGAAACGAT
CAAGTCACGACCTACGCCCATCAAACCAAAAGACCAATTGTTGTCGGATATATTATTGGA
TCCCAAGTCACGTGATCTGATTGTATCGTACCACGAGCATGATTCGTTGTTGGGACATCA
GGCTGACGAAGAGCTAAGTGAGGCAGATCGACGCAACGCATGGGACGAGTATGACCGTGA
GAGATTCCCCCCCGTTCCCCACGATAGTCCGCTACTAAAACTTGGTATTGCAACCATTAA
ACAACTGATCGACATTGCTGAAAAAGAACTTGAGAAAAATACAAAACAACTGGATAATTG
TAAGCCAGAAACACTGGACCAAATCATGCTAAAAGTGAAGTATTTAAACCGATCGTTGAA
GATAGAACACGCTGAGAAATGCGCTCATGAAATACAACTTTATAAACTTTCTGTTAGGCC
ACAAATTGAACGAACTAGAAGTTATATACTACGGAAATTGGAACAGCTGCGTTTCTGTCA
GCAACGGGTAAAAGCGAGTAATGTTAACCCAAGAGTGCAAAACCAACCGAACGGATTATA
CAACCTCCCACCCTATGTTCCAAGGCCTAACCCACAAAGTTCAACGTTCAGACCACCGCA
CCCTAATTACCCAAGAAACTTTGCCCAACACCAACAATTCTACCCAAGAAACCCGCGTTT
TTCTTCGTTCACACACGTCCCGCGTTAACACTTAGAAACCCCACATTTTTTTACGTTATT
TTTTTTCAGTGGTACTTTTTTTCAATTTTTTTAGTGAGACCAACAGATATACCTACTGCT
AGGGTATATGGTCGTAACAGCTTCAATGTGAAACCTCACTACAAATTTAACTACAGTTCT
TCACAGGTGATATGTCTGTTTAGACTATTTACCTACAGCGAACATATACATAATAGGCCG
GAAATAATATTTATTGTAACATGCAATAAATGGCCACGGATTTGTATCTCGTATACACTT
CATTCAACTTCTCATTTATATGAATTGTTTTAATAAGGCTAAAGCGCGCTGTGCAAATCT
TTTTCATGTCGTTTTACAATTTTGTTCAGTCGTACTACTTTATTACAATGACTTACACAA
T
| ProSiteProfiles |
ADD (IPR025766) - T[77-213] 13.456 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[127-196] 5.6E-7 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[1017-1317] 1.43E-50 - T[1214-1266] 4.3E-51 - T[1490-1679] 4.3E-51 |
| Gene3D |
SNF2-like_sf (IPR038718) - T[1024-1317] 4.6E-78 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[1057-1275] 1.5E-20 |
| Pfam |
SNF2_N (IPR000330) - T[1077-1352] 1.3E-53 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[1082-1268] 16.903 |
| CDD |
Helicase_C (IPR001650) - T[1498-1643] 2.21906E-19 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[1500-1683] 13.636 |
| Pfam |
Helicase_C (IPR001650) - T[1501-1635] 9.1E-13 |
| SMART |
Helicase_C (IPR001650) - T[1529-1635] 2.3E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATRX_HUMAN | 48.884 % | 407 | 6.34E-115 |
| ARIP4_HUMAN | 36.636 % | 466 | 1.91E-137 |
| RAD54_HUMAN | 29.624 % | 252 | 2.47E-70 |