- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C11.299.v1...' >
- Transcript 'KH2012:KH.C14.307.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.307.v1.A.SL1-1
Possible name(s)
MYF5; MYF6; MYOD1
Gene model
Location
KhC14 [4,306,194 / 4,311,771]
Amino acid sequence
Length: 594
>KH.C14.307.v1.A.SL1-1
HIYTMTCISLEELDLSSIFSNSSSYFTSYATNPIMTSQKRTPSRLKRASSDVLLSDTAVS
PVSREVSGVLSELDELKRCVEGNYIGIDAEKSDISILEELSNMASGCSDSDVAYSSPDSR
YGSTGNLTSKTSFGSGMGFRDAGIGGPVSRGSSLRNPDIRGKRNSIEVKQENEQNPIEFV
LESFLNSNETSKPRIHESRVEDIQFTGPPISSIEPTITFASTEENHNDTVKAMMQYLTET
NQMCQENSVPEQIIFSDLNSVSASDSLPSVEELLQIPNEKSRSFKPDHTAKHQPTLNRPK
HFHNQVVNQPHVPILNPELQSFENFSPVINNSLITPTNTFTSNRMMELSPLSDLHSLSQD
EDMDTKMSHYHHTSHPNGHQCLVWACKACKRKTGPHDRRRAATLRERRRLKRVNQAYDAL
KRCACANPNQRLPKVEILRNAITYIYNLQHMLYGDQQSDAKSPETKPETTLSLGETFVSK
TEVDSPFYQSDDVRLTSSRTSSPVESLLESTSSSFIMSDLGDENTQPQDTFPVNLLTDDV
TRPSSTTPDVIAVVNEPTTTTEDRNSSPVTSVSNSDTKGASSLVCLTSIVERID
Nucleotide sequence
Length: 2,628
>KH2012:KH.C14.307.v1.A.SL1-1
AAATCTAGCCGGTAGTTTGACATATTTATACGATGACGTGTATCTCTCTAGAGGAGCTCG
ACCTCTCTTCAATATTCTCCAACAGCAGCAGCTATTTCACCAGTTACGCCACAAACCCCA
TTATGACGTCACAAAAACGGACGCCTTCACGACTGAAGCGAGCAAGCAGCGACGTTTTGT
TGTCAGATACAGCGGTTTCGCCGGTAAGTCGAGAAGTTTCGGGGGTTTTATCGGAACTGG
ACGAACTGAAGAGATGCGTGGAGGGAAATTATATCGGAATCGATGCGGAAAAGAGCGATA
TCTCGATACTTGAGGAACTTAGTAATATGGCGTCCGGTTGTAGCGATTCAGACGTCGCTT
ACTCGTCCCCGGATTCGAGGTACGGGTCAACTGGTAACCTTACCAGCAAGACAAGTTTCG
GATCGGGAATGGGTTTCCGTGACGCTGGGATTGGAGGGCCAGTTTCCCGTGGAAGTTCGC
TACGAAACCCCGATATTCGGGGCAAACGTAACTCCATTGAGGTGAAGCAAGAAAACGAAC
AAAACCCGATCGAGTTTGTTTTAGAAAGCTTCCTCAACTCAAACGAAACCTCCAAACCCA
GGATCCATGAGAGCAGAGTTGAAGACATCCAGTTCACAGGACCCCCTATTAGCAGCATTG
AGCCGACAATCACATTTGCATCAACAGAGGAGAATCACAACGACACAGTGAAAGCTATGA
TGCAATACTTAACCGAGACCAACCAAATGTGTCAAGAAAACAGTGTTCCCGAGCAAATAA
TCTTCAGCGACTTAAACAGTGTTTCCGCATCCGATTCTCTTCCAAGCGTTGAAGAATTGC
TTCAAATTCCGAACGAAAAAAGCCGCAGTTTTAAACCTGACCACACTGCGAAGCACCAGC
CGACGCTGAACCGCCCAAAACATTTCCACAACCAAGTAGTCAACCAGCCACATGTACCAA
TCCTAAACCCAGAGTTACAAAGCTTTGAAAACTTCAGCCCCGTGATAAACAACAGTCTCA
TCACTCCAACCAACACGTTCACATCCAACCGCATGATGGAGCTATCACCACTATCAGATC
TTCATAGTTTATCGCAGGATGAAGACATGGACACAAAGATGTCGCATTATCACCATACAA
