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  1. Transcript 'KH2012:KH.S702.1.v1....'
  2. Transcript 'Mooccu.CG.ELv1_2.S23...'
  3. Clone 'AHC0AAA74YJ07'
  4. Clone 'cilv032e19'
  5. Transcript 'KH2012:KH.C14.312.v1...'

Transcript Model

Transcript Id

KH2012:KH.C14.312.v1.A.SL2-1

Possible name(s)

LDB3; PDLIM1; PDLIM3

Location

KhC14 [388,507 / 394,341]

Sequences

Amino acid sequence

Length: 253

>KH.C14.312.v1.A.SL2-1
ESQQVKMAPPRVQNSVTLFGSAPWGFRLSGGKEFNQPLVITRITPGSVAARSGLTSGDVL
VAVNGLFVTEMTQDQCEVKIKQAVGSIQLVVEKNAAAVSQNSSGEITMDADRSIYVQGGP
THNRTGQSGTATRPMKVPISGHNSVPVFDPSMLKKSASTKQGTVVMKGPGKSKVIHAQYN
TPMGMYSNDNIIDTVQAQAQSMGVSLPGASGDSSPLNPNSAVFREVHRQSAAPNKSNQSR
SFKMLQSFVENEN

Nucleotide sequence

Length: 1,029

>KH2012:KH.C14.312.v1.A.SL2-1
GAATCACAGCAGGTTAAGATGGCTCCACCACGGGTTCAGAATTCTGTTACTTTGTTTGGA
TCTGCACCATGGGGTTTCAGATTATCTGGAGGAAAGGAATTCAACCAACCATTAGTTATT
ACACGGATTACACCTGGAAGTGTAGCAGCACGATCTGGCTTGACTTCTGGTGATGTATTG
GTCGCTGTAAACGGTCTGTTTGTTACTGAAATGACTCAGGATCAATGTGAGGTTAAAATA
AAGCAAGCAGTTGGATCAATTCAACTCGTTGTTGAAAAAAATGCTGCAGCTGTGTCTCAA
AACTCATCTGGTGAGATAACCATGGATGCTGACAGAAGTATTTATGTACAAGGCGGGCCA
ACACATAATAGAACAGGACAAAGTGGAACTGCAACAAGACCTATGAAAGTACCTATAAGC
GGTCACAACTCTGTACCAGTGTTCGATCCATCGATGCTTAAAAAATCAGCATCAACAAAA
CAAGGAACTGTAGTCATGAAAGGACCAGGCAAATCTAAAGTGATCCATGCGCAATATAAC
ACGCCTATGGGAATGTATTCGAATGATAATATCATTGATACTGTACAAGCACAAGCTCAA
TCTATGGGAGTGTCTTTGCCCGGGGCTAGCGGAGACTCTTCCCCTCTGAACCCAAACTCT
GCTGTTTTCCGCGAAGTACATCGACAGTCTGCAGCCCCAAACAAATCAAACCAGTCAAGG
AGTTTTAAGATGCTGCAGTCGTTCGTAGAAAATGAAAATTGATTGGAAAATATACTTAAG
AACTGGAATTTTATTGCACCTTAAATACTATGTTTCGGTTAAAGTGTATGTTTGTATTTA
AAAACACAGACTGAAACCGGATAGAATATCTTCGAAACACAAAACTGCAAGTGTTTTTAT
AAGTCTATTATTTATACTCTTGTGTTCATCTCGATCCAACTTGTAAAATTTTCCACCTGA
AGAGATGTGACATAATGCATAAACTATTGCCTATATAAAGTTATGTGTTACAATATACCT
TTGTGTATA

InterProScan

SUPERFAMILY
PDZ_sf (IPR036034) - T[17-94] 5.78E-19
ProSiteProfiles
PDZ (IPR001478) - T[20-95] 14.958
Pfam
PDZ (IPR001478) - T[21-92] 3.1E-14
SMART
PDZ (IPR001478) - T[22-95] 7.6E-17
SMART
Zasp-like_motif (IPR006643) - T[173-198] 1.5E-11
Pfam
DUF4749 (IPR031847) - T[173-252] 2.0E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LDB3_HUMAN 29.553 % 100 4.16E-24
PDLI3_HUMAN 33.846 % 133 5.91E-37
PDLI1_HUMAN 30.8 % 97.8 6.25E-24





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