- Clone 'cima8112422' >
- Transcript 'KH2012:KH.L170.28.v4...' >
- Transcript 'Haaura.CG.MTP2014.S4...' >
- Clone 'cigd048k18' >
- Transcript 'KH2012:KH.C14.369.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.369.v1.A.nonSL2-1
Possible name(s)
C6; C8A; C9
Gene model
Location
KhC14 [771,345 / 782,869]
>KH.C14.369.v1.A.nonSL2-1
FKMRLTPLLVLLVLLVGTSSAWRRRRRRRRAPSPVNCAVSNWSGWGTCSRSCATGSQSRT
RGITRHPAHGGSGCGALSQSRSCNRHKCPIHCRWGNWGPWSDCTSCFPGGRSRSRNVTVA
AMFGGNSCSGLAVSTDHSCTAADHCPFAIQCPSRMYSCSDELTCIQPRLRCNGDDDCTDF
SDEHECPAIRKPCGSTSIREIPYIDIAGLGYDITLGEEIGTILDNRQYGGRCGRVRSGEH
NQLFRKPANMQSFRFQSRVQTTVSAVSYESAKSFYESEKGEMERKLQGSASFSFGNIFSL
SGGATKTRNSKTLRIIERGTSSDVKYFRVFSNIVLSRFRTIRRSFKLSHSFRQRLLELPQ
HYDYAKYSELITDYGTHFYSSGVLGGRYEFVYRFSKAELRESGLSDEEQRNCLKTEASFK
IFKLGSSGGSNRCTNNVLSRRHNGSFTMAAKEVISNVIGGQSHTASALSFFARNRLTTNA
YENWTASVKLSPAVIDFKLRPISSVIPDRAKQRNMALAIEHYFAKYQTSKCTGRCENSGR
SVVVRDGTICKCLCAPGRSGSSCEN
>KH2012:KH.C14.369.v1.A.nonSL2-1
ATATTTGCAGATATACAAACTGCAAGTAAGAGGCGTAATTCAAAATGAGACTTACCCCAC
TCCTCGTGTTGTTGGTTCTTTTAGTTGGCACTTCTTCAGCTTGGAGAAGAAGACGTCGTC
GTCGAAGAGCTCCGTCGCCAGTAAATTGTGCGGTGTCAAATTGGTCGGGTTGGGGAACAT
GCAGCAGAAGTTGTGCAACTGGAAGTCAATCTCGCACTCGAGGAATAACTCGCCACCCAG
CCCACGGTGGTAGCGGTTGTGGTGCATTAAGTCAGTCAAGGTCGTGCAATCGACATAAAT
GTCCAATACATTGTCGGTGGGGTAATTGGGGACCGTGGTCGGATTGCACATCATGTTTCC
CAGGCGGAAGGAGTCGATCCCGTAACGTCACAGTAGCCGCCATGTTTGGAGGAAATTCGT
GTTCTGGACTTGCTGTTTCAACAGATCACTCATGTACTGCCGCTGATCATTGTCCATTTG
CTATACAATGCCCAAGTCGCATGTATTCGTGTTCAGATGAGTTAACTTGCATTCAGCCAA
GATTACGTTGCAATGGCGACGATGATTGCACCGATTTCTCTGATGAGCATGAATGTCCTG
CCATACGAAAACCATGCGGAAGTACAAGTATAAGAGAAATACCATACATTGATATTGCTG
GGTTGGGATACGACATTACACTAGGAGAGGAGATCGGAACAATTCTAGATAATCGTCAAT
ACGGTGGAAGATGTGGAAGAGTAAGAAGTGGCGAACATAATCAACTGTTTCGAAAACCAG
CAAATATGCAATCATTCCGATTCCAGAGTCGCGTCCAAACTACCGTGTCTGCAGTTTCAT
ACGAAAGCGCGAAAAGTTTTTACGAATCTGAAAAAGGAGAAATGGAACGAAAACTTCAGG
GCTCGGCATCGTTTTCTTTTGGAAATATATTCAGCTTAAGTGGAGGTGCAACCAAAACAA
GAAATTCAAAAACTTTACGAATCATCGAACGCGGAACATCTAGTGACGTCAAATACTTCA
GAGTTTTCAGCAACATTGTTTTATCCAGATTCAGAACCATTCGAAGATCGTTTAAATTGT
CCCACTCATTTCGACAACGGTTACTAGAACTTCCCCAACATTACGATTATGCCAAATATT
CGGAGCTCATAACAGATTACGGAACGCATTTCTACTCTTCTGGTGTGCTGGGCGGCCGGT
ATGAATTCGTGTACAGGTTTTCGAAGGCCGAACTCAGAGAATCAGGTTTATCTGACGAAG
