- Molecular Tool 'Tbx6c mRNA' >
- Transcript 'KH2012:KH.C14.52.v2....' >
- Transcript 'KH2012:KH.C14.52.v1....' >
- Transcript 'KH2012:KH.L116.99.v1...' >
- Transcript 'KH2012:KH.C14.52.v1....'
Transcript Model
Transcript Id
KH2012:KH.C14.52.v1.A.nonSL4-1
Possible name(s)
EEF1A1; EEF1A2; HBS1L
Gene model
Location
KhC14 [782,714 / 786,630]
Amino acid sequence
Length: 464
>KH.C14.52.v1.A.nonSL4-1
PQPSKMKDKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEAAEMGKGSFKY
AWVLDKLKAERERGITIDIALWKFETNNYSITIIDAPGHRDFIKNMITGTSQADCAVLIV
AAGVGEFEAGISKNGQTREHALLAFTLGVKQIIVAVNKMDSTEPKYSQKRFEEISKEVTT
YLKKVGYNPKAVAFVPISGWHGDNMLEESENMSWYKGWSREQDKKTLTGKTLFNALDSIA
PPKRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGVVATFAPVNLSTEVKSVEMHH
ESMTEALPGDNVGFNVKNVSVKDIKRGYVAGDSKNDPPKQAETFTAQVIILNHPGQIHAG
YAPVLDCHTAHIACKFQELKEKIDRRSGKKLEDAPKAVKSGDAAIVVLKPQKPMCVEAFQ
EYPPLGRFAVRDMRNTVAVGVIKSVEKKEVAGKETKSAKKVGKK
Nucleotide sequence
Length: 1,909
>KH2012:KH.C14.52.v1.A.nonSL4-1
CCTTTTCGAGCTGTGGCAATTTGCAAATTTCTGTGCATTCGGTTAACCCCAACCTTCCAA
AATGAAAGACAAGACTCATATTAACATTGTTGTCATCGGTCACGTCGATTCCGGAAAATC
GACCACCACCGGTCACTTGATCTACAAGTGCGGGGGTATTGACAAGCGAGCCATCGAAAA
ATTCGAGAAAGAAGCCGCTGAGATGGGCAAAGGGTCTTTCAAATATGCTTGGGTGTTGGA
CAAACTTAAGGCCGAGCGTGAACGTGGTATCACCATCGATATCGCTTTGTGGAAGTTTGA
AACCAACAATTACTCCATCACTATTATTGATGCTCCCGGTCACAGAGATTTCATCAAGAA
CATGATCACAGGAACATCCCAGGCCGATTGTGCCGTGCTTATTGTTGCTGCTGGTGTTGG
TGAATTTGAAGCCGGTATCTCCAAGAACGGTCAAACACGAGAACACGCTCTGCTTGCGTT
CACCCTTGGGGTCAAGCAAATCATTGTAGCTGTCAACAAGATGGACAGCACGGAGCCAAA
ATACTCCCAAAAGCGTTTCGAAGAAATCAGCAAGGAGGTGACGACTTATTTGAAGAAGGT
CGGTTACAACCCCAAGGCTGTTGCCTTCGTCCCAATTTCTGGTTGGCACGGTGACAACAT
GCTGGAGGAGTCCGAGAACATGTCTTGGTACAAGGGGTGGAGCCGTGAACAAGATAAGAA
AACTTTGACTGGCAAAACCCTCTTCAATGCCTTGGACAGCATTGCCCCACCAAAGAGACC
AACAGACAAGCCTCTTCGTCTCCCACTTCAAGATGTTTACAAAATCGGAGGTATTGGAAC
TGTCCCAGTCGGACGTGTGGAAACTGGCATCTTGAAACCAGGAGTCGTTGCCACATTCGC
TCCAGTTAATCTTTCCACTGAAGTCAAATCTGTAGAGATGCATCACGAGTCTATGACAGA
GGCTCTTCCAGGTGACAACGTTGGTTTCAACGTAAAGAACGTCTCTGTAAAGGACATCAA
GAGAGGTTACGTTGCTGGAGACTCAAAGAACGATCCACCAAAACAGGCTGAAACTTTCAC
AGCTCAAGTTATCATTCTGAACCACCCTGGTCAAATTCATGCTGGATATGCACCAGTGTT
GGATTGTCACACTGCACATATTGCTTGCAAGTTCCAGGAATTGAAGGAGAAGATTGACAG
ACGTAGTGGTAAAAAACTGGAAGATGCACCAAAAGCTGTAAAATCTGGTGATGCCGCCAT
CGTTGTTCTGAAGCCACAAAAACCAATGTGTGTTGAGGCATTCCAAGAATACCCACCACT
TGGTCGTTTCGCTGTCCGTGACATGAGAAACACCGTAGCTGTCGGTGTTATCAAGAGTGT
GGAGAAGAAAGAGGTCGCCGGCAAAGAGACCAAATCTGCCAAGAAAGTCGGCAAGAAGTG
ACTGCAGCCAACGACACCGCCCACCATCACTTCTGCAGTTTTACTCCACCAGCTTGCTCA
CCCTTCTAACCATTTCAGCCTAGTTAAACCCCCAGTTCAATTTGTCAGCCTTTTAAATTG
CGTCATGACATTTCAGTTGTTACTGTGTGCCGCTCTGTCCACATGGTGTAGTTATGTTTT
TCATTACCCCCACCGAAAACACTTTCGTAGGAAAAAACCCTCCGTTTCGTGCCAACTTAA
AAGTGTTATTTTTGTTTCTAGCGCTGCTTAACTTATTTAAAATGACAAGACTATCTATGA
TTTTAAACCATGGCTTTGAATGGCGTACATGTATTATTGTGTTTATATTCAGTTAAACCG
TACTATTACTGCTTGGAAAATTCAGTTCATTCCTTCACCGAAGGTGCTTAACGTGGTTGG
TTGCGGTGTTGTCAATTTGCTGTTGGAAATAAAGCTTCTGTTAAGTGTA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[6-265] 8.58E-81 |
| Hamap |
Transl_elong_EF1A_euk/arc (IPR004539) - T[6-448] 50.824 |
| TIGRFAM |
Transl_elong_EF1A_euk/arc (IPR004539) - T[7-449] 4.9E-220 |
| Pfam |
TF_GTP-bd_dom (IPR000795) - T[9-239] 2.2E-55 |
| ProSiteProfiles |
TF_GTP-bd_dom (IPR000795) - T[9-246] 62.494 |
| PRINTS |
TF_GTP-bd_dom (IPR000795) - T[13-26] 1.3E-24 - T[72-80] 1.3E-24 - T[92-102] 1.3E-24 - T[108-119] 1.3E-24 - T[152-161] 1.3E-24 |
| ProSitePatterns |
G_TR_CS (IPR031157) - T[65-80] . |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[242-338] 4.64E-28 |
| Pfam |
EFTu-like_2 (IPR004161) - T[264-329] 1.2E-11 |
| Pfam |
Transl_elong_EFTu/EF1A_C (IPR004160) - T[338-445] 1.7E-41 |
| SUPERFAMILY |
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[342-445] 4.1E-44 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EF1A1_HUMAN | 83.406 % | 794 | 0 |
| EF1A3_HUMAN | 82.969 % | 790 | 0 |
| EF1A2_HUMAN | 82.314 % | 789 | 0 |