- Transcript 'KH2012:KH.L112.26.v1...' >
- EST 'FF783534.1' >
- Transcript 'KH2012:KH.C14.567.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.567.v1.R.ND1-1
Possible name(s)
ADGRB2; HMCN1; THBS2
Gene model
Location
KhC14 [1,682,620 / 1,687,845]
Amino acid sequence
Length: 721
>KH.C14.567.v1.R.ND1-1
TVMDKMLYILLLLTVIVVEVAGQQRVVTRECIIKQQVLARTGFCNRGRRRGDTLPCRDFC
SGQIIEGRVACIRARHCCRRRGVCILKQPENFNENAPSIDFHDAELQFNRSFIRTITDRS
PEPSSSRPQQDTRNYAISSSTSFCLTYPNNCIFRPLSMIPRVNIPYCQRIPCSRADFTLD
HNYIGCITTPGCQFDYTLYRYRGVLNQAVLPGVPVCYLAVRNTAYLRRVQEHVSVYGSWN
PLMEDCLLNQYRDEIFGPNQPGCHMVDVLEYYGDAPKLAGWKGITSAECFLIGACWKSDG
KCVYPLQIEQVALNTSTQNLPTGVPSITYYGQPKCQEFNETAASEEFLSQHHKCLKAGCT
SSVDHNLILQHLYTVMTQNLPVDLQYQFWVMAQLGQVRADNWKQSLAGIVNGATNSAGTF
GVIPFRLNVGTLRGNSSTTPRVNFGVIGSGLPGYDLSIPNRPCHYQNVVWPGLPPLNGSF
EGCCDRERCFTPRFALYTQQFSGVASYLDEWSVWSTCSKTCDGGSQSRKRHCVGKTCAMG
PSETRSCGTQPCPVWLPWSQFLPCSKSCGGGVMRRIRLCRSGNCTGLNEQTQSCRTGECP
SFGTWSTWTPCSAQCATGFRFRNRTCLAGGEYGCPPITTEAALCHDYCGTISYTDTPCNA
TTCYATRTFSCLKEDGSPGFCRPNLLIPKEVRCYINNCYCLHFPDQISCVFRSTSLRELE
N
Nucleotide sequence
Length: 2,549
>KH2012:KH.C14.567.v1.R.ND1-1
GTATATAACCCTGGCGTTTATGAATGTAATAGCTAAACTGTAGCTGGAAGTTTAAAAGGC
CAAGCATAAGTTGAACGTGTCAGTTTAGACCAGGTTAGACTGTAATGGACAAGATGCTTT
ACATACTGTTGTTGCTGACTGTTATTGTTGTTGAGGTGGCTGGGCAGCAACGTGTTGTTA
CGAGGGAATGTATTATTAAACAACAAGTTTTAGCGCGGACAGGATTTTGCAATCGTGGAA
GACGACGAGGAGATACGTTGCCTTGTCGAGACTTTTGCTCTGGTCAGATTATCGAGGGAA
GAGTTGCATGTATCAGAGCACGCCATTGCTGTAGAAGACGAGGTGTTTGTATACTAAAGC
AACCTGAAAATTTTAACGAAAATGCGCCTTCAATCGATTTTCACGATGCGGAACTTCAAT
TTAATCGTTCGTTTATTCGCACAATCACTGACCGTTCACCAGAACCCTCATCAAGCCGCC
CACAGCAAGACACACGAAATTATGCAATAAGTTCTTCGACGTCATTCTGCCTTACCTACC
CAAACAACTGTATTTTTAGACCATTAAGTATGATACCAAGGGTCAATATTCCTTATTGTC
AAAGAATACCATGCTCTCGAGCTGATTTTACACTTGACCACAACTACATTGGTTGCATAA
CAACTCCCGGCTGTCAGTTCGATTACACGCTTTATCGTTACCGCGGTGTTTTGAATCAAG
CAGTGTTACCTGGTGTACCGGTATGCTACTTGGCGGTTCGTAACACCGCGTACCTACGAC
GAGTCCAAGAGCATGTATCAGTGTACGGCTCCTGGAATCCACTTATGGAAGATTGCTTGC
TTAACCAATACAGGGATGAGATATTTGGACCGAATCAGCCGGGTTGTCATATGGTTGATG
TATTGGAGTATTATGGTGATGCACCAAAATTAGCTGGCTGGAAAGGAATAACTTCGGCCG
AGTGTTTTCTGATTGGAGCATGCTGGAAATCGGACGGTAAATGTGTATACCCTCTTCAAA
TTGAACAAGTGGCATTGAATACCAGCACACAAAACTTGCCTACAGGTGTTCCAAGTATAA
