- Transcript 'KH2012:KH.C1.508.v4....' >
- Clone 'cien201939' >
- Transcript 'KH2012:KH.C9.169.v1....' >
- Transcript 'KH2012:KH.C5.42.v1.A...' >
- Transcript 'KH2012:KH.C14.56.v1....'
Transcript Model
Transcript Id
KH2012:KH.C14.56.v1.R.ND2-1
Possible name(s)
ADGRB2; ADGRB3; HMCN1
Gene model
Location
KhC14 [1,688,651 / 1,692,039]
Amino acid sequence
Length: 675
>KH.C14.56.v1.R.ND2-1
PIVDNGINMNIIEKKFLKLLEGNEVQERLFPLSGNDGVPTEERVHSATERCSPFPANCRI
LYASMKEMMPSVDIPYCQRIPCVTNNPNIHTNAELCLTTPGCVFDNELSRYRFTLNQAVL
PTVPVCHMAIRNRVFQRKAAEYLQKGGVWNPLLTECLINEFREEIFENSAGCKMITMLEY
FGYEPKRAGWKGISTRDCHLIDGCWRPDKGCVYPVGTDDINVRSSNDEAPTVLPNEFLFG
QPECLPFDSLNDAAFLASYHKCLSTGCATSVSGTTVTKHLYGAGNSHLPTAILKYRYYAK
LRAGEVRADNWQEIVNEILATRHNSRADALALYQSLISLQQINEALAAPINPNPLLPYSL
NTNTSSVKSALPITNGLATRSNLRTFDTNLLLMESLVNRPVPSNPMISSLKKIIPTSQQY
CPYQGFQLNTLPPLSGSFESCCERPLCYIPRSSVYQQRSGVSSYKGEWNSWTKCSKSCLG
GTQRRSRPCIGKNCVKIADEVRNCNEHQCPSWLSWGEYNTCSRSCAGGVQVRSRKCSTYG
QCLGPENQTKSCRSGACPTMSAWSQWTVCSEKCGVGIRTRNRTCTSGGAYGCPDISGEVA
RCVRYCGNIQHRDSLCDPVTCLVTRTPVCLQSDGSPGYCRRDRMQSFNIRCYSHNCFCYY
FPDRYPCNIGMRFGI
Nucleotide sequence
Length: 2,075
>KH2012:KH.C14.56.v1.R.ND2-1
CACCGATCGTCGACAATGGGATTAACATGAACATAATAGAGAAAAAGTTCCTAAAACTGT
TGGAGGGGAATGAAGTACAAGAACGACTTTTTCCACTCAGCGGAAACGATGGTGTTCCGA
CAGAAGAAAGAGTTCATTCCGCCACAGAAAGATGTTCCCCGTTCCCAGCAAACTGTCGCA
TACTGTATGCTTCAATGAAAGAAATGATGCCCTCAGTCGATATACCTTACTGCCAACGAA
TTCCATGCGTTACAAACAATCCGAACATACACACAAACGCAGAACTTTGTCTCACCACAC
CCGGATGTGTATTTGACAATGAACTTTCCCGCTACCGGTTCACGTTAAATCAAGCGGTTC
TACCAACTGTACCAGTTTGTCATATGGCAATTAGAAATCGGGTTTTCCAAAGAAAGGCGG
CTGAATATTTACAAAAGGGTGGAGTATGGAACCCACTGTTGACTGAGTGTCTGATCAACG
AATTTCGAGAAGAAATATTTGAAAACTCGGCTGGGTGTAAAATGATAACCATGCTGGAGT
ATTTTGGCTACGAACCTAAGCGAGCGGGCTGGAAAGGCATCTCAACAAGGGACTGCCATT
TGATTGACGGATGCTGGCGACCTGACAAAGGGTGCGTGTACCCTGTTGGAACAGATGACA
TAAACGTACGCTCGAGCAACGACGAAGCACCAACTGTGCTTCCGAATGAGTTTCTATTCG
GCCAACCAGAGTGTTTGCCATTTGATAGTTTAAACGATGCTGCGTTTTTGGCAAGCTACC
ACAAGTGCTTATCCACCGGTTGCGCAACCAGCGTAAGCGGGACCACTGTAACCAAGCATT