GCCACCCAAACGGCCATCAATGTTTAGTATGGGCATGCAAAGCGTGTAAACGTAAAACTG
GGCCACACGACCGACGGAGGGCGGCAACACTACGAGAGAGACGACGCCTTAAACGTGTCA
ACCAAGCGTACGACGCCCTTAAGCGTTGCGCATGCGCAAACCCGAACCAGAGACTTCCGA
AAGTTGAGATTCTTCGCAACGCGATAACCTACATATACAATCTACAACATATGTTGTATG
GCGACCAACAGTCTGATGCAAAATCACCAGAAACCAAACCAGAAACGACTTTAAGCTTGG
GCGAAACTTTCGTTAGCAAAACCGAAGTTGATTCGCCGTTTTATCAGTCCGATGACGTCA
GACTTACGTCATCAAGGACGTCAAGCCCGGTTGAGTCCCTTCTTGAGTCCACGTCATCGT
CCTTCATAATGTCGGATTTGGGCGACGAAAATACTCAACCTCAGGATACGTTCCCGGTAA
ACTTGCTTACTGATGACGTCACCAGACCCTCGTCAACAACCCCTGACGTCATCGCTGTCG
TAAACGAACCAACAACAACAACGGAAGATCGAAACTCGAGCCCTGTGACGTCAGTGAGCA
ACAGCGACACCAAGGGAGCTTCTAGTTTGGTTTGTTTGACGTCGATCGTGGAAAGGATCG
ATTAAAAGAAGAAGTAGCGAGTCTACAAGATTCATATGATGTTGTATACAAGCAGAAGCG
TAACGTTGGGGGTGAATGGCCTGTCACCTTAACTTTTGATACGGAGTGCTAACATAGGTT
TTAGCACCCAAGTTTTACTCCAAAAACAGCATTTATTCCAGTTGGTCCATTATTGCCAAA
AAAACTACAGTAATTTAAATATTGTATCAAAACCACCGCATTTCGGGTGTCACTTTTCAA
ATTTCCGCGAAAAAACTTTTCGTTATACTGTATGATATTTTCCACTACCGTGTAAATATG
TTAGTATTGTTACGTTTATATACTAGGTATAATGTGTGCCACATATTTCTAATTGAAATC
CGAAACATTCATTTTTGCCACCGAAGATTCCAATCATGACGTTATAACTGCCAAAAATTT
AACTCGTTTTTATGTAAGACTGAAATATGTCCGTGCAGTATATTAGTTGTTGTCTAGCAG
TAATTCGCAACACTTTTGAAAACCAAAACGAATGTGCTTTGTATTACATTCACAAGTGTA
AAGTAAGTAATATATAGCAGTAGGGCGGGGTAAGATGGGACACCTTTGACACATAATATC
CAATTTTTCCTAACCGCTTTTTTAACAATTACCAACGCTATGTAGTCGCGTGGGGATATG
GTTATAGAATTCTGTAAATATTCTTTGTTTACAACCGAATGTGACGATAAAAAAAGACTA
AAACATGGGCCATCTTACCCCAAACTACTATATGTTTAACATAGATCGTGATTCAGTAAG
CGACTCGTTTTAAAATGTCAATACATCTGTCAATGTTAAGCGTTTGAA
| SMART |
Basic (IPR002546) - T[346-402] 1.9E-6 |
| Pfam |
Basic (IPR002546) - T[357-397] 1.5E-8 |
| Gene3D |
HLH_DNA-bd_sf (IPR036638) - T[387-453] 1.3E-17 |
| SUPERFAMILY |
HLH_DNA-bd_sf (IPR036638) - T[396-454] 5.1E-15 |
| CDD |
bHLH_dom (IPR011598) - T[397-452] 2.02905E-14 |
| ProSiteProfiles |
bHLH_dom (IPR011598) - T[397-448] 14.253 |
| Pfam |
bHLH_dom (IPR011598) - T[398-449] 1.9E-12 |
| SMART |
bHLH_dom (IPR011598) - T[403-454] 1.2E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MYF5_HUMAN | 64.516 % | 126 | 6.45E-33 |
| MYF6_HUMAN | 70.886 % | 123 | 7.77E-32 |
| MYOD1_HUMAN | 65.882 % | 122 | 6.07E-31 |