- Clone 'cima026b11' >
- Clone 'cien53519' >
- Transcript 'KH2012:KH.C14.328.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.328.v1.A.SL1-1
Possible name(s)
SEC24A; SEC24B; SEC24C
Gene model
Location
KhC14 [1,926,904 / 1,942,866]
Amino acid sequence
Length: 855
>KH.C14.328.v1.A.SL1-1
LSAPPSAQPAPPPLPGQQYVPPNPLAAPPLPQPSGAPQAPMTQPPQNNAYQFNGPPPTGS
SINRQPGPTPQYPGSLPQPNQPPLSHAMGRMNLSDAERPINLMQEKRLLPPHKHVETPLR
FETTADQGMLVPPNRKNCNPSVFCSTLKAVPHTQNLLGKVKLPFGLIIHPFKDLSSLPVI
SAGTIVRCKRCRTYINPFVSFLQERKWRCNMCFMVNDTAEEFLHHPVTKTYGEPHTRPEC
TNSTIEFIAPQEYMLRPPQPAVYLFLMDVSHSAIESGYLQIVCDSLLDHLDHMPGDGRTR
IGFLTYNGTVHFYRLSEGLSQPQMIIVSDIDDVFIPTPENLLVNLRESKSLVQDLLHQLP
LLHTVDAEGEIDTYSALGAALEVAKKLIGASGGRVTVFQQAIPSIGPGMLKKREDPNARA
GEQSTTALNPSTDYYKKLALDCSAQQVAIDFFFFNSQYIDIATLSCASRFSAGDMHYYPS
LHTVHNPIEAERLSRDLERYLSRKIGFESVMRIRCTKGLAIHTFHGNFFVRSTDLLSLAN
INPDAGYAVNLSIEDPLTDLSAVCFQAALLYTTSKGERRIRVHTLCIPVVKSPAEVFNSV
DCVAVISLLSKMAVDRSVTASVSDAREALMNALVDPLKAYKETLPQGMTTAGVYVPKSLR
LLPLYIQCLLKHRAFRTGISTRLDDRVFAMINFKMQPALYQMLDLHPDLYRVDDLNDEGV
LTVSGREIPQPHVLPLTAESLSQSGAFLLDCGWKMYLLVGRLTSQSFIKDVLDYPQFSNI
EEPLSSIPELENPSSEMFHSFVDWLQENRPHHAPISVIRDDSRDRQLVLSRLIQDRTESS
MSMQEFLMNLQQKLT
Nucleotide sequence
Length: 4,137
>KH2012:KH.C14.328.v1.A.SL1-1
TTCAAATTTTCTTTTCATAGTTTTTTCCTTCATTTTAAGAGTTTAATGTGTTATACACCG
TGTAACCTGCAGTTAGTTAATGGCGCAAAGTAATCCATACTACCAAAACTCCACACAGAG
TGGGGGCTACCAGTATGGCACCCAACCAAATGTTGCAGGTCCCCCACCTCAAGGATACAA
CATGAAAGACCAATACAGGGGTAGCCAGCCCCCTATGACTGCCCCAAGTTACCCTCCTTC
CACCGTGAATGGCTATAACAACTACCCGCAGCGAGGTTATTCCCCTAATACACAACCACC
CCCACAACCAGGGTATTCCCCCAACACCCAACCTCCCCCACAAAATACAATGAACGGACC
CCCTGTGTCTGCTGGTTACTACTCCAACACCTACCCAAAGTCTGCCCCCAACCCCTCTAT
GCCCCCATACTCCCAAAGCCAATTCACACCCCCAAAATCAAACAGCCCCCTTCCTAATGC
ACCCCAACGCAATTCCCCCCAACCAAATGTGTCTAATGGACCTCATGCACCCTCTCGGCC
CCCGCCAAGCATGGCAACATCGTACAGCAGCGCCCCACCACCAAATGTCCACCAAAATCC
GTATCAGACTGGAACAGCTGGTTATCCAAGCAACATTGGTCCCACAAGTCACGCACCTCC
CCCTAATGTTTCACAAAGTTTTCCAAATCAGACGTCCCAACACGGTCACTCCCTACCCCC
ACTACCTGGCCAACAGGTAACTGTCTGCTCCACCAAGTGCCCAACCTGCACCACCCCCGT
TACCAGGGCAACAATACGTGCCACCCAACCCCCTAGCTGCCCCACCTTTACCCCAACCTA
