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- Clone 'AHC0AAA242YH13' >
- Transcript 'KH2012:KH.C6.108.v2....' >
- Transcript 'KH2012:KH.C1.429.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.429.v1.A.nonSL3-1
Possible name(s)
GPC3; GPC4; GPC5
Gene model
Location
KhC1 [3,662,323 / 3,671,533]
Amino acid sequence
Length: 711
>KH.C1.429.v1.A.nonSL3-1
RVWIQNQKPLTMTIVVSAIIFLSAFEVVRSGGETCGEVRRTFRTRALGPADMVPIMPAEV
TGLSVCQSVGPTCCTPSMEEKYMEASVRELRELVKRKTTPLEKHFRAIAKKFRGYWNQMV
KRARSQGINEGTNTSHLERFYDGLLIPSKARLSSFNATKNLNGILSSLFILSLEDEIGLK
IPKEKIECALTKATSYLTPYAVLKSKFENLLNPVGVFLKALTVGLRAAEVSRRIATGGPC
IDAITKMRYCSHCYGYTLIKTCPGLCHNVVRGCLVGMAELDMFWKYYIVSINNMANKLVN
TEGGFDVYFPQILRNISLIVQSVTYNQESVTLILQQCKIHPERVARSLDRLPIADADELN
ELRTALASRKRRRRHRNRPDRKPRAEPRRGRQSRDRKNRNIDLHLKSRSLLELSRDRVRP
PFEMLLEDSSLPNIPLPTREKMVRKKKNPMVDEMKIPTSLKFGLSNHITRFADELNTTRD
FFASFSDDLCSSSDPVSFQVSNYGHCWDGVKMANSYKKPTPDKGIEGQLQNPEVKVVTLK
RDVQTIIEDVRTITKELMKSSGSEQIPSDLLQRPSYITSHLQTDEIPCDDEDECFDNGSG
EQSGEDPDVIRPDKPSLSLEKIPFPIAKTNTSIKRADQVTSTTSFTLVFNNEATMPAIVV
GIAKEQNKSNISLSTSRQSGGGHGYASQLKSRKLYDILLCVVFSILIAQGA
Nucleotide sequence
Length: 2,516
>KH2012:KH.C1.429.v1.A.nonSL3-1
ATTCACCAGGGACTGACAGAACAGTAACGTTTTATATTAAATAATCTACAGGTTGAATGT
GTTACGCTGTTACGAGGGAGTAAAGTCGACCATTTAAAGTTACTTGCGTCGGGCCGAGAG
AGTTCATTCTACGAGCATACGAAGACAATGTACAGCTGCAACTAAGACGTATACGTCACA
TCAGCATTGGTGCTTGGTTAGAAAGTAAAGAGTGTGGATTCAAAATCAGAAACCATTAAC
AATGACAATAGTTGTTAGTGCAATAATATTCTTGTCAGCGTTTGAAGTTGTTCGCAGTGG
GGGCGAAACTTGTGGTGAAGTCCGACGAACCTTTAGAACTCGTGCGTTAGGACCTGCAGA
TATGGTACCTATTATGCCGGCAGAAGTTACCGGGCTCAGCGTGTGTCAAAGCGTCGGACC
GACTTGTTGTACGCCATCAATGGAAGAAAAGTACATGGAGGCATCAGTGCGCGAACTCAG
GGAACTCGTGAAACGTAAAACGACTCCGTTAGAGAAGCATTTTCGGGCCATTGCCAAAAA
ATTCAGAGGTTACTGGAACCAAATGGTGAAACGAGCTCGCAGCCAAGGGATTAACGAAGG
AACCAACACTTCACATTTAGAAAGGTTTTACGACGGTTTACTAATTCCATCGAAGGCTCG
ACTGTCTTCTTTTAATGCCACCAAAAATCTTAACGGAATATTATCGTCGTTATTCATTTT
ATCATTGGAGGATGAAATCGGATTAAAGATACCGAAAGAGAAGATAGAATGTGCTTTAAC
