- Clone 'AHC0AAA187YC05' >
- Transcript 'KH2012:KH.C14.391.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.391.v1.B.SL1-1
Possible name(s)
SEMA6A; SEMA6B; SEMA6D
Gene model
Location
KhC14 [3,729,307 / 3,743,915]
Amino acid sequence
Length: 1,225
>KH.C14.391.v1.B.SL1-1
LALRECKRIRLQQLPKTSRAYNTLKTTERDGLCQRYACGAAHVPVKAFTGDEVTRDNRLS
YLQLVKRIRMGTNDMLAIASRDQLYFINPEKFRTDNIRDIQYDNSKNMTRELCSMKGQTE
ELCHNFLSVVATTNDEGSELLVCGTNSFSPICTTYTVSYMSSGLVMVRGEDFSGKQRCPY
GPNQPSAAIFTGGSLYAGTYQAFTGVSPVVSRSMGDNTPLKTASIDEAMNRPRFVKMIED
DKRVLVFFNEMQKLSSGEVRMVAQVGQVCKNDVGGDRVLSRMWTTFIKSRLNCSYNGFYL
NELRDVTEAKFVNGVETIFATFSTPEDSLAGAAVCSFTMNAIREALHGAFLVGSDPSAQT
VGTSPAASRHPASCPSEKMTDSELFFIKSHPQMKEQVPGSLLMTNQGSRWTTIALDTKAG
PNDITVILVGTEDGQIIKGLGPNQMWEHGAIISKQDVFDSNRCSSGNPEVEDRRVLSILV
DAERGFLLVGFKHCVVTVPLRTCGVHNCQEECVGSADPYCGWEVRSNSCVPYLTANQGLA
QNVAGALKSPESYGACQPEVEENTNSFVEVQKPIVEVEEMIPKNETTKPEGRDALVPKVN
CVTGVDPCSSKFDLVVVIVAGVGGFIFGVFLTIILIVLYRKKVCCSGFTSNDDDFKKKQL
KQQHLQAMYPDDRRGSLTRTARKTYFGWKEWFCRSSKPNTPAATPSLNNKLDQEHPAERR
PRRLNDYSEAPTLKSTAQPNQHAPKPRRMSSRHNSTSSNGSVPNGYPLTRQASVLANGPI
VYEQGQPLLLNNQTDEAYYSPTTECILTNEMTEAPTLPHPKRISHASMTGEYPITSLHGA
AESGQLPTASTKMRRRNEKATSQTNEIMRESDTAIRSFETTLHHMQQQGIPVDNSRERLN
SNDSGKGESVRNSIRTELEPIATNASAFKQRPTSLNLPQNGVGHRRRLTSEPSYPNDVIT
PTGSISSGSSSGRRNPPVRQHSFGFHQSSSTRSQPTTPVGGAPGKLSVYHPKPSEASEVG
HYATLPKNEQPQVGRRKERQHQQRHHMEQLHERLCPRLQQEFMQQQQQQQQQQQQQQQQM
HKAHMIQEVMKNPRTTEHQNQRRGVVTRSCGSPGKHPAPPLNRYPSLQVRGPNAYQEYQR
MPMLKNQPINHYPSLPHGSSTSPYGKNSNNNNTYGTLTAFERPTTLHRREKLPQMMRQSS
VPGYAAPKPMYVATPVVPPSGTREM
Nucleotide sequence
Length: 4,156
>KH2012:KH.C14.391.v1.B.SL1-1
ATAATAATCGATTTAAAAGGGAAAGTGTTGAACTGATTTGACTTCTGTTGGATTTATTGG
AAGAATCGTTAAACTAACTCGCATTGAGGGAATGCAAAAGAATTAGATTGCAACAACTGC
CGAAGACATCAAGAGCTTATAATACGTTGAAAACAACTGAACGAGATGGCCTTTGCCAAC
GTTATGCTTGTGGTGCTGCTCATGTTCCTGTTAAAGCATTTACCGGCGACGAAGTGACTC
GAGACAACAGATTAAGCTATCTGCAGTTGGTTAAACGGATTCGAATGGGCACCAATGACA
TGCTAGCAATTGCATCAAGGGATCAATTGTACTTCATCAATCCTGAGAAATTTCGCACAG
ACAACATCCGAGACATACAATACGATAATTCTAAAAATATGACGAGAGAATTATGCTCGA
TGAAAGGCCAAACAGAGGAACTGTGTCATAACTTTCTTAGCGTCGTAGCGACCACGAATG
ACGAAGGCAGCGAACTGCTGGTGTGCGGCACCAATTCATTCAGCCCGATATGCACAACAT
