Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 565

>KH.C14.369.v1.A.nonSL2-1
FKMRLTPLLVLLVLLVGTSSAWRRRRRRRRAPSPVNCAVSNWSGWGTCSRSCATGSQSRT
RGITRHPAHGGSGCGALSQSRSCNRHKCPIHCRWGNWGPWSDCTSCFPGGRSRSRNVTVA
AMFGGNSCSGLAVSTDHSCTAADHCPFAIQCPSRMYSCSDELTCIQPRLRCNGDDDCTDF
SDEHECPAIRKPCGSTSIREIPYIDIAGLGYDITLGEEIGTILDNRQYGGRCGRVRSGEH
NQLFRKPANMQSFRFQSRVQTTVSAVSYESAKSFYESEKGEMERKLQGSASFSFGNIFSL
SGGATKTRNSKTLRIIERGTSSDVKYFRVFSNIVLSRFRTIRRSFKLSHSFRQRLLELPQ
HYDYAKYSELITDYGTHFYSSGVLGGRYEFVYRFSKAELRESGLSDEEQRNCLKTEASFK
IFKLGSSGGSNRCTNNVLSRRHNGSFTMAAKEVISNVIGGQSHTASALSFFARNRLTTNA
YENWTASVKLSPAVIDFKLRPISSVIPDRAKQRNMALAIEHYFAKYQTSKCTGRCENSGR
SVVVRDGTICKCLCAPGRSGSSCEN

Nucleotide sequence

Length: 2,015

>KH2012:KH.C14.369.v1.A.nonSL2-1
ATATTTGCAGATATACAAACTGCAAGTAAGAGGCGTAATTCAAAATGAGACTTACCCCAC
TCCTCGTGTTGTTGGTTCTTTTAGTTGGCACTTCTTCAGCTTGGAGAAGAAGACGTCGTC
GTCGAAGAGCTCCGTCGCCAGTAAATTGTGCGGTGTCAAATTGGTCGGGTTGGGGAACAT
GCAGCAGAAGTTGTGCAACTGGAAGTCAATCTCGCACTCGAGGAATAACTCGCCACCCAG
CCCACGGTGGTAGCGGTTGTGGTGCATTAAGTCAGTCAAGGTCGTGCAATCGACATAAAT
GTCCAATACATTGTCGGTGGGGTAATTGGGGACCGTGGTCGGATTGCACATCATGTTTCC
CAGGCGGAAGGAGTCGATCCCGTAACGTCACAGTAGCCGCCATGTTTGGAGGAAATTCGT
GTTCTGGACTTGCTGTTTCAACAGATCACTCATGTACTGCCGCTGATCATTGTCCATTTG
CTATACAATGCCCAAGTCGCATGTATTCGTGTTCAGATGAGTTAACTTGCATTCAGCCAA
GATTACGTTGCAATGGCGACGATGATTGCACCGATTTCTCTGATGAGCATGAATGTCCTG
CCATACGAAAACCATGCGGAAGTACAAGTATAAGAGAAATACCATACATTGATATTGCTG
GGTTGGGATACGACATTACACTAGGAGAGGAGATCGGAACAATTCTAGATAATCGTCAAT
ACGGTGGAAGATGTGGAAGAGTAAGAAGTGGCGAACATAATCAACTGTTTCGAAAACCAG
CAAATATGCAATCATTCCGATTCCAGAGTCGCGTCCAAACTACCGTGTCTGCAGTTTCAT
ACGAAAGCGCGAAAAGTTTTTACGAATCTGAAAAAGGAGAAATGGAACGAAAACTTCAGG
GCTCGGCATCGTTTTCTTTTGGAAATATATTCAGCTTAAGTGGAGGTGCAACCAAAACAA
GAAATTCAAAAACTTTACGAATCATCGAACGCGGAACATCTAGTGACGTCAAATACTTCA
GAGTTTTCAGCAACATTGTTTTATCCAGATTCAGAACCATTCGAAGATCGTTTAAATTGT
CCCACTCATTTCGACAACGGTTACTAGAACTTCCCCAACATTACGATTATGCCAAATATT
CGGAGCTCATAACAGATTACGGAACGCATTTCTACTCTTCTGGTGTGCTGGGCGGCCGGT
ATGAATTCGTGTACAGGTTTTCGAAGGCCGAACTCAGAGAATCAGGTTTATCTGACGAAG
AACAGAGGAACTGCTTAAAAACTGAGGCTTCTTTTAAGATATTTAAGCTTGGCAGCAGCG
GTGGAAGTAATAGGTGTACGAATAATGTATTGTCACGACGACATAACGGAAGTTTTACAA
TGGCTGCTAAGGAAGTTATATCAAATGTGATTGGTGGGCAGTCTCATACAGCTAGTGCTC
TCAGTTTCTTTGCTAGAAACCGACTTACAACAAATGCTTACGAAAACTGGACAGCATCAG
TTAAACTTAGCCCTGCAGTCATCGATTTCAAGCTGCGACCCATATCATCGGTCATCCCAG
ACAGAGCGAAGCAGAGAAACATGGCTTTGGCAATTGAACACTACTTCGCTAAATACCAGA
CTTCGAAATGTACTGGCCGTTGTGAAAATAGTGGTAGATCGGTCGTAGTGAGAGATGGGA
CAATCTGCAAATGCCTTTGTGCCCCTGGTCGTTCAGGATCATCATGTGAAAATTGATCAG
CTCAACTTAAAAACTGTAAATAGATCACCATGGGCGTTTTACCACATAAAAACGCTAAAT
CTTCACTCTTGTATATACAACATCTGGATCCATAATAATCTTGCAAACCAAGAGACAGTA
TACACTTAACAGAAGCTTTATTTCCAACAGCAAATTGACAACACCGCAACCAACCACGTT
AAGCACCTTCGGTGAAGGAATGAACTGAATTTTCCAAGCAGTAATAGTACGGTTTAACTG
AATATAAACACAATAATACATGTACGCCATTCAAA

