- Region 'REG00000517' >
- Transcript 'KH2012:KH.C14.377.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.377.v1.R.nonSL1-1
Possible name(s)
ALX1; ARX; OTP
Gene model
Location
KhC14 [3,779,890 / 3,783,251]
Amino acid sequence
Length: 485
>KH.C14.377.v1.R.nonSL1-1
VKMDSLIFESPKCDSHKIYEQDTVRMFDQTNQGWSDQCETTSCQFENQNCGKQQRYRHSI
ERCRFNEYGYERETPFPWSYDVSGVEATNENSSPPNAPGSNDSLSFTSPYEQYMEMNYDC
DTSTSEYENKETSAEQIPISANFDHFDPKLAALQKLVENQSSKKTWSCAQQENLPHSTIS
VKKIESPKVSFKEEREDKPSTKNTSNEINLSPPKQKETTKLTQPTLDQTKQSNTPKQTNQ
LNAQKIKTPQKIPDSKKQEIMKKSEVTKSKRHRTRFAPSQLSELERSFSSTHYPDIFMRE
EIAHRIGLTESRVQVWFQNRRAKWKKRKAATSCGNPWPFQTAPAGNSFPFSGQVYQNSPS
SAMAAAFANESFYALQNSAEGFGKDINYGSNCMGPTTFPGQVMDMTSRVSDDVIAPNHPH
EDMYQTFPEYPPTNVNYPHKSFYPPDDVSGEFTEKRVSNSPSQTHVTQRSFPMQSNPMPL
YGAHY
Nucleotide sequence
Length: 1,918
>KH2012:KH.C14.377.v1.R.nonSL1-1
TGTTTAAACCTTTTTTTAGTTTTTTAAGTAAAGATGGATTCTTTAATATTTGAATCTCCA
AAATGTGACTCACACAAAATTTATGAACAAGATACTGTGAGAATGTTCGACCAAACAAAC
CAGGGATGGTCTGACCAATGTGAGACCACTTCGTGCCAATTTGAAAACCAAAATTGTGGC
AAACAACAACGATATCGGCATAGTATTGAAAGATGTCGATTTAACGAGTACGGCTACGAA
AGAGAAACACCTTTTCCATGGAGCTATGACGTGAGCGGCGTCGAAGCGACAAACGAGAAC
AGTTCCCCCCCAAACGCTCCTGGAAGTAACGATTCACTGTCATTCACATCGCCCTATGAG
CAGTATATGGAGATGAACTACGACTGCGACACCAGTACGAGTGAATACGAAAACAAAGAG
ACATCAGCTGAGCAAATTCCTATTTCGGCAAATTTTGACCATTTTGACCCCAAACTTGCA
GCGCTACAAAAACTTGTGGAAAACCAAAGCAGCAAAAAGACTTGGAGTTGTGCCCAACAA
GAAAATTTACCACATTCTACAATAAGCGTGAAGAAAATAGAATCACCGAAAGTCAGCTTC
AAAGAGGAGAGAGAAGATAAACCATCAACGAAAAACACAAGCAACGAAATTAACTTATCG
CCTCCGAAACAGAAAGAAACAACCAAACTAACTCAACCCACACTAGACCAAACCAAGCAA
TCAAACACCCCAAAACAAACGAACCAACTAAACGCCCAAAAAATAAAGACACCACAGAAA
ATCCCGGATTCGAAAAAACAAGAAATTATGAAGAAATCGGAAGTTACGAAATCCAAGCGC
CATAGAACACGTTTTGCTCCGTCGCAATTAAGTGAGCTTGAGAGAAGTTTTTCATCCACG
CATTATCCCGACATCTTTATGAGAGAAGAGATTGCTCATCGTATTGGACTTACAGAGTCC
CGGGTTCAGGTTTGGTTTCAAAACCGCAGAGCAAAATGGAAGAAGCGAAAGGCAGCGACG
TCTTGCGGTAACCCTTGGCCGTTTCAAACCGCACCTGCGGGAAATAGCTTCCCGTTTTCC
GGCCAGGTTTACCAAAACAGTCCAAGCTCGGCAATGGCAGCGGCGTTTGCCAACGAGAGC
TTTTATGCGCTACAGAATTCCGCAGAAGGTTTTGGGAAAGATATCAACTACGGTAGTAAC
TGCATGGGACCAACTACTTTCCCTGGACAAGTAATGGACATGACGTCACGAGTATCTGAT
GACGTCATTGCACCTAACCATCCGCACGAAGATATGTATCAAACATTTCCGGAGTACCCC
CCAACCAACGTCAACTATCCCCACAAATCCTTCTACCCTCCCGATGACGTAAGCGGGGAG
TTCACCGAAAAACGCGTCTCCAATTCGCCGAGCCAAACCCACGTGACCCAACGGTCATTT
CCCATGCAAAGCAATCCAATGCCGTTGTATGGCGCACACTACTGAAATCTTGACGTCATT
TTACGTTTTCTGTAAATCATACGTTTGTTACATCGTCGTGACGTCATAATACAGCACCTT
GCGCGGTAGTAAGCGCAATAAACGAAAAGCCATTGCAGTGGATTCCCTTTATTTACAGCG
CCATTAACAGCCATTAATTACACGTATTCAGTCTGCCACTCGACTCCCAGAAGGGCAGTC
TACATTTGTCAAGACGAAGCGATGTGAAAATGAGACAGCTTTTGCTGCTTCATCCAGTGA
TTAATGACACAAAGGGACGGTTAGCAATACTTCGGGTGGAATAGAATTCAGTGTGTTTGG
ATATTGTGTGTTAAAGATGTCTCATCTCTCCCCACTACTATATATGTCACATGTTAAAAA
AATGTCAAGGTTCCCACATACATTCATACATTTAAAAAAGACAGAAATTTAAATCCCC
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[264-330] 2.45E-25 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[267-327] 20.585 |
| SMART |
Homeobox_dom (IPR001356) - T[269-331] 7.7E-28 |
| Pfam |
Homeobox_dom (IPR001356) - T[270-326] 6.7E-24 |
| CDD |
Homeobox_dom (IPR001356) - T[270-328] 1.32824E-23 |
| PRINTS |
HTH_motif (IPR000047) - T[298-307] 2.9E-5 - T[307-323] 2.9E-5 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[302-325] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARX_HUMAN | 64.615 % | 97.4 | 1.57E-21 |
| ALX1_HUMAN | 62.903 % | 92.8 | 7.8E-21 |
| OTP_HUMAN | 86.275 % | 98.2 | 1.41E-22 |