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- Transcript 'KH2012:KH.C14.505.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.505.v1.R.ND1-1
Possible name(s)
HMCN1; THBS1; THBS2
Gene model
Location
KhC14 [1,678,202 / 1,681,959]
Amino acid sequence
Length: 714
>KH.C14.505.v1.R.ND1-1
CLIVILAIATVVLAERQCEIARRNIVSLGTYVEGHQTIACIDPCDRTGKVISNNETQCSE
RPYCHWNGTWCFMKTVPPPTTMTNNKTQVLEELSSRLDRNRTVDVHGRSANGDTRDCTTT
TFPDSCNINVEHSNMSELLIPPYDIPYCQRVPCVDADENADNDEKTCLLHPGCYFDRELS
AFRKYYGHAVMPGIPVCHQVIRNDRFLQIAQNLMTVGNYTWNALHTNCLLREYHEEIFEA
PTGCYILTYLEFADIYPKHYGWKDINVTACVLIGGCYFGPNRCYYPANPYANMQISSNME
AVARRKPSFRDEYGQQMCRPISMELKGAQYLSAYDNCLKAGCAIHPSVGKELLDNLHIVT
MESVPRAYQPQFWGKAVIGEVRADNWIAEADRMVSCGTLNTSNPFGVHYASGSNINLTQL
LSNSNNFSSPNRKRNPLEYFFRLLIQRLRCPYLNYFNLEGFQPMRGSFEGCCDRTLCYTP
REDILGQYSGSASYWSPWEHWLSCSRSCGSGVQVRRRVCIGRFEENHCAGDAVMEKPCSI
EVCPKWSQWSSWGACTDSCGGGQKLRVRVCLLPPCEEAREERTRCSTDDCPLFGQWGTWS
ACSLTCGIGINSRRRTCNDSMTSVTCPANTHNEVLDTRPCHEYCGSPVRISVGSCSPYPY
CVSIVQQKCEYVTPNGVAVNGHCRNFKRRKKIRCMDLWRSCTWCAVYQCEQLDT
Nucleotide sequence
Length: 2,191
>KH2012:KH.C14.505.v1.R.ND1-1
AATGCTTAATAGTTATTCTAGCAATAGCAACGGTTGTACTAGCTGAGCGCCAATGTGAAA
TCGCTAGAAGAAATATAGTGTCCTTGGGTACTTATGTAGAAGGACATCAAACTATTGCAT
GTATTGACCCATGCGATAGAACAGGGAAGGTAATCTCAAACAATGAAACGCAGTGTTCGG
AGCGTCCATACTGCCACTGGAACGGCACATGGTGTTTTATGAAAACAGTACCGCCCCCAA
CAACGATGACAAATAACAAGACTCAAGTTTTGGAAGAATTATCCTCGAGGCTCGACAGAA
ATAGAACTGTCGACGTACACGGTCGTTCAGCAAATGGGGACACGAGAGACTGCACAACAA
CAACCTTTCCAGACAGCTGTAATATCAATGTTGAACATTCAAATATGTCAGAATTACTCA
TCCCACCGTACGACATACCATACTGCCAAAGGGTTCCATGCGTTGATGCGGACGAGAATG
CAGACAACGACGAGAAGACGTGTCTCTTACACCCTGGATGTTATTTCGATAGAGAACTTT
CAGCATTTCGAAAATATTACGGTCATGCTGTTATGCCTGGGATTCCAGTTTGTCATCAAG
TTATACGAAACGATCGGTTTCTGCAAATCGCACAAAACCTAATGACCGTGGGCAATTATA
CGTGGAATGCCTTACACACGAACTGTTTACTGCGAGAGTACCATGAAGAAATTTTCGAGG
CGCCAACCGGATGTTACATATTGACATACCTGGAATTTGCTGATATCTATCCGAAACACT
ATGGCTGGAAAGATATCAATGTAACGGCCTGCGTCTTGATCGGCGGGTGCTACTTTGGAC
CAAACCGGTGCTACTATCCTGCAAACCCATACGCAAACATGCAGATTTCCTCTAACATGG
