Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C14.422.v1.A.SL1-1

Possible name(s)

IDH3A; IDH3B; IDH3G

Gene model

KH2012:KH.C14.422

Location

KhC14 [4,149,820 / 4,151,455]

Sequences

Amino acid sequence

Length: 376

>KH.C14.422.v1.A.SL1-1
KSVTSVMASTLVKSVTRRLPLFFARNGYATSAKPAVPETEEQRICTMIPGDGIGPEISDS
VMKIFDAAGAPISWEERNVTAMKGPGGKWIIPIEAQESINKNKVGLKGPLGTPIAAGHPS
MNLLLRKTFDLYANVRPCVSLDGYKTPYDGVNLVTIRENTEGEYSGIEHAIVDGVVQSIK
LITEEASRKVAEFAFXYARKNARKNVTVVHKANIMRMTDGLFLRCCRETAEKNRDIKFNE
MYLDTVCLNIVQDPSQFDVLVMPNLYGDILSDLCAGLIGGLGVTPSGNIGANGTALFESV
HGTAPDIAGKDLANPTALLLSAIMMLRHLGKMNYAGRIEQACFDAIREKKSRTKDLGGDA
TCSKFTNEVCLRVKDL

Nucleotide sequence

Length: 1,635

>KH2012:KH.C14.422.v1.A.SL1-1
GTTCCTCGTTTTTTATTTATTTAAAAATCTGTTACAAGCGTCATGGCATCAACTTTAGTT
AAATCTGTAACTCGACGTCTGCCGTTATTTTTCGCTCGAAATGGTTACGCAACCTCAGCC
AAACCCGCCGTTCCCGAAACTGAAGAACAAAGAATCTGCACCATGATTCCTGGGGATGGA
ATTGGACCAGAGATCTCAGATTCGGTAATGAAGATCTTTGATGCAGCTGGAGCGCCAATC
TCCTGGGAAGAAAGAAATGTGACAGCAATGAAGGGGCCTGGAGGAAAATGGATCATTCCA
ATTGAGGCTCAGGAATCTATTAATAAGAATAAAGTTGGTTTAAAAGGACCTCTTGGCACT
CCAATTGCTGCTGGTCACCCATCTATGAATCTTCTGCTCCGAAAAACATTTGATCTTTAC
GCGAATGTGAGGCCATGTGTGTCATTGGATGGATACAAGACTCCATACGATGGTGTGAAC
TTGGTGACCATAAGAGAAAACACTGAGGGGGAATACTCGGGCATAGAGCACGCAATTGTG
GACGGCGTGGTGCAAAGTATTAAGCTTATAACTGAAGAAGCTTCACGTAAAGTTGCAGAG
TTTGCGTTTNNTTACGCCCGCAAGAATGCGCGTAAAAATGTCACTGTGGTCCATAAAGCC
AACATCATGAGAATGACGGATGGCTTGTTCTTAAGATGCTGCAGGGAAACTGCTGAGAAG
AACAGAGACATCAAGTTCAACGAGATGTATCTTGATACTGTGTGTCTTAACATTGTACAA
GATCCATCTCAGTTTGACGTCCTCGTGATGCCAAACTTATACGGCGATATTTTAAGTGAT
CTGTGCGCTGGTCTCATTGGTGGCTTGGGAGTTACCCCAAGTGGTAACATTGGTGCTAAT
GGAACGGCTCTATTTGAATCTGTGCATGGTACGGCACCAGATATCGCAGGGAAGGACCTA
GCTAACCCAACTGCGCTTCTGCTTTCTGCCATAATGATGCTTAGACACCTGGGGAAGATG
AATTACGCTGGTAGGATCGAGCAGGCTTGTTTCGACGCGATTAGAGAGAAGAAATCGCGC
ACTAAAGATCTTGGGGGTGACGCCACATGCTCAAAGTTCACAAATGAAGTTTGCCTCAGA
GTAAAAGATTTGTAAACTCCATAAAGTTCATGTTATCTTGATTACTGTGACCTCTGTAAC
TTGTAGTTCTACTTATTTCTGCTCTGTCCACAATGCAGTTGAAATAATATACAAAATGTT
CAAATTGCACCATAGATAGCTTTGATATTGCCAGTTTGTTTTTGTTGTCAATATGGTTCA
TTTGCTGCTTCATTGTTGATTACAAACTGTTTTGTTACATCATCGTGTTTTAATTTATAA
AATATCCGAGATTTGACAAAAACAGAAACGAGAAAAACTAAATAACAAAACAGTTTAAAT
TTAGCCTCTAAATAACAAACCAACAAGTCTGATATTTAAAATGGTTTCATATGGCCACTA
ATTAACAGGTTAAAAGGTGCATCTATAATGTGCTAATGCTTTCGATTTGAAATAATCAAC
ACGTAAATCAAAATGCTAAGTTTAGTAGAATTTTACGTAAAACGCATATTATCCCATAAC
AAGTTATTTATAAAA

InterProScan

TIGRFAM	Isocitrate_DH_NAD (IPR004434) - T[43-372] 5.9E-148
SMART	IsoPropMal-DH-like_dom (IPR024084) - T[43-369] 1.4E-165
Pfam	IsoPropMal-DH-like_dom (IPR024084) - T[46-369] 1.6E-104
ProSitePatterns	IsoCit/isopropylmalate_DH_CS (IPR019818) - T[264-283] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
IDH3G_HUMAN	41.808 %	277	1.86E-90
IDH3B_HUMAN	43.902 %	273	3.59E-89
IDH3A_HUMAN	81.873 %	575	0