GTGGGGCACCACAGGCACCCATGACACAACCCCCTCAAAATAATGCATACCAATTCAATG
GCCCCCCGCCCACCGGTTCAAGCATAAACCGGCAACCAGGTCCAACCCCTCAATACCCAG
GTTCGTTGCCCCAACCCAACCAACCACCTCTATCTCATGCAATGGGCAGAATGAATTTAA
GTGATGCTGAAAGACCTATCAACTTAATGCAGGAAAAACGACTTCTCCCGCCACACAAGC
ATGTTGAAACACCTCTTCGATTTGAAACAACTGCTGATCAAGGCATGCTTGTCCCACCTA
ACAGAAAGAACTGCAATCCAAGTGTTTTTTGTTCTACATTGAAAGCTGTACCTCATACTC
AAAACCTACTGGGCAAAGTGAAGCTTCCATTTGGTTTGATCATTCATCCTTTTAAGGATC
TAAGCTCTTTACCTGTAATATCAGCGGGCACCATCGTACGTTGCAAGCGTTGTCGCACGT
ACATCAATCCATTCGTGAGCTTCTTACAGGAGCGAAAATGGCGCTGTAACATGTGTTTCA
TGGTAAATGACACGGCTGAGGAGTTCTTGCACCACCCGGTGACTAAAACGTACGGCGAGC
CGCACACGAGACCTGAATGTACAAACTCAACCATCGAGTTTATCGCACCACAGGAATACA
TGTTACGACCCCCTCAACCTGCTGTTTACCTTTTCCTAATGGATGTTTCACATTCTGCCA
TTGAATCCGGTTACCTACAGATAGTTTGCGATTCACTTCTGGATCATCTTGATCATATGC
CAGGTGATGGAAGGACCAGGATAGGATTCCTCACTTATAATGGGACGGTTCATTTCTACA
GACTAAGTGAAGGCCTCTCACAACCACAAATGATAATTGTCTCAGATATTGATGATGTTT
TTATCCCAACACCTGAGAATTTGCTCGTGAATCTTCGAGAGAGCAAATCGCTCGTCCAAG
ATCTTCTACATCAGCTCCCCCTCCTCCACACAGTGGATGCAGAGGGAGAGATTGACACGT
ATTCAGCTCTCGGAGCCGCTCTTGAAGTGGCCAAGAAACTAATCGGAGCATCTGGAGGAC
GTGTGACTGTCTTCCAGCAAGCCATTCCATCTATAGGTCCTGGGATGTTGAAGAAGAGAG
AGGACCCTAATGCAAGAGCAGGAGAGCAATCCACAACTGCCCTCAACCCAAGCACGGATT
ATTACAAGAAATTAGCTCTCGACTGTTCTGCACAGCAGGTGGCCATTGATTTTTTCTTCT
TCAATTCTCAATACATCGACATCGCCACTCTGTCTTGTGCGTCTCGTTTTTCTGCTGGTG
ACATGCATTACTACCCGTCTCTACATACTGTGCACAACCCTATTGAAGCGGAACGGTTAA
GCAGGGACCTGGAGCGATATTTGAGCAGAAAAATTGGATTTGAATCTGTAATGAGAATAA
GATGCACTAAAGGTCTCGCCATTCACACTTTTCATGGAAATTTCTTTGTTCGTTCAACTG
ACCTTCTGTCCCTGGCGAATATAAATCCCGATGCTGGTTATGCGGTCAATCTTTCAATTG
AAGATCCTCTCACTGATTTATCTGCTGTCTGTTTCCAAGCTGCTTTACTTTACACTACAA
GCAAGGGTGAAAGGCGTATAAGGGTCCACACGTTATGTATACCTGTTGTAAAATCACCTG
CCGAAGTATTTAACAGCGTGGATTGTGTGGCTGTCATATCTCTGCTTTCAAAAATGGCTG
TGGACAGATCAGTCACTGCATCGGTCAGTGATGCACGTGAAGCTCTCATGAATGCATTGG
TTGATCCACTGAAGGCATACAAGGAAACACTGCCACAAGGCATGACCACTGCAGGAGTTT
ACGTCCCAAAATCTCTTAGACTGCTCCCACTGTACATCCAATGTTTGCTCAAACATCGAG
CTTTCCGAACCGGCATCTCAACACGTTTAGACGATCGAGTCTTCGCAATGATCAACTTTA
AGATGCAACCCGCGCTCTACCAGATGCTGGATTTGCATCCGGACCTTTATAGAGTGGACG
ACCTTAATGATGAGGGTGTGCTCACTGTATCAGGAAGGGAAATCCCCCAACCCCATGTCT
