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  1. Transcript 'KH2012:KH.C14.209.v1...'

Transcript Model

Transcript Id

KH2012:KH.C14.209.v1.A.nonSL5-1

Possible name(s)

RPL9

Location

KhC14 [1,675,065 / 1,678,097]

Sequences

Amino acid sequence

Length: 204

>KH.C14.209.v1.A.nonSL5-1
FYVCSVVQSPHGTMKIIHSSQVVTLPDEVKVSVKGRVVTVRGPRGVLKKNFNHLKVELTK
VGTNSVKVDKWFGNRKDLACVRTICSHINNMATGVTKGYRYKMRSVYAHFPINCNITEEG
KKIEIRNFLGEKFVRRVDMRAGVKVVSSAKQKDELILDGNDIELVSLSAALIQQSTTVKN
KDIRKFLDGIYVSQKTTIVEDEAL

Nucleotide sequence

Length: 663

>KH2012:KH.C14.209.v1.A.nonSL5-1
CTTTTACGTGTGTAGTGTTGTGCAGAGCCCACACGGCACAATGAAGATCATACACTCAAG
TCAAGTTGTGACTTTGCCCGACGAAGTTAAAGTTAGTGTTAAAGGACGAGTGGTTACAGT
TCGTGGGCCAAGAGGTGTCCTAAAAAAAAATTTCAACCATTTAAAGGTTGAGTTGACAAA
AGTTGGTACCAACTCTGTAAAAGTTGACAAATGGTTCGGAAACCGTAAGGATCTCGCGTG
CGTTCGTACGATCTGCAGTCACATCAACAACATGGCCACTGGTGTCACCAAGGGTTACAG
GTACAAGATGAGATCTGTATACGCTCACTTTCCTATCAACTGTAACATCACAGAAGAAGG
CAAGAAAATTGAAATCCGTAATTTCCTCGGTGAAAAGTTTGTGCGAAGAGTTGACATGAG
GGCTGGTGTGAAAGTAGTCTCCTCTGCCAAGCAAAAGGATGAACTTATTTTAGATGGAAA
TGATATTGAATTGGTTTCTTTATCAGCTGCTCTCATCCAGCAATCCACCACCGTAAAGAA
CAAGGACATCCGAAAGTTCTTGGACGGAATCTACGTCTCACAGAAGACGACCATAGTCGA
AGACGAAGCCTTATAAACCTCGTCTTATTAAAATCAAAAATACACGAGATTCCGCACTTT
TAA

InterProScan

PANTHER
Ribosomal_L6 (IPR000702) - T[14-201] 4.6E-90
PIRSF
Ribosomal_L6 (IPR000702) - T[14-198] 7.4E-32
Gene3D
Ribosomal_L6_a/b-dom_sf (IPR036789) - T[14-98] 1.1E-33 - T[99-203] 1.6E-45
SUPERFAMILY
Ribosomal_L6_a/b-dom_sf (IPR036789) - T[14-98] 1.51E-22 - T[99-195] 6.23E-29
Pfam
Ribosomal_L6_a/b-dom (IPR020040) - T[26-98] 7.6E-17 - T[110-189] 1.1E-12
ProSitePatterns
Ribosomal_L6_CS2 (IPR002359) - T[174-195] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL9_HUMAN 66.31 % 257 3.18E-88