- Transcript 'KH2012:KH.C14.415.v2...'
Transcript Model
Transcript Id
KH2012:KH.C14.415.v2.A.SL1-1
Possible name(s)
AP2B1; AP3D1; COPB1
Gene model
Location
KhC14 [2,288,682 / 2,303,524]
Amino acid sequence
Length: 969
>KH.C14.415.v2.A.SL1-1
VYCLVMTSAESICYTLINSSSITDEPTNETNLKNEIEHGDVRTKTDALKKVILMTLNGEK
LQGLLMTIIKYLLPSDDHTIKKLLLIFWEIWPKTDNEGKLRPEMILVCDAYRKDLQHPNE
FIRGSTLRFLCKLRQPELIEPLMPAIRSCLEHRHSYVRRNAVLAIYTIYRKFDQLIPDAP
ELIHEFLEGEKDASCKRNAFMMLIHADQERALDYLSTCIDQVNTFNDILQLVIVELVYKV
CHANPNERARFIRCIYNLLQSSSQAVRYEAAGTLVTLSNAPTAVRAAAQCYIELIVKEAD
NNVKLIVLDRLVELKNHPLHEKVLQELVMDILRALSSPDLEVRRKTLDLALDLVSSRNVE
DLVKFLEKEVTKSSDVQGHDNTDKYRQLLVKTMHACTVKFPDTAALVIPVLMEFLGDSEE
LAAADVLVFVREAVHRHEQHKPLILDKLLEVFPSIRTVKILRGVLWILGEYCEGTTRILR
FVTEVRKSVGELPMVETELKLAAGEEVEKEEETEKTEKSSSSRRVTEMGTYVTQSAFSVA
NTKSGNKSQQNRPPLRQFFMDGDFSLAGALSTSLTKQALRFLLTCPDPRKQNSFIAESML
ILSSVMHLGRSNLPKKPISDDEIDRLTVCLKVLADRNETMAEIFTSKCRGSLSHLLEIRA
AEESVQRRVAERTKTALTAVQPDDPINFAQLLAKAESGSLEDQFELSLSAAVGTLNQKKE
ARDPTASKLNKVTQLTGFSDPVYAEAYVHINQYDIVLDVLIVNQTSDTLQNCTVELATLG
DLKLVEKPSPLTLAPHDFANIKASVKVASTENGIIFGNIVYDVTGAVSDRNCVVLNDIHI
DIMDYIQPATCSDAEFRQMWAEFEWENKVTVNTNMSDLVNFLHHILKSTNMKCLTPEKAL
GGESGFLAANLFAKSIFGESALANVSIEKPLGKPPGTPVAGHIRIRAKSQGMALSLGDKI
NLSQKKTKK
Nucleotide sequence
Length: 3,239
>KH2012:KH.C14.415.v2.A.SL1-1
TTGGTTAGGTTTATTGCTTAGTCATGACGTCTGCGGAGAGTATCTGCTACACTCTTATTA
ACAGTTCCTCAATAACTGATGAACCAACAAACGAAACAAACCTTAAGAATGAGATCGAAC
ATGGAGATGTGAGAACAAAGACTGATGCACTGAAGAAGGTCATCCTTATGACTCTGAATG
GGGAAAAGCTGCAAGGTCTATTAATGACCATAATAAAATACCTACTCCCATCTGATGACC
ACACTATCAAGAAGCTCTTGCTGATTTTCTGGGAGATTTGGCCGAAAACCGACAATGAGG
GAAAACTACGTCCAGAGATGATCTTAGTTTGTGATGCTTACAGAAAGGATTTACAACATC
CCAATGAATTCATTCGAGGTTCTACTCTTCGATTTCTCTGTAAACTTCGACAGCCAGAGC
TAATAGAGCCGTTAATGCCAGCAATTCGTTCTTGTCTTGAGCACAGACATAGCTATGTGC
GCAGGAATGCTGTACTTGCAATTTACACGATATACAGAAAGTTCGATCAACTGATTCCTG
ATGCTCCAGAGTTGATCCACGAGTTCCTGGAAGGAGAGAAGGATGCATCGTGTAAAAGAA
ATGCTTTCATGATGCTCATCCATGCAGACCAAGAAAGAGCTCTGGATTATCTCAGTACTT
GCATAGATCAGGTGAACACTTTTAATGATATTCTGCAACTTGTGATCGTGGAGCTTGTGT
ACAAAGTATGCCACGCTAACCCCAATGAACGTGCTCGGTTCATTCGTTGCATTTACAATT
TACTTCAATCATCGAGCCAAGCTGTAAGATATGAAGCTGCTGGTACATTGGTTACTTTAT
CTAATGCACCAACTGCTGTACGTGCTGCTGCTCAGTGCTACATAGAACTTATAGTAAAGG
AGGCCGACAACAACGTGAAGCTTATTGTTCTTGATCGACTTGTGGAACTCAAGAATCACC
CACTCCATGAGAAAGTGCTACAGGAATTGGTGATGGATATATTGAGAGCTCTTAGCTCCC
CTGATCTAGAAGTAAGAAGAAAAACTCTTGATCTTGCTCTGGACCTTGTTTCCTCCAGGA
ATGTCGAGGATTTGGTCAAATTCCTTGAAAAAGAGGTCACCAAATCATCAGATGTACAAG
GCCACGATAACACAGATAAATATCGTCAGCTTCTTGTAAAGACAATGCATGCTTGCACTG
TTAAGTTTCCAGACACTGCTGCTCTTGTTATTCCAGTGTTAATGGAGTTCCTGGGTGATA