AAGCTGTTGCAAGGCGGAAACCATCTTTTCGAGACGAATACGGCCAGCAAATGTGTCGGC
CAATTTCGATGGAGTTAAAAGGTGCTCAATACCTCAGCGCATACGATAACTGCCTCAAGG
CGGGGTGTGCTATTCATCCAAGCGTTGGAAAGGAACTTTTAGACAATCTTCATATAGTGA
CCATGGAAAGCGTGCCCCGAGCATACCAACCTCAATTTTGGGGTAAGGCCGTTATTGGAG
AAGTTAGAGCAGATAATTGGATAGCTGAAGCTGACAGAATGGTGTCTTGCGGGACTTTAA
ACACAAGTAATCCGTTTGGAGTCCATTATGCGTCCGGCAGTAATATAAATCTCACCCAGC
TATTAAGCAATAGCAATAACTTCTCAAGCCCGAATCGAAAAAGAAACCCTCTCGAATACT
TTTTTAGACTGCTTATCCAAAGGCTACGATGTCCATATTTAAACTATTTTAACTTGGAAG
GCTTTCAACCGATGAGAGGTAGTTTTGAAGGCTGCTGCGACCGAACACTTTGCTATACAC
CTCGAGAAGACATACTTGGTCAATACTCTGGCTCAGCATCATACTGGTCGCCGTGGGAAC
ATTGGTTAAGCTGTAGCAGGAGCTGTGGTAGTGGTGTTCAAGTAAGACGTCGTGTATGTA
TCGGTCGTTTTGAAGAAAACCATTGCGCTGGAGACGCAGTTATGGAGAAGCCATGTAGTA
TAGAAGTTTGTCCGAAATGGTCGCAATGGTCTAGTTGGGGGGCATGTACAGATAGTTGTG
GTGGCGGACAAAAGTTAAGAGTCCGTGTCTGCCTTCTGCCGCCGTGCGAGGAAGCTCGAG
AAGAGAGGACCCGGTGTTCGACGGATGACTGTCCGCTTTTTGGGCAGTGGGGGACTTGGT
CTGCGTGTTCTTTGACCTGTGGAATTGGTATAAACTCTCGCCGTAGAACTTGTAACGATA
GCATGACTAGTGTAACTTGCCCTGCCAACACCCACAACGAAGTTTTGGACACTAGACCTT
GTCACGAGTACTGTGGCAGTCCTGTTCGAATTAGTGTTGGTTCTTGTAGCCCATACCCGT
ATTGTGTATCAATAGTACAGCAGAAATGTGAATACGTAACGCCTAACGGAGTCGCAGTAA
ACGGACATTGTCGTAATTTTAAAAGACGAAAGAAAATTCGCTGCATGGACCTTTGGCGTT
CCTGTACCTGGTGTGCGGTGTACCAATGCGAGCAACTGGACACATAACTATAAAAATTGT
CGTCGCTGTTTCGAATAAAATCTGGAGCAAA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[492-544] 2.1E-11 - T[545-590] 1.9E-7 - T[592-650] 1.4E-7 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[492-542] 10.827 - T[543-591] 12.352 - T[593-645] 8.784 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[494-543] 4.05E-10 - T[542-586] 9.55E-9 - T[590-641] 2.88E-8 |
| SMART |
TSP1_rpt (IPR000884) - T[495-544] 1.7E-11 - T[546-591] 5.8E-9 - T[593-641] 6.3E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[496-543] 6.3E-10 - T[547-590] 1.2E-4 - T[595-641] 1.4E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 39.86 % | 106 | 2.37E-23 |
| TSP1_HUMAN | 42.254 % | 112 | 3.04E-25 |
| TSP2_HUMAN | 37.589 % | 95.9 | 3.41E-20 |