GAAAGCGACTAGCTACCTGACTCCGTACGCCGTATTAAAATCCAAATTCGAAAACTTATT
AAATCCGGTCGGAGTATTTTTAAAGGCGCTAACGGTTGGCCTCAGGGCAGCGGAGGTGAG
TCGGCGAATCGCAACGGGTGGTCCATGTATCGATGCTATCACAAAGATGCGGTATTGCTC
CCACTGCTATGGATATACTCTTATAAAGACCTGTCCGGGCCTTTGTCATAACGTAGTGAG
AGGATGTCTGGTCGGCATGGCGGAATTGGATATGTTTTGGAAATATTATATTGTTTCCAT
TAATAACATGGCAAACAAATTGGTCAACACTGAAGGAGGATTCGACGTTTACTTTCCACA
AATTTTACGAAACATTTCACTGATCGTTCAAAGTGTTACTTACAACCAAGAATCTGTTAC
TTTGATTCTACAGCAATGCAAGATTCACCCTGAAAGAGTCGCCCGCTCACTCGATCGCTT
GCCGATAGCCGACGCAGATGAGTTAAACGAGTTGAGAACTGCACTGGCATCTCGAAAGCG
AAGACGAAGGCATCGCAACCGACCCGATCGTAAACCACGGGCCGAACCCCGACGTGGGCG
ACAATCTAGAGATAGGAAGAACCGCAACATTGATCTTCATCTAAAATCAAGGTCCTTGTT
GGAGTTATCGAGAGATCGAGTTCGTCCTCCTTTCGAAATGTTGTTGGAGGATTCTTCCCT
CCCTAACATTCCTTTGCCAACGAGAGAAAAGATGGTGCGGAAGAAGAAAAATCCCATGGT
GGATGAAATGAAGATACCAACCAGTCTAAAGTTTGGTTTATCAAATCATATTACAAGATT
TGCAGACGAGTTAAACACAACTCGAGACTTTTTCGCTTCCTTTTCCGACGACCTCTGCAG
CTCAAGTGATCCCGTTTCGTTTCAAGTTTCAAACTACGGACATTGCTGGGACGGGGTGAA
AATGGCGAACAGTTACAAAAAACCAACACCGGATAAAGGCATCGAGGGCCAATTGCAAAA
CCCAGAGGTTAAGGTTGTTACGTTGAAACGAGATGTACAAACGATCATTGAAGATGTGCG
AACAATTACTAAGGAGCTGATGAAATCTAGCGGATCGGAGCAAATTCCATCAGATTTGCT
TCAACGTCCGTCTTATATCACTTCCCATCTTCAAACAGACGAGATTCCATGCGATGACGA
GGATGAATGTTTTGATAATGGATCTGGAGAACAAAGTGGAGAGGACCCCGATGTTATTCG
TCCAGATAAACCTTCACTGAGTCTTGAAAAAATCCCGTTTCCCATCGCAAAAACAAACAC
GTCCATAAAAAGAGCTGACCAAGTAACCTCAACTACATCATTTACACTTGTATTTAACAA
CGAAGCTACTATGCCAGCGATCGTTGTTGGGATTGCCAAAGAACAAAATAAAAGCAACAT
ATCCCTTTCAACCTCAAGACAATCCGGTGGCGGGCACGGCTACGCGTCGCAACTAAAGAG
CAGAAAACTTTACGATATCTTATTGTGTGTGGTTTTCTCGATCCTCATAGCACAAGGAGC
ATGATAGTTTAACTTCCTCTGAATGCTTTTAAAGTTCTATTCCACGCAATAAACGTACAA
ATAGATCTACAGCGCGGAAGAGAATTGTCTTCAATTTGTAAATGTTCTTTTTCTCTTTTT
GTTTCTCAATTTCTGTGAAATGTTCATATTAAATGTCAGACACGCGAAATGGAAAA
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GPC4_HUMAN | 27.336 % | 103 | 5.06E-23 |
| GPC5_HUMAN | 22.801 % | 132 | 1.63E-32 |
| GPC3_HUMAN | 25.882 % | 110 | 4.21E-25 |