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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'Boleac.CG.SB_v3.S2.g...'
  3. Transcript 'Moocci.CG.ELv1_2.S63...'
  4. Transcript 'Cisavi.CG.ENS81.R30....'
  5. Transcript 'KH2012:KH.C14.309.v1...'

Transcript Model

Transcript Id

KH2012:KH.C14.309.v1.B.SL1-1

Possible name(s)

NLRC3; NOD1; NOD2

Location

KhC14 [1,925 / 8,818]

Sequences

Amino acid sequence

Length: 300

>KH.C14.309.v1.B.SL1-1
NYHVILFRLFIYYWLSNISAVEKLIRLLRRIIEELRGETLLPAGVSVPGRITKPVPLLIT
KVRQILDDEWKLHRNQREDLQRMYTPEGSILIEELFDVAKQVAQQEADEKCNTPEAKAMH
VVRYGNIVCAVGLPGVGKSTLLKMMINCIVVDKSVKPDTQFLFHVSLKKFNPKKKVTLLE
FLLYGNLSEWNHSDEENKALVHFLYNNPNVVISIDGWDELYTEQANERLHECQLDSKEIP
EVFVKNLLMGNLLPNAVKFITSRPGQFYKLHPDYRQGLVSEVRGMDKSAKKDLTKQILKD

Nucleotide sequence

Length: 2,403

>KH2012:KH.C14.309.v1.B.SL1-1
ATGAACAAAATATTGTGAAGGATCAAATATAGTGGATGCCATGGAAAGGAGAAGAAATGA
AACCAGAAATACCCAGGATGAAACACCACCTAAAGTAGCAGGAAGCTCTCATGCAGCTTT
TACATCAAGCAACGATGACACCAACCATCCTTCAATAAGTGAACCTCAACCTACTGTTTC
TTCACAATATCAACAACTCACACAGGAAGGCCAACCACAAGCAACCAACCAACCACAAGC
AACCAACCAACCACAAGCAACCAACCAATCACAAGCAGCCAACCAACCACAAGCAACCAA
CCAACCACAAGCAACCAACCAACTACAAGCAACCAACCAACCACAACTTATTGATATACT
CGGTATGTCTGGGGTCAAATGGTCTATTGTTTGTCTGTTGGTGCTATATCCTAGATAAAA
CTACCATGTTATATTATTTAGATTATTTATTTATTATTGGTTGTCAAATATTTCTGCAGT
TGAAAAATTAATACGGCTATTAAGAAGAATAATAGAAGAACTTCGTGGAGAAACCCTCTT
GCCAGCGGGAGTTTCAGTTCCAGGTCGTATCACCAAGCCTGTTCCACTTTTAATAACCAA
GGTCCGACAAATATTAGATGATGAATGGAAGCTACATAGAAACCAACGTGAGGACTTGCA
ACGTATGTACACACCAGAAGGTTCTATACTGATTGAGGAACTGTTTGATGTTGCAAAACA
AGTGGCTCAACAAGAAGCAGACGAGAAGTGCAACACACCTGAAGCCAAAGCCATGCATGT
AGTAAGATATGGTAACATTGTTTGTGCGGTTGGACTACCTGGGGTTGGTAAGAGCACTCT
TTTAAAGATGATGATCAACTGTATTGTTGTAGATAAATCAGTAAAACCAGATACACAGTT
TTTGTTCCACGTCTCACTGAAGAAATTTAACCCAAAGAAGAAAGTTACTCTGTTGGAATT
TCTTCTGTATGGCAACTTGAGTGAGTGGAATCATTCTGATGAAGAGAACAAAGCTTTGGT
TCATTTCCTGTACAACAATCCAAATGTTGTTATTTCGATTGATGGATGGGATGAACTGTA
TACAGAACAAGCCAATGAAAGGCTCCATGAGTGTCAACTGGATAGCAAGGAAATTCCAGA
GGTCTTTGTCAAGAACTTGTTGATGGGTAATCTTCTACCTAATGCTGTGAAATTTATCAC
ATCAAGACCAGGTCAGTTTTACAAGCTTCACCCTGATTATCGACAAGGTTTGGTTTCTGA
GGTGCGTGGTATGGATAAATCTGCAAAGAAGGATCTTACTAAACAGATATTAAAAGATTA
AAGATCGAAGATGTGCGAATGACAGATTCAACGACACAAGCCCTTCTCCCACATCTTGAT
GTGATGGATAAGCTTGGTTTGAAATCTTGGTCCAATGACATGAACCTGAACCCCTACATG
GAAGATATATCCAGGAAAATAATGGATCGGCAAAACAAAATACAGCTTGATATATCTGCA
CCACTGGATGAGAATGCTACACACTGGTTAGCCTGGTGTCTTTCTAATGTGAGTGACTTA
GAAATAGATGAGGAGGAACTTTCTGCACAAAATCGTATCATCTTACATGAAGCTGTTGAA
CGACTAACAAACCCACAAGATTTAACAGTGAATGACGTCAATGGTGATCGATGGTCAAAG
TATTGGGTATTGTATGGAGATCATTTAGATCAACCAGATAATGTAATGCAAATCTTACAA
CTTCCACTTGGAAAAATTGAAATATTGAACATCTGTGTTCGGATGACAGATTCAACGACA
CAAGCCCTTCTTCCTCATCTTGATGTGATGGATAAGCTTGGTTTGGTATCTGTGTACAAT
GACATGAACCTGAACCCCTACATAGAAGATATATCCAGGAAAATAATGGATCGGCAAAAC
AAAATACAAATATGGATGGAGGGTCCTGCAGTCAAACATGTAAGACCATTGTTCCAATGT
CTTGATAAAATATCGAAACTATATCTTGGTATGAAACATCTTACAAGTGAAAACAATCGT
TTACTGGAAGAAGCAATTCAACGATTACATTCTCCACAGGATTTTGTCTTGGAGGAAATA
GTTGATGTACATACTGATAAGGATCAGTATTTGGCTCAGTATAAAGAATTTTGGCAGTAA
TGACTTGATTTTTAAATTCTTCCCGTATTTCTATATTTCCCCAACACTATAACACACGAA
TTATATTTAAAGGAAATGTTTAGAAAATACTGATGGAACAAAATTTAATTCAAACAAAAT
CATTAAATTTTAGTTGCGTTTTCCAACAGTTCTTTCAATTTCATCCCTTCCATAAAGTAA
CAAACTTCACTGTGCAGCATATTTGTTTATACCAACATAAGATATCAACGCACATCTATG
ATA

InterProScan

ProSiteProfiles
NACHT_NTPase (IPR007111) - T[126-265] 13.285
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[127-297] 1.48E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value