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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S54...'
  2. Clone 'cign057d05'
  3. Transcript 'KH2012:KH.C14.57.v1....'

Transcript Model

Transcript Id

KH2012:KH.C14.57.v1.A.nonSL20-1

Possible name(s)

AC079594.2; TRIM13; TRIM59

Location

KhC14 [542,080 / 544,957]

Sequences

Amino acid sequence

Length: 323

>KH.C14.57.v1.A.nonSL20-1
CKVHVNRMAGAKSLKNKLEDDLLTCPICCSLYNDPRVLKCQHSFCHGCLKGSMKAAKSNG
KSINCAVCRKPTPLAKKGLADLPKNYVIIGLSQMVKEHKESGKSPVVAKSSSGKNVGNVK
QLVETFNKKSIVEKPSKKRDKNFNIEVPKAGVVHDDENDDSSDLSTSASDSSGMTEFTPT
DDSESTSSGSDDSSSGSDDSDTDSESDSGSSDDEEPEHVPQRPTIKSSHGIKLGMKVFVF
TAKGKPLPGTVRVLEKYKRKPPNQTQVYAGVQMEKEYKKLTTEDILDMDDSYLFNWLMDF
DQPCVAVRIDQCCPAKVIQRFNL

Nucleotide sequence

Length: 1,089

>KH2012:KH.C14.57.v1.A.nonSL20-1
GGTAACGTTTGTGCTGCTGTGGTTGAACAGTAGTTAGTGTAAGGTACATGTGAACAGGAT
GGCTGGTGCAAAATCGCTTAAGAATAAGTTGGAGGACGATTTGCTGACTTGTCCGATTTG
CTGCTCGTTGTACAATGATCCAAGAGTGTTGAAATGTCAGCATTCGTTTTGCCATGGTTG
CTTGAAAGGTTCCATGAAAGCAGCAAAATCTAATGGCAAGTCAATCAACTGTGCCGTGTG
CAGAAAGCCAACACCACTGGCAAAAAAAGGTCTTGCGGATTTGCCCAAGAATTACGTCAT
CATCGGGTTATCGCAAATGGTCAAGGAACACAAGGAGAGCGGAAAGTCGCCCGTGGTCGC
AAAATCATCTTCCGGAAAGAATGTTGGTAATGTTAAACAATTGGTCGAAACGTTCAACAA
AAAATCAATCGTTGAAAAACCATCAAAAAAGAGAGATAAGAACTTCAACATAGAAGTACC
AAAAGCTGGTGTTGTCCATGATGATGAAAATGACGACAGTTCGGATTTGTCTACAAGTGC
TTCGGACTCGTCTGGGATGACAGAATTCACTCCAACCGATGACAGCGAGTCTACAAGCAG
TGGAAGCGATGATAGTAGCAGTGGAAGCGATGATAGCGATACCGATAGCGAGAGTGATAG
TGGAAGTAGCGACGACGAAGAACCCGAACATGTTCCACAAAGGCCTACAATAAAAAGCTC
TCATGGTATCAAACTTGGTATGAAGGTGTTTGTTTTCACTGCCAAAGGTAAACCACTCCC
AGGGACCGTAAGGGTACTCGAGAAATATAAACGCAAGCCACCAAACCAAACGCAAGTGTA
TGCGGGCGTGCAAATGGAGAAGGAATACAAAAAGTTAACAACAGAAGATATTTTGGACAT
GGACGATTCTTATCTCTTCAATTGGