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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S4...'
  2. Transcript 'Boleac.CG.SB_v3.S333...'
  3. Transcript 'KH2012:KH.C14.209.v1...'

Transcript Model

Transcript Id

KH2012:KH.C14.209.v1.A.nonSL1-1

Possible name(s)

RPL9

Location

KhC14 [1,675,063 / 1,678,097]

Sequences

Amino acid sequence

Length: 205

>KH.C14.209.v1.A.nonSL1-1
LFYVCSVVQSPHGTMKIIHSSQVVTLPDEVKVSVKGRVVTVRGPRGVLKKNFNHLKVELT
KVGTNSVKVDKWFGNRKDLACVRTICSHINNMATGVTKGYRYKMRSVYAHFPINCNITEE
GKKIEIRNFLGEKFVRRVDMRAGVKVVSSAKQKDELILDGNDIELVSLSAALIQQSTTVK
NKDIRKFLDGIYVSQKTTIVEDEAL

Nucleotide sequence

Length: 665

>KH2012:KH.C14.209.v1.A.nonSL1-1
CTCTTTTACGTGTGTAGTGTTGTGCAGAGCCCACACGGCACAATGAAGATCATACACTCA
AGTCAAGTTGTGACTTTGCCCGACGAAGTTAAAGTTAGTGTTAAAGGACGAGTGGTTACA
GTTCGTGGGCCAAGAGGTGTCCTAAAAAAAAATTTCAACCATTTAAAGGTTGAGTTGACA
AAAGTTGGTACCAACTCTGTAAAAGTTGACAAATGGTTCGGAAACCGTAAGGATCTCGCG
TGCGTTCGTACGATCTGCAGTCACATCAACAACATGGCCACTGGTGTCACCAAGGGTTAC
AGGTACAAGATGAGATCTGTATACGCTCACTTTCCTATCAACTGTAACATCACAGAAGAA
GGCAAGAAAATTGAAATCCGTAATTTCCTCGGTGAAAAGTTTGTGCGAAGAGTTGACATG
AGGGCTGGTGTGAAAGTAGTCTCCTCTGCCAAGCAAAAGGATGAACTTATTTTAGATGGA
AATGATATTGAATTGGTTTCTTTATCAGCTGCTCTCATCCAGCAATCCACCACCGTAAAG
AACAAGGACATCCGAAAGTTCTTGGACGGAATCTACGTCTCACAGAAGACGACCATAGTC
GAAGACGAAGCCTTATAAACCTCGTCTTATTAAAATCAAAAATACACGAGATTCCGCACT
TTTAA

InterProScan

PANTHER
Ribosomal_L6 (IPR000702) - T[15-202] 4.7E-90
SUPERFAMILY
Ribosomal_L6_a/b-dom_sf (IPR036789) - T[15-99] 1.53E-22 - T[100-196] 6.23E-29
PIRSF
Ribosomal_L6 (IPR000702) - T[15-199] 7.1E-32
Gene3D
Ribosomal_L6_a/b-dom_sf (IPR036789) - T[15-99] 1.1E-33 - T[100-204] 1.7E-45
Pfam
Ribosomal_L6_a/b-dom (IPR020040) - T[27-99] 7.7E-17 - T[111-190] 1.1E-12
ProSitePatterns
Ribosomal_L6_CS2 (IPR002359) - T[175-196] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL9_HUMAN 66.31 % 257 3.68E-88