Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C14.240.v2.A.SL2-1

Possible name(s)

CCR4; CX3CR1; GPR15

Gene model

KH2012:KH.C14.240

Location

KhC14 [197,700 / 200,330]

Sequences

Amino acid sequence

Length: 213

>KH.C14.240.v2.A.SL2-1
FLYPSLKIYHVIACVIAFLVALLIVLVMCVGTIHRTGGLAAILPYRIHLSLLRRNRRKKK
DETDDTAGAMALHRKHSIQLSYMRNMTHFILSVSIVYVVCRFPANIVLLLDSLQIPITIS
PVGLAAIGTIAFSHSLLNPIVFYVTLQPMRKAVHHLFQPCCTRTIETKRGTTTTDPTNTN
ITSALAQNRKRSQLSARISVVSTISINQNETTF

Nucleotide sequence

Length: 1,684

>KH2012:KH.C14.240.v2.A.SL2-1
CTTTCTCTACCCTTCGTTGAAGATATACCACGTGATCGCTTGCGTCATTGCCTTCCTCGT
AGCTTTGCTGATAGTTCTCGTTATGTGTGTTGGGACCATACATCGAACGGGGGGGCTGGC
CGCCATCTTACCTTACAGAATTCATCTAAGTTTGCTCAGAAGAAACAGAAGAAAGAAAAA
AGATGAGACCGACGACACAGCTGGTGCAATGGCGCTTCATAGAAAACATTCGATACAACT
TTCGTACATGAGAAACATGACGCACTTTATCCTATCCGTGTCAATAGTGTACGTGGTTTG
CAGATTCCCAGCTAATATTGTTCTTCTGTTGGATTCCCTCCAAATACCAATAACAATATC
ACCTGTTGGGCTTGCGGCCATTGGAACAATTGCTTTCTCCCACTCGCTACTTAACCCAAT
TGTGTTCTACGTTACATTACAACCAATGCGAAAAGCGGTCCATCATCTTTTCCAACCATG
TTGTACTAGAACCATTGAAACGAAGAGGGGAACCACCACAACTGATCCCACAAACACAAA
CATAACATCAGCGTTGGCTCAAAACAGAAAGCGTTCACAACTTAGTGCGCGCATAAGTGT
AGTGTCCACCATTTCGATTAATCAGAACGAAACTACGTTTTAAACTGGATGGGGAAAATG
GGAAACAACATGGCCTGCTATATGCTATGGTGGGAAAAGATGGAACACCTTTAGCACATA
GCATCCAAATATCATGGCCGTGTTTTAAACAATTACCAACGGTCTATGGGAGTCGTGAGG
ATACGGTTTTAAAATTCTTTGAATGTTCTTTGTTTATTACCAAATTGAACGAGAAAATAG
AATGAAAAGTGTCCCATCCTCCCACCCTACTATATTATAGATGCCAAATATAGAGACAAA
GACATGAAGTTCATTAATGACAATAATTGACTATTATAGTGAGGTGGGGAAGATGGGGCA
CCTTTAAGCACAACATATCCCAATATCTTGATCGTGTTTTAAATAATAATTAACAACGCT
CGTTTAGGTTCGCAGGGCTACGGTTATATAATTCTGTGAATGTTCTTTGTGTACTACCAA
TTGGAACGAGAAAACAGAACGAAAATATGTCCCATCTTAACCCACCCTACTTTGAGTTTA
CTTTTCTGCCTCAATCTTTAAATGTCCGTGTTTTATCGGGCAGTCACATGACCACTTATC
ACCTATATTGATAGATTAATGTGAAGTCACATCGGTACTACCTCTAACGTTATCACACGC
AAGGAAGAAGTAGGTCACACATCCGTTAGTTACTGTGGGCTTTCACAGCAGTAACATCTG
GTTAACTTTTGTTGTTTTTGCAAGTTTCTAAGACAGCTGATTAAATTAAACAATTAGACT
GTCCCAGGGCCTGTTAAGTTTTTGAATACGGGTCACGCACCGATTATAGCACGTCAATAG
CCTCTGGCTAAAACCACTAAAAATGTTTTGAAACAAAACATAATATCGCCAAATGAGTTC
TCAAAAACGTATTTATACACACCTTATAACCGTGTTATAATAATTTGTGTCCATTTATTA
AAGCTTAGCTCTCTCGTTGTTTTGTTTATTATTTAATATTGTAATAGAAATACACAGTGG
TTGGCTGATTTTGGCAAATGTTTTGAATTCGTTACCATAAATAAAATGTCGAAATGCAAC
TTTG

InterProScan

ProSiteProfiles	GPCR_Rhodpsn_7TM (IPR017452) - T[1-142] 11.264
Pfam	GPCR_Rhodpsn (IPR000276) - T[8-141] 1.1E-7
PRINTS	GPCR_Rhodpsn (IPR000276) - T[10-33] 9.7E-5 - T[86-110] 9.7E-5 - T[124-150] 9.7E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value