CATATTATGGCCAGCCTAAGTGCCAGGAATTTAATGAAACCGCTGCAAGCGAGGAGTTTT
TGTCACAACACCATAAGTGCTTAAAGGCAGGCTGTACAAGCTCGGTAGACCACAATCTTA
TATTACAACACTTGTACACTGTTATGACGCAGAACCTGCCTGTTGACTTGCAATACCAGT
TTTGGGTGATGGCACAATTAGGGCAGGTTAGAGCGGATAATTGGAAACAGTCGTTGGCTG
GTATTGTGAACGGTGCTACTAACAGCGCTGGCACATTTGGAGTGATCCCATTTCGCCTCA
ATGTGGGCACACTTCGCGGAAACAGCTCAACTACTCCTAGAGTTAACTTTGGGGTCATCG
GAAGCGGTTTGCCTGGGTATGACTTAAGCATTCCTAACCGTCCGTGTCACTATCAGAATG
TTGTTTGGCCCGGTCTACCGCCTTTGAACGGCAGTTTTGAAGGCTGTTGCGACCGCGAAC
GATGTTTTACGCCGCGCTTTGCGTTGTATACCCAACAGTTTTCGGGCGTCGCTTCTTACC
TGGACGAGTGGTCGGTCTGGTCAACCTGTTCTAAAACTTGCGACGGTGGAAGCCAATCTA
GAAAGCGGCATTGTGTGGGGAAAACCTGTGCGATGGGACCAAGTGAAACCAGAAGTTGTG
GAACACAGCCATGCCCTGTATGGCTCCCTTGGAGTCAGTTTTTGCCGTGTAGCAAATCTT
GCGGCGGTGGGGTTATGCGGCGGATACGTTTATGCCGCAGTGGAAACTGTACTGGTTTAA
ATGAGCAAACCCAGTCTTGCAGAACAGGCGAATGTCCGAGTTTTGGAACGTGGAGCACCT
GGACTCCGTGTAGCGCTCAGTGTGCGACTGGATTTAGATTTCGAAATCGTACTTGTTTAG
CGGGCGGGGAATATGGCTGTCCACCTATCACCACAGAGGCAGCTTTATGCCATGATTACT
GCGGTACGATCTCGTACACGGATACTCCATGCAACGCTACAACTTGTTACGCCACGCGAA
CTTTTAGTTGCTTGAAAGAAGATGGCAGCCCTGGTTTCTGCCGGCCAAATTTATTGATAC
CAAAAGAAGTTCGTTGTTATATTAACAACTGTTACTGCTTACATTTCCCTGATCAGATCA
GCTGCGTTTTTCGCTCGACCAGTTTACGAGAGTTGGAAAATTAACATTATTTTACATTCT
TAATAGCTGTTTTTTTGCCTTTTATTGCTTTTTGATCATTTACTACACCGCATTGTACTT
TTGACTTAGTTTTTGTCAGTTTTAAATCTTTTCTCATGCTGATTGTTAAGTGACTATATA
CTGCAACTAACCGTGCTACTAGTATTCCAACGAAAGTTCCAGGTAAAAACAAAGTCCCGA
TATCTGTACGACAATCGGCACTTTTATTTTTAAAAATGGTTGTCTTAAATATTCTTTAAG
CATATTAAACAACACCTTTTTTCGTTTTA
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[505-553] 12.309 - T[555-600] 10.797 - T[602-649] 8.6 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[507-552] 2.22E-9 - T[551-595] 7.19E-8 - T[599-644] 3.92E-8 |
| SMART |
TSP1_rpt (IPR000884) - T[508-553] 4.3E-10 - T[555-600] 1.9E-8 - T[602-649] 1.7E-5 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[508-553] 1.8E-9 - T[554-600] 4.8E-9 - T[601-644] 1.1E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[510-552] 3.9E-6 - T[557-599] 2.0E-6 - T[604-644] 3.0E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 36.25 % | 96.3 | 3.02E-20 |
| AGRB2_HUMAN | 38.926 % | 95.5 | 4.3E-20 |
| TSP2_HUMAN | 39.259 % | 87 | 1.54E-17 |