InterProScan

SUPERFAMILY	TSP1_rpt_sf (IPR036383) - T[33-88] 3.14E-9 - T[90-135] 3.27E-6
Gene3D	TSP1_rpt_sf (IPR036383) - T[35-89] 1.6E-11 - T[90-139] 6.6E-7
ProSiteProfiles	TSP1_rpt (IPR000884) - T[36-89] 12.172 - T[91-146] 10.655
SMART	TSP1_rpt (IPR000884) - T[39-89] 6.6E-10 - T[94-146] 3.1E-4
Pfam	TSP1_rpt (IPR000884) - T[40-88] 6.1E-5 - T[95-144] 1.2E-4
PRINTS	MAC_perforin (IPR001862) - T[112-128] 1.8E-23 - T[157-177] 1.8E-23 - T[356-378] 1.8E-23 - T[483-502] 1.8E-23 - T[532-552] 1.8E-23
SUPERFAMILY	LDL_receptor-like_sf (IPR036055) - T[150-195] 3.01E-8
ProSiteProfiles	LDrepeatLR_classA_rpt (IPR002172) - T[150-187] 11.663
SMART	LDrepeatLR_classA_rpt (IPR002172) - T[150-188] 3.3E-8
Pfam	LDrepeatLR_classA_rpt (IPR002172) - T[150-186] 3.3E-7
CDD	LDrepeatLR_classA_rpt (IPR002172) - T[151-186] 4.74222E-8
ProSitePatterns	LDLR_class-A_CS (IPR023415) - T[164-186] .
ProSiteProfiles	MACPF (IPR020864) - T[189-534] 28.435
Pfam	MACPF (IPR020864) - T[321-522] 2.7E-37
SMART	MACPF (IPR020864) - T[325-524] 5.7E-30
ProSitePatterns	MACPF_CS (IPR020863) - T[367-378] .
ProSitePatterns	EGF-like_CS (IPR013032) - T[552-563] .