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TRANSCRIPT CARD

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  1. Clone 'cien79030'
  2. Clone 'cieg016e11'
  3. Clone 'cien58941'
  4. Transcript 'KH2012:KH.C14.309.v1...'

Transcript Model

Transcript Id

KH2012:KH.C14.309.v1.B.SL2-1

Possible name(s)

NLRC3; NOD1; NOD2

Location

KhC14 [1,847 / 8,818]

Sequences

Amino acid sequence

Length: 300

>KH.C14.309.v1.B.SL2-1
NYHVILFRLFIYYWLSNISAVEKLIRLLRRIIEELRGETLLPAGVSVPGRITKPVPLLIT
KVRQILDDEWKLHRNQREDLQRMYTPEGSILIEELFDVAKQVAQQEADEKCNTPEAKAMH
VVRYGNIVCAVGLPGVGKSTLLKMMINCIVVDKSVKPDTQFLFHVSLKKFNPKKKVTLLE
FLLYGNLSEWNHSDEENKALVHFLYNNPNVVISIDGWDELYTEQANERLHECQLDSKEIP
EVFVKNLLMGNLLPNAVKFITSRPGQFYKLHPDYRQGLVSEVRGMDKSAKKDLTKQILKD

Nucleotide sequence

Length: 2,481

>KH2012:KH.C14.309.v1.B.SL2-1
TTGCTACCCTTGTTACTAGGATAACGTGAATTTGGTCTTTACAAAACGTTTGATGTAAAC
GCAGCGCAAATTTCACAGATGAACAAAATATTGTGAAGGATCAAATATAGTGGATGCCAT
GGAAAGGAGAAGAAATGAAACCAGAAATACCCAGGATGAAACACCACCTAAAGTAGCAGG
AAGCTCTCATGCAGCTTTTACATCAAGCAACGATGACACCAACCATCCTTCAATAAGTGA
ACCTCAACCTACTGTTTCTTCACAATATCAACAACTCACACAGGAAGGCCAACCACAAGC
AACCAACCAACCACAAGCAACCAACCAACCACAAGCAACCAACCAATCACAAGCAGCCAA
CCAACCACAAGCAACCAACCAACCACAAGCAACCAACCAACTACAAGCAACCAACCAACC
ACAACTTATTGATATACTCGGTATGTCTGGGGTCAAATGGTCTATTGTTTGTCTGTTGGT
GCTATATCCTAGATAAAACTACCATGTTATATTATTTAGATTATTTATTTATTATTGGTT
GTCAAATATTTCTGCAGTTGAAAAATTAATACGGCTATTAAGAAGAATAATAGAAGAACT
TCGTGGAGAAACCCTCTTGCCAGCGGGAGTTTCAGTTCCAGGTCGTATCACCAAGCCTGT
TCCACTTTTAATAACCAAGGTCCGACAAATATTAGATGATGAATGGAAGCTACATAGAAA
CCAACGTGAGGACTTGCAACGTATGTACACACCAGAAGGTTCTATACTGATTGAGGAACT
GTTTGATGTTGCAAAACAAGTGGCTCAACAAGAAGCAGACGAGAAGTGCAACACACCTGA
AGCCAAAGCCATGCATGTAGTAAGATATGGTAACATTGTTTGTGCGGTTGGACTACCTGG
GGTTGGTAAGAGCACTCTTTTAAAGATGATGATCAACTGTATTGTTGTAGATAAATCAGT
AAAACCAGATACACAGTTTTTGTTCCACGTCTCACTGAAGAAATTTAACCCAAAGAAGAA
AGTTACTCTGTTGGAATTTCTTCTGTATGGCAACTTGAGTGAGTGGAATCATTCTGATGA
AGAGAACAAAGCTTTGGTTCATTTCCTGTACAACAATCCAAATGTTGTTATTTCGATTGA
TGGATGGGATGAACTGTATACAGAACAAGCCAATGAAAGGCTCCATGAGTGTCAACTGGA
TAGCAAGGAAATTCCAGAGGTCTTTGTCAAGAACTTGTTGATGGGTAATCTTCTACCTAA
TGCTGTGAAATTTATCACATCAAGACCAGGTCAGTTTTACAAGCTTCACCCTGATTATCG
ACAAGGTTTGGTTTCTGAGGTGCGTGGTATGGATAAATCTGCAAAGAAGGATCTTACTAA
ACAGATATTAAAAGATTAAAGATCGAAGATGTGCGAATGACAGATTCAACGACACAAGCC
CTTCTCCCACATCTTGATGTGATGGATAAGCTTGGTTTGAAATCTTGGTCCAATGACATG
AACCTGAACCCCTACATGGAAGATATATCCAGGAAAATAATGGATCGGCAAAACAAAATA
CAGCTTGATATATCTGCACCACTGGATGAGAATGCTACACACTGGTTAGCCTGGTGTCTT
TCTAATGTGAGTGACTTAGAAATAGATGAGGAGGAACTTTCTGCACAAAATCGTATCATC
TTACATGAAGCTGTTGAACGACTAACAAACCCACAAGATTTAACAGTGAATGACGTCAAT
GGTGATCGATGGTCAAAGTATTGGGTATTGTATGGAGATCATTTAGATCAACCAGATAAT
GTAATGCAAATCTTACAACTTCCACTTGGAAAAATTGAAATATTGAACATCTGTGTTCGG
ATGACAGATTCAACGACACAAGCCCTTCTTCCTCATCTTGATGTGATGGATAAGCTTGGT
TTGGTATCTGTGTACAATGACATGAACCTGAACCCCTACATAGAAGATATATCCAGGAAA
ATAATGGATCGGCAAAACAAAATACAAATATGGATGGAGGGTCCTGCAGTCAAACATGTA
AGACCATTGTTCCAATGTCTTGATAAAATATCGAAACTATATCTTGGTATGAAACATCTT
ACAAGTGAAAACAATCGTTTACTGGAAGAAGCAATTCAACGATTACATTCTCCACAGGAT
TTTGTCTTGGAGGAAATAGTTGATGTACATACTGATAAGGATCAGTATTTGGCTCAGTAT
AAAGAATTTTGGCAGTAATGACTTGATTTTTAAATTCTTCCCGTATTTCTATATTTCCCC
AACACTATAACACACGAATTATATTTAAAGGAAATGTTTAGAAAATACTGATGGAACAAA
ATTTAATTCAAACAAAATCATTAAATTTTAGTTGCGTTTTCCAACAGTTCTTTCAATTTC
ATCCCTTCCATAAAGTAACAAACTTCACTGTGCAGCATATTTGTTTATACCAACATAAGA
TATCAACGCACATCTATGATA

InterProScan

ProSiteProfiles
NACHT_NTPase (IPR007111) - T[126-265] 13.285
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[127-297] 1.48E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value