ACACGGTCTCCTACATGTCATCTGGTTTAGTGATGGTTCGTGGAGAAGATTTCTCCGGCA
AGCAGAGATGCCCTTATGGTCCTAATCAACCTAGCGCGGCAATTTTTACCGGTGGTTCGT
TGTACGCGGGAACCTACCAAGCTTTTACTGGTGTTTCTCCCGTTGTCTCGCGAAGCATGG
GCGACAACACACCGCTTAAGACTGCCTCTATTGACGAAGCCATGAATCGTCCCCGGTTTG
TAAAAATGATCGAAGACGACAAACGGGTTCTTGTTTTCTTTAACGAAATGCAGAAGCTGT
CGTCGGGGGAAGTCCGTATGGTGGCGCAAGTGGGACAGGTTTGCAAAAACGACGTTGGTG
GAGACCGTGTGTTATCTCGTATGTGGACAACCTTTATTAAATCGCGACTCAATTGTTCTT
ACAATGGTTTTTACCTGAATGAACTTCGTGACGTCACAGAAGCAAAATTCGTAAACGGAG
TGGAAACAATTTTCGCCACTTTTTCGACACCTGAAGATTCTTTGGCTGGAGCAGCCGTGT
GTTCTTTCACAATGAACGCAATACGAGAAGCACTACATGGAGCTTTCTTGGTCGGTAGCG
ACCCTTCAGCACAAACAGTGGGGACATCTCCAGCAGCTTCTAGACACCCAGCATCTTGTC
CAAGTGAAAAGATGACAGATTCGGAGCTCTTCTTTATCAAATCACATCCACAGATGAAAG
AACAGGTCCCTGGTTCGTTGTTAATGACCAACCAAGGTTCAAGATGGACGACCATAGCGC
TAGACACCAAAGCGGGCCCGAATGACATCACAGTGATCCTTGTTGGCACAGAAGACGGTC
AAATAATCAAAGGATTGGGTCCAAACCAAATGTGGGAGCATGGGGCTATCATTTCAAAAC
AAGATGTTTTTGACAGCAACAGATGTTCCTCTGGTAATCCCGAAGTAGAGGATAGAAGAG
TGTTGAGCATTCTGGTCGACGCTGAACGTGGATTTCTTCTGGTTGGTTTCAAGCATTGCG
TAGTTACCGTTCCATTGAGGACATGCGGAGTTCACAATTGCCAAGAAGAATGTGTTGGTT
CTGCTGATCCTTATTGTGGGTGGGAGGTACGATCGAACTCCTGTGTACCTTATCTGACGG
CGAACCAGGGCCTCGCACAAAACGTAGCTGGTGCTCTTAAGTCGCCAGAATCATACGGTG
CATGCCAACCTGAGGTGGAAGAAAACACAAATAGTTTTGTTGAGGTACAAAAACCCATAG
TGGAAGTTGAAGAAATGATACCTAAGAATGAAACCACCAAACCTGAAGGAAGAGATGCCT
TGGTCCCTAAAGTGAATTGCGTTACTGGTGTAGATCCTTGTTCATCTAAGTTTGACTTGG
TGGTTGTTATAGTGGCCGGAGTTGGCGGGTTTATTTTTGGCGTGTTTCTCACCATTATTC
TGATCGTGTTGTACCGAAAGAAAGTTTGTTGTAGCGGGTTCACTTCGAACGATGATGATT
TTAAAAAGAAGCAACTAAAGCAACAACATCTGCAAGCAATGTACCCTGATGATAGACGAG
GTTCTTTGACCAGAACAGCTCGAAAAACCTACTTCGGGTGGAAAGAATGGTTCTGTCGAT
CATCCAAACCAAATACTCCAGCTGCCACACCAAGTCTGAACAATAAATTGGACCAAGAAC
ATCCAGCAGAGCGGCGCCCACGAAGATTAAATGACTACAGTGAGGCTCCTACATTGAAAT
CTACAGCACAGCCTAATCAGCATGCGCCCAAACCAAGACGAATGTCATCTCGACACAACA
GCACAAGCAGCAATGGTTCTGTACCAAACGGATATCCCCTTACACGCCAAGCTAGTGTCC
TTGCAAATGGTCCGATCGTATATGAACAAGGACAACCTCTTCTACTTAACAACCAAACTG
ACGAAGCTTATTATTCTCCAACTACAGAATGTATACTTACCAACGAAATGACCGAAGCCC
CGACCTTACCCCACCCTAAAAGGATCTCCCACGCTTCCATGACAGGGGAATACCCGATTA
