- Transcript 'KH2012:KH.C10.126.v1...' >
- Transcript 'KH2012:KH.C14.377.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.377.v1.A.nonSL2-1
Possible name(s)
ALX1; ARX; OTP
Gene model
Location
KhC14 [3,779,890 / 3,783,231]
Amino acid sequence
Length: 485
>KH.C14.377.v1.A.nonSL2-1
VKMDSLIFESPKCDSHKIYEQDTVRMFDQTNQGWSDQCETTSCQFENQNCGKQQRYRHSI
ERCRFNEYGYERETPFPWSYDVSGVEATNENSSPPNAPGSNDSLSFTSPYEQYMEMNYDC
DTSTSEYENKETSAEQIPISANFDHFDPKLAALQKLVENQSSKKTWSCAQQENLPHSTIS
VKKIESPKVSFKEEREDKPSTKNTSNEINLSPPKQKETTKLTQPTLDQTKQSNTPKQTNQ
LNAQKIKTPQKIPDSKKQEIMKKSEVTKSKRHRTRFAPSQLSELERSFSSTHYPDIFMRE
EIAHRIGLTESRVQVWFQNRRAKWKKRKAATSCGNPWPFQTAPAGNSFPFSGQVYQNSPS
SAMAAAFANESFYALQNSAEGFGKDINYGSNCMGPTTFPGQVMDMTSRVSDDVIAPNHPH
EDMYQTFPEYPPTNVNYPHKSFYPPDDVSGEFTEKRVSNSPSQTHVTQRSFPMQSNPMPL
YGAHY
Nucleotide sequence
Length: 1,898
>KH2012:KH.C14.377.v1.A.nonSL2-1
TTTTTAAGTAAAGATGGATTCTTTAATATTTGAATCTCCAAAATGTGACTCACACAAAAT
TTATGAACAAGATACTGTGAGAATGTTCGACCAAACAAACCAGGGATGGTCTGACCAATG
TGAGACCACTTCGTGCCAATTTGAAAACCAAAATTGTGGCAAACAACAACGATATCGGCA
TAGTATTGAAAGATGTCGATTTAACGAGTACGGCTACGAAAGAGAAACACCTTTTCCATG
GAGCTATGACGTGAGCGGCGTCGAAGCGACAAACGAGAACAGTTCCCCCCCAAACGCTCC
TGGAAGTAACGATTCACTGTCATTCACATCGCCCTATGAGCAGTATATGGAGATGAACTA
CGACTGCGACACCAGTACGAGTGAATACGAAAACAAAGAGACATCAGCTGAGCAAATTCC
TATTTCGGCAAATTTTGACCATTTTGACCCCAAACTTGCAGCGCTACAAAAACTTGTGGA
AAACCAAAGCAGCAAAAAGACTTGGAGTTGTGCCCAACAAGAAAATTTACCACATTCTAC
AATAAGCGTGAAGAAAATAGAATCACCGAAAGTCAGCTTCAAAGAGGAGAGAGAAGATAA
ACCATCAACGAAAAACACAAGCAACGAAATTAACTTATCGCCTCCGAAACAGAAAGAAAC
AACCAAACTAACTCAACCCACACTAGACCAAACCAAGCAATCAAACACCCCAAAACAAAC
GAACCAACTAAACGCCCAAAAAATAAAGACACCACAGAAAATCCCGGATTCGAAAAAACA
AGAAATTATGAAGAAATCGGAAGTTACGAAATCCAAGCGCCATAGAACACGTTTTGCTCC
GTCGCAATTAAGTGAGCTTGAGAGAAGTTTTTCATCCACGCATTATCCCGACATCTTTAT
GAGAGAAGAGATTGCTCATCGTATTGGACTTACAGAGTCCCGGGTTCAGGTTTGGTTTCA
AAACCGCAGAGCAAAATGGAAGAAGCGAAAGGCAGCGACGTCTTGCGGTAACCCTTGGCC
GTTTCAAACCGCACCTGCGGGAAATAGCTTCCCGTTTTCCGGCCAGGTTTACCAAAACAG
TCCAAGCTCGGCAATGGCAGCGGCGTTTGCCAACGAGAGCTTTTATGCGCTACAGAATTC
CGCAGAAGGTTTTGGGAAAGATATCAACTACGGTAGTAACTGCATGGGACCAACTACTTT
CCCTGGACAAGTAATGGACATGACGTCACGAGTATCTGATGACGTCATTGCACCTAACCA
TCCGCACGAAGATATGTATCAAACATTTCCGGAGTACCCCCCAACCAACGTCAACTATCC
CCACAAATCCTTCTACCCTCCCGATGACGTAAGCGGGGAGTTCACCGAAAAACGCGTCTC
CAATTCGCCGAGCCAAACCCACGTGACCCAACGGTCATTTCCCATGCAAAGCAATCCAAT
GCCGTTGTATGGCGCACACTACTGAAATCTTGACGTCATTTTACGTTTTCTGTAAATCAT
ACGTTTGTTACATCGTCGTGACGTCATAATACAGCACCTTGCGCGGTAGTAAGCGCAATA
AACGAAAAGCCATTGCAGTGGATTCCCTTTATTTACAGCGCCATTAACAGCCATTAATTA
CACGTATTCAGTCTGCCACTCGACTCCCAGAAGGGCAGTCTACATTTGTCAAGACGAAGC
GATGTGAAAATGAGACAGCTTTTGCTGCTTCATCCAGTGATTAATGACACAAAGGGACGG
TTAGCAATACTTCGGGTGGAATAGAATTCAGTGTGTTTGGATATTGTGTGTTAAAGATGT
CTCATCTCTCCCCACTACTATATATGTCACATGTTAAAAAAATGTCAAGGTTCCCACATA
CATTCATACATTTAAAAAAGACAGAAATTTAAATCCCC
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[264-330] 2.45E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[267-327] 20.585 |
| SMART |
Homeobox_dom (IPR001356) - T[269-331] 7.7E-28 |
| Pfam |
Homeobox_dom (IPR001356) - T[270-326] 6.7E-24 |
| CDD |
Homeobox_dom (IPR001356) - T[270-328] 1.32824E-23 |
| PRINTS |
HTH_motif (IPR000047) - T[298-307] 2.9E-5 - T[307-323] 2.9E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[302-325] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARX_HUMAN | 64.615 % | 97.4 | 1.57E-21 |
| ALX1_HUMAN | 62.903 % | 92.8 | 7.8E-21 |
| OTP_HUMAN | 86.275 % | 98.2 | 1.41E-22 |