GTGAAGAGTTGGCTGCTGCTGATGTTTTGGTTTTTGTACGTGAAGCTGTCCATCGACATG
AGCAACATAAACCACTTATACTTGACAAGCTGTTGGAAGTATTCCCATCCATTCGAACTG
TCAAGATTCTGCGTGGTGTTTTGTGGATCTTGGGTGAGTATTGTGAGGGAACAACTAGAA
TCCTTCGATTTGTTACTGAAGTCCGGAAATCAGTCGGAGAACTTCCGATGGTGGAAACGG
AGCTCAAACTCGCTGCTGGGGAAGAAGTAGAAAAGGAGGAGGAAACAGAAAAAACTGAAA
AGTCATCATCTTCACGCCGGGTCACCGAAATGGGAACGTACGTCACCCAATCAGCTTTCA
GTGTCGCAAACACAAAATCCGGCAACAAATCTCAGCAAAATCGACCTCCACTGCGCCAGT
TTTTCATGGATGGGGACTTTTCACTAGCAGGAGCGCTCTCCACATCTCTTACAAAGCAAG
CTCTCAGATTCCTCCTTACCTGCCCCGACCCTCGCAAACAAAATTCCTTTATTGCTGAGA
GCATGCTAATATTATCAAGTGTGATGCACCTTGGTCGATCCAATCTCCCAAAGAAACCAA
TTAGTGATGATGAAATAGACCGACTCACTGTTTGCCTCAAGGTGCTGGCAGACCGCAATG
AAACAATGGCTGAAATCTTCACTTCAAAATGTCGCGGCTCCCTTTCACATTTGCTGGAGA
TTCGAGCTGCTGAGGAAAGTGTCCAGCGGAGGGTAGCAGAGAGAACCAAGACTGCTCTAA
CTGCTGTTCAGCCTGATGATCCCATCAACTTCGCTCAACTACTTGCCAAAGCTGAATCTG
GTTCTCTAGAAGATCAGTTTGAACTCAGTCTGAGTGCAGCTGTGGGGACTCTTAACCAGA
AAAAAGAAGCAAGAGATCCGACTGCTTCAAAACTGAACAAGGTCACACAACTGACTGGAT
TTTCTGACCCAGTATATGCTGAAGCCTATGTACATATCAATCAATATGATATTGTACTTG
ATGTATTGATTGTCAATCAAACTTCGGATACTTTACAAAACTGTACTGTAGAACTGGCTA
CACTAGGTGACTTGAAACTTGTTGAAAAACCAAGTCCGCTGACACTGGCACCTCATGACT
TTGCAAACATTAAAGCAAGTGTCAAAGTGGCTTCAACAGAGAATGGAATCATATTTGGAA
ATATCGTTTATGATGTAACAGGCGCTGTAAGCGACCGTAACTGTGTGGTACTCAATGATA
TACATATTGATATAATGGATTATATACAACCTGCAACATGCTCCGATGCTGAATTCAGGC
AAATGTGGGCTGAATTTGAATGGGAAAACAAAGTAACCGTCAACACTAACATGAGTGACT
TGGTTAACTTCTTGCATCATATACTTAAGTCTACAAACATGAAGTGCTTGACCCCTGAAA
AAGCTTTAGGTGGAGAGTCTGGCTTTTTAGCTGCCAATCTATTTGCGAAGTCGATTTTCG
GTGAGAGTGCGCTAGCCAATGTCAGTATTGAAAAACCTTTAGGAAAACCTCCAGGCACCC
CGGTTGCAGGACATATACGAATACGAGCTAAAAGCCAGGGCATGGCTCTCAGCCTTGGCG
ACAAAATCAACTTGTCCCAAAAGAAAACCAAGAAATAACAGCAGCTAAATCTTGAATGCT
TTTAAAAACTATTTCTGGGTCTCTTATCCCTCTGCGACGCAAATGCATTTGCCCGTTCCG
TTATGAGTGCTCTTAGATTGTGTAGCATTTATCATTGTACAGATTTGCATATATATGATA
CAGAAAATGGCTTAGGTATGTCGAAAGCAACTTTGCAGCACCAAATAAAAGCAAATGTAA
CAGAAAAGGATTTTTTAATCTTAAAGGTTGTCTTATCATACAACGTAAATACTCGCTAAT
TTCTAATGTTAAAATCTAACTCTACGTTTTACACACATGATTTAATTGTTCTACTTTTA
| PIRSF |
COPB1 (IPR016460) - T[6-969] 0.0 |
| PANTHER |
COPB1 (IPR016460) - T[6-967] 0.0 |
| Gene3D |
ARM-like (IPR011989) - T[21-556] 2.6E-97 |
| Pfam |
Clathrin/coatomer_adapt-like_N (IPR002553) - T[27-534] 6.7E-116 |
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[31-474] 8.13E-80 - T[544-578] 8.13E-80 |
| Pfam |
Coatomer_bsu_C (IPR011710) - T[682-823] 5.5E-60 |
| Pfam |
COPB1_appendage_platform_dom (IPR029446) - T[829-960] 5.3E-59 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| AP3D1_HUMAN | 23.747 % | 82.8 | 6.15E-16 |
| COPB_HUMAN | 72.141 % | 1438 | 0 |