CGTCACTCCACGGCGCAGCAGAAAGCGGGCAACTGCCAACTGCGTCGACAAAAATGCGGC
GACGCAACGAAAAAGCAACGAGTCAGACGAACGAAATCATGCGGGAATCGGACACAGCGA
TTCGGAGTTTTGAGACCACACTTCATCACATGCAACAACAAGGAATCCCCGTCGATAATT
CAAGAGAAAGATTGAACTCCAATGACAGCGGTAAAGGGGAAAGCGTTCGTAACTCAATAA
GGACAGAACTCGAGCCAATAGCGACGAATGCATCCGCGTTTAAGCAGCGACCAACTTCTC
TTAATCTTCCACAGAATGGTGTTGGTCATCGTCGACGTCTGACGTCAGAGCCATCTTACC
CCAATGACGTCATCACTCCTACTGGGTCCATTAGCTCAGGCTCGTCATCGGGCCGACGAA
ACCCACCGGTACGTCAGCATTCGTTTGGGTTTCATCAGTCGAGTTCGACTCGTTCCCAAC
CGACTACGCCGGTAGGTGGCGCGCCAGGGAAGCTCTCTGTTTACCACCCGAAGCCCAGCG
AAGCGTCCGAGGTCGGGCATTATGCTACTTTGCCAAAAAATGAGCAACCACAGGTCGGGA
GACGAAAGGAGCGACAACACCAACAGCGTCACCACATGGAGCAACTTCACGAACGTTTGT
GTCCCCGTTTACAGCAAGAATTCATGCAACAACAGCAGCAACAACAGCAACAACAACAGC
AACAACAACAGCAGATGCACAAAGCTCATATGATACAAGAAGTTATGAAGAACCCGAGAA
CAACAGAACATCAAAACCAAAGGCGGGGGGTCGTAACTCGTTCGTGTGGTTCGCCAGGGA
AACACCCTGCACCCCCGCTTAACCGCTACCCCAGTCTTCAAGTTCGGGGTCCCAATGCAT
ATCAAGAATACCAAAGAATGCCCATGTTGAAGAACCAACCAATAAATCATTACCCGTCTT
TGCCGCATGGTTCGTCGACTTCTCCTTATGGGAAGAACAGCAACAACAACAATACATACG
GCACTCTTACAGCATTCGAAAGACCAACAACTTTACACAGGCGCGAAAAACTTCCGCAAA
TGATGCGGCAGTCTTCAGTGCCTGGTTACGCAGCGCCGAAGCCTATGTATGTCGCTACAC
CTGTAGTGCCACCTAGCGGGACAAGGGAAATGTAATGGGAGCGTTGGGTGGCGCTATTGG
CGAGCGATCTGCGGGCAGATTTCCAGCCGATGCGAAAATAAGTTGTTTCACTGCTGATTA
ACGTGTTTTACTTTGCAATTTGTTATAGTTTATTTTTGTAACGATCACGATTTCACTTTG
TTTGCGTTGTGTTTTGTGGAAAAAATTAAACCTTTTAATCGCTTGAAAATTCCACGACGA
ACCCTATTCAGTTTAAAAACCTTTTTTTTCACACTTTGTACTCAGTACAATTTCGCTGGG
GTAAAAATTCATCAGCGCTAGATTACTTTTAAATTGCTTTATACAGTACGCCCAAACATT
CGATTTTTCCGTTGTGTTTTTCCACTGTGCTCTCTCATCGACGCGGATTAAATTCAATTA
AAACTGCTAGAAGCAA
| ProSiteProfiles |
Semap_dom (IPR001627) - T[29-500] 63.057 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[35-501] 1.6E-102 |
| SMART |
Semap_dom (IPR001627) - T[64-473] 3.7E-56 |
| PANTHER |
Semaphorin (IPR027231) - T[72-1143] 2.3E-108 |
| SUPERFAMILY |
Semap_dom_sf (IPR036352) - T[72-506] 1.12E-80 |
| Pfam |
Semap_dom (IPR001627) - T[73-461] 7.0E-78 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SEM6A_HUMAN | 32.865 % | 286 | 1.26E-80 |
| SEM6D_HUMAN | 30.734 % | 282 | 4.54E-79 |
| SEM6B_HUMAN | 32.228 % | 261 | 9.07E-73 |