- Transcript 'KH2012:KH.L116.99.v1...' >
- Molecular Tool 'Tbx6c mRNA' >
- Transcript 'KH2012:KH.C14.52.v2....'
Transcript Model
Transcript Id
KH2012:KH.C14.52.v2.A.nonSL13-1
Possible name(s)
EEF1A1; EEF1A2; HBS1L
Gene model
Location
KhC14 [782,714 / 786,335]
Amino acid sequence
Length: 461
>KH.C14.52.v2.A.nonSL13-1
SKMKDKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEAAEMGKGSFKYAWV
LDKLKAERERGITIDIALWKFETNNYSITIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
VGEFEAGISKNGQTREHALLAFTLGVKQIIVAVNKMDSTEPKYSQKRFEEISKEVTTYLK
KVGYNPKAVAFVPISGWHGDNMLEESENMSWYKGWSREQDKKTLTGKTLFNALDSIAPPK
RPTDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGVVATFAPVNLSTEVKSVEMHHESM
TEALPGDNVGFNVKNVSVKDIKRGYVAGDSKNDPPKQAETFTAQVIILNHPGQIHAGYAP
VLDCHTAHIACKFQELKEKIDRRSGKKLEDAPKAVKSGDAAIVVLKPQKPMCVEAFQEYP
PLGRFAVRDMRNTVAVGVIKSVEKKEVAGKETKSAKKVGKK
Nucleotide sequence
Length: 1,856
>KH2012:KH.C14.52.v2.A.nonSL13-1
CTTCCAAAATGAAAGACAAGACTCATATTAACATTGTTGTCATCGGTCACGTCGATTCCG
GAAAATCGACCACCACCGGTCACTTGATCTACAAGTGCGGGGGTATTGACAAGCGAGCCA
TCGAAAAATTCGAGAAAGAAGCCGCTGAGATGGGCAAAGGGTCTTTCAAATATGCTTGGG
TGTTGGACAAACTTAAGGCCGAGCGTGAACGTGGTATCACCATCGATATCGCTTTGTGGA
AGTTTGAAACCAACAATTACTCCATCACTATTATTGATGCTCCCGGTCACAGAGATTTCA
TCAAGAACATGATCACAGGAACATCCCAGGCCGATTGTGCCGTGCTTATTGTTGCTGCTG
GTGTTGGTGAATTTGAAGCCGGTATCTCCAAGAACGGTCAAACACGAGAACACGCTCTGC
TTGCGTTCACCCTTGGGGTCAAGCAAATCATTGTAGCTGTCAACAAGATGGACAGCACGG
AGCCAAAATACTCCCAAAAGCGTTTCGAAGAAATCAGCAAGGAGGTGACGACTTATTTGA
AGAAGGTCGGTTACAACCCCAAGGCTGTTGCCTTCGTCCCAATTTCTGGTTGGCACGGTG
ACAACATGCTGGAGGAGTCCGAGAACATGTCTTGGTACAAGGGGTGGAGCCGTGAACAAG
ATAAGAAAACTTTGACTGGCAAAACCCTCTTCAATGCCTTGGACAGCATTGCCCCACCAA
AGAGACCAACAGACAAGCCTCTTCGTCTCCCACTTCAAGATGTTTACAAAATCGGAGGTA
TTGGAACTGTCCCAGTCGGACGTGTGGAAACTGGCATCTTGAAACCAGGAGTCGTTGCCA
CATTCGCTCCAGTTAATCTTTCCACTGAAGTCAAATCTGTAGAGATGCATCACGAGTCTA
TGACAGAGGCTCTTCCAGGTGACAACGTTGGTTTCAACGTAAAGAACGTCTCTGTAAAGG
ACATCAAGAGAGGTTACGTTGCTGGAGACTCAAAGAACGATCCACCAAAACAGGCTGAAA
CTTTCACAGCTCAAGTTATCATTCTGAACCACCCTGGTCAAATTCATGCTGGATATGCAC
CAGTGTTGGATTGTCACACTGCACATATTGCTTGCAAGTTCCAGGAATTGAAGGAGAAGA
TTGACAGACGTAGTGGTAAAAAACTGGAAGATGCACCAAAAGCTGTAAAATCTGGTGATG
CCGCCATCGTTGTTCTGAAGCCACAAAAACCAATGTGTGTTGAGGCATTCCAAGAATACC
CACCACTTGGTCGTTTCGCTGTCCGTGACATGAGAAACACCGTAGCTGTCGGTGTTATCA
AGAGTGTGGAGAAGAAAGAGGTCGCCGGCAAAGAGACCAAATCTGCCAAGAAAGTCGGCA
AGAAGTGACTGCAGCCAACGACACCGCCCACCATCACTTCTGCAGTTTTACTCCACCAGC
TTGCTCACCCTTCTAACCATTTCAGCCTAGTTAAACCCCCAGTTCAATTTGTCAGCCTTT
TAAATTGCGTCATGACATTTCAGTTGTTACTGTGTGCCGCTCTGTCCACATGGTGTAGTT
ATGTTTTTCATTACCCCCACCGAAAACACTTTCGTAGGAAAAAACCCTCCGTTTCGTGCC
AACTTAAAAGTGTTATTTTTGTTTCTAGCGCTGCTTAACTTATTTAAAATGACAAGACTA
TCTATGATTTTAAACCATGGCTTTGAATGGCGTACATGTATTATTGTGTTTATATTCAGT
TAAACCGTACTATTACTGCTTGGAAAATTCAGTTCATTCCTTCACCGAAGGTGCTTAACG
TGGTTGGTTGCGGTGTTGTCAATTTGCTGTTGGAAATAAAGCTTCTGTTAAGTGTA
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[3-262] 8.22E-81 |
| Hamap |
Transl_elong_EF1A_euk/arc (IPR004539) - T[3-445] 50.824 |
| TIGRFAM |
Transl_elong_EF1A_euk/arc (IPR004539) - T[4-446] 4.8E-220 |
| ProSiteProfiles |
TF_GTP-bd_dom (IPR000795) - T[6-243] 62.494 |
| Pfam |
TF_GTP-bd_dom (IPR000795) - T[6-236] 2.2E-55 |
| PRINTS |
TF_GTP-bd_dom (IPR000795) - T[10-23] 1.3E-24 - T[69-77] 1.3E-24 - T[89-99] 1.3E-24 - T[105-116] 1.3E-24 - T[149-158] 1.3E-24 |
| ProSitePatterns |
G_TR_CS (IPR031157) - T[62-77] . |
| SUPERFAMILY |
Transl_B-barrel_sf (IPR009000) - T[239-335] 4.64E-28 |
| Pfam |
EFTu-like_2 (IPR004161) - T[261-326] 1.2E-11 |
| Pfam |
Transl_elong_EFTu/EF1A_C (IPR004160) - T[335-442] 1.6E-41 |
| SUPERFAMILY |
Transl_elong_EF1A/Init_IF2_C (IPR009001) - T[339-442] 4.03E-44 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EF1A1_HUMAN | 83.406 % | 795 | 0 |
| EF1A3_HUMAN | 82.969 % | 790 | 0 |
| EF1A2_HUMAN | 82.314 % | 790 | 0 |