TGTATGGCGCAGGCAATTCTCACTTGCCAACCGCAATATTGAAGTATCGCTACTATGCTA
AACTTCGCGCCGGTGAGGTACGAGCAGACAACTGGCAAGAGATCGTAAACGAGATATTAG
CAACGCGTCACAATTCTAGAGCAGATGCATTAGCGCTTTACCAATCTTTAATTAGCTTAC
AACAAATCAATGAAGCATTGGCAGCTCCTATAAACCCGAATCCGCTTCTTCCATACTCTC
TTAATACAAATACATCGTCTGTTAAATCTGCATTGCCAATCACAAACGGCCTCGCTACGA
GATCAAACCTAAGGACCTTTGATACTAATCTTTTACTTATGGAGTCATTAGTAAACCGTC
CTGTCCCGAGTAACCCGATGATTTCGAGCTTAAAGAAAATTATTCCGACCTCACAACAAT
ACTGTCCATACCAGGGATTCCAGTTGAATACTTTGCCGCCGCTGTCAGGTAGCTTTGAAA
GCTGCTGTGAGAGGCCCCTTTGCTATATTCCACGCTCTTCTGTTTATCAACAAAGGTCCG
GAGTGTCTTCTTATAAAGGCGAATGGAACTCTTGGACGAAGTGCAGCAAATCGTGCTTAG
GGGGTACACAGAGACGGTCAAGGCCTTGCATTGGAAAGAATTGTGTAAAAATCGCAGACG
AAGTAAGAAATTGTAATGAACATCAGTGTCCAAGTTGGCTTTCGTGGGGCGAGTACAATA
CCTGCAGCAGATCATGCGCTGGTGGTGTACAAGTACGGTCGCGAAAATGCAGTACGTATG
GGCAATGCTTAGGCCCTGAAAATCAAACTAAATCTTGCAGATCTGGAGCGTGCCCGACTA
TGAGCGCTTGGAGTCAGTGGACTGTATGCAGTGAGAAATGCGGGGTCGGGATTCGAACCC
GGAACCGTACGTGCACTTCAGGTGGTGCTTACGGGTGTCCAGACATTTCAGGCGAAGTTG
CACGCTGCGTAAGATACTGTGGGAATATACAGCATAGAGACAGTCTGTGTGATCCTGTAA
CTTGTCTTGTGACTCGAACACCTGTATGCTTACAAAGCGACGGTTCTCCGGGTTACTGTA
GACGTGATAGAATGCAGTCGTTTAACATTCGCTGTTACAGTCACAATTGTTTTTGCTATT
ATTTTCCGGACAGATACCCGTGTAATATAGGGATGAGATTTGGTATTTAAGAGTGTATGA
CTTTGCGTTTTTTTAAACAAATACAATTACTTTTG
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[462-510] 11.611 - T[512-556] 8.912 - T[557-607] 10.287 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[463-505] 6.54E-8 - T[509-552] 1.57E-6 - T[557-602] 1.7E-7 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[463-510] 8.9E-10 - T[511-558] 2.0E-6 - T[559-607] 1.1E-7 |
| SMART |
TSP1_rpt (IPR000884) - T[465-510] 3.5E-9 - T[512-558] 4.1E-6 - T[560-607] 2.2E-5 |
| Pfam |
TSP1_rpt (IPR000884) - T[466-509] 4.3E-5 - T[515-557] 4.7E-5 - T[561-601] 7.9E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 36.709 % | 91.3 | 1.04E-18 |
| AGRB2_HUMAN | 32.524 % | 99.8 | 2.02E-21 |
| AGRB3_HUMAN | 33.766 % | 81.6 | 6.65E-16 |