TACCCCTCACGGCAGAATCTCTCTCCCAATCCGGGGCTTTCCTGTTGGACTGCGGATGGA
AGATGTACCTCCTTGTGGGAAGACTCACATCTCAATCCTTCATCAAAGATGTTCTTGATT
ATCCACAGTTCAGCAACATTGAAGAGCCATTGTCTTCGATCCCGGAGCTTGAGAATCCAT
CCTCTGAAATGTTTCACAGTTTTGTTGACTGGTTGCAAGAGAACCGACCACATCATGCTC
CTATATCTGTTATAAGAGACGACAGCAGAGACAGACAGCTTGTCTTATCTCGTCTCATAC
AAGACCGCACCGAGAGCTCAATGTCCATGCAGGAGTTCTTGATGAATTTACAGCAGAAAC
TCACATAGTTCACACAACTTATGCTGTAGCAAAACTTAATTTGGATAAAAACATTTCACT
TCACCCACTAATCAAGCATGTATTGCCAAAACAAGGTGGAAATCTATAAAAAGACTTATT
TAAACAGATTTTACTTGCAATATGTTGTGTACTTCGTAGCTGAACTGCATTGTCTATTAT
ATATACATTGCAGTTGTTTTAGTCCTTTTTCTAAAGGAAGAACTGTAAAAGTACGACTAA
ATTAAATGATATATAGCCAATCATATCTTAATGAAGGTATGTAAAAGTTATAATCATACT
TTTCAATTGCATTTCCATGTTTTGGCCCAATATGTCGACATATTTATTTTGCAATTGATT
TTCGAAATAGCTTGTACATTACATAGCGTTGTCTTGCGTGTCAAAGTTCTGAAAAGGCGT
TCAAAATTCGTTTTTTTTTGCATTTTTAGAATTTTTACCAAGTGTTCTAAATATTATAGC
ATGTCCCCAAAGTAGCAGAACGTATATTAACGTTGGTACACTGGCAAACTTTTACTGTAG
CTTTTCCCTAGATCACTCTTTAAAGTTTTACAAAGGAACCGTTAGAGGTAGTTCTGCTAG
AGCTACTTGCTGTTGTATTGCCGTATATGTACAGATGCTGTGCTGCTTGCTGTACTTCGT
TTGCGAACAAGTTAAGTATTTTTTGTCCCATTTCGACTGGACGAATGCTTTTAAACAGAC
CATTCGTCTGGTATTGGTTATCGAAGGCTCCCAGAATGTTCGTATTTATTTAATATTCCA
GTTGCTGTGTGATGATGAATATATTACAATTTCCGTTGACAAACTAACTGAAATTAA
| SUPERFAMILY |
Znf_Sec23_Sec24_sf (IPR036174) - T[174-257] 5.89E-22 |
| Pfam |
Znf_Sec23_Sec24 (IPR006895) - T[185-221] 4.3E-13 |
| Pfam |
Sec23/24_trunk_dom (IPR006896) - T[258-501] 1.8E-70 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[258-504] 9.21E-63 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[260-503] 2.6E-269 |
| Pfam |
Sec23_24_beta_S (IPR012990) - T[506-590] 3.4E-20 |
| Pfam |
Sec23/24_helical_dom (IPR006900) - T[601-697] 2.1E-22 |
| SUPERFAMILY |
Sec23/24_helical_dom_sf (IPR036175) - T[601-705] 1.36E-25 |
| SUPERFAMILY |
Gelsolin-like_dom_sf (IPR036180) - T[707-853] 8.37E-26 |
| Gene3D |
ADF-H/Gelsolin-like_dom_sf (IPR029006) - T[707-835] 2.6E-269 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SC24C_HUMAN | 27.54 % | 361 | 1.8E-109 |
| SC24B_HUMAN | 56.401 % | 927 | 0 |
| SC24A_HUMAN | 53.912 % | 899 | 0 |