AACAGAGGAACTGCTTAAAAACTGAGGCTTCTTTTAAGATATTTAAGCTTGGCAGCAGCG
GTGGAAGTAATAGGTGTACGAATAATGTATTGTCACGACGACATAACGGAAGTTTTACAA
TGGCTGCTAAGGAAGTTATATCAAATGTGATTGGTGGGCAGTCTCATACAGCTAGTGCTC
TCAGTTTCTTTGCTAGAAACCGACTTACAACAAATGCTTACGAAAACTGGACAGCATCAG
TTAAACTTAGCCCTGCAGTCATCGATTTCAAGCTGCGACCCATATCATCGGTCATCCCAG
ACAGAGCGAAGCAGAGAAACATGGCTTTGGCAATTGAACACTACTTCGCTAAATACCAGA
CTTCGAAATGTACTGGCCGTTGTGAAAATAGTGGTAGATCGGTCGTAGTGAGAGATGGGA
CAATCTGCAAATGCCTTTGTGCCCCTGGTCGTTCAGGATCATCATGTGAAAATTGATCAG
CTCAACTTAAAAACTGTAAATAGATCACCATGGGCGTTTTACCACATAAAAACGCTAAAT
CTTCACTCTTGTATATACAACATCTGGATCCATAATAATCTTGCAAACCAAGAGACAGTA
TACACTTAACAGAAGCTTTATTTCCAACAGCAAATTGACAACACCGCAACCAACCACGTT
AAGCACCTTCGGTGAAGGAATGAACTGAATTTTCCAAGCAGTAATAGTACGGTTTAACTG
AATATAAACACAATAATACATGTACGCCATTCAAA
SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[33-88] 3.14E-9 - T[90-135] 3.27E-6 |
Gene3D |
TSP1_rpt_sf (IPR036383) - T[35-89] 1.6E-11 - T[90-139] 6.6E-7 |
ProSiteProfiles |
TSP1_rpt (IPR000884) - T[36-89] 12.172 - T[91-146] 10.655 |
SMART |
TSP1_rpt (IPR000884) - T[39-89] 6.6E-10 - T[94-146] 3.1E-4 |
Pfam |
TSP1_rpt (IPR000884) - T[40-88] 6.1E-5 - T[95-144] 1.2E-4 |
PRINTS |
MAC_perforin (IPR001862) - T[112-128] 1.8E-23 - T[157-177] 1.8E-23 - T[356-378] 1.8E-23 - T[483-502] 1.8E-23 - T[532-552] 1.8E-23 |
SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[150-195] 3.01E-8 |
ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[150-187] 11.663 |
SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[150-188] 3.3E-8 |
Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[150-186] 3.3E-7 |
CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[151-186] 4.74222E-8 |
ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[164-186] . |
ProSiteProfiles |
MACPF (IPR020864) - T[189-534] 28.435 |
Pfam |
MACPF (IPR020864) - T[321-522] 2.7E-37 |
SMART |
MACPF (IPR020864) - T[325-524] 5.7E-30 |
ProSitePatterns |
MACPF_CS (IPR020863) - T[367-378] . |
ProSitePatterns |
EGF-like_CS (IPR013032) - T[552-563] . |
Protein Name | Identity | Bit Score | e-value |
---|---|---|---|
CO6_HUMAN | 32.959 % | 283 | 4.36E-85 |
CO8A_HUMAN | 28.46 % | 219 | 4.64E-64 |
CO9_HUMAN | 27.866 % | 193 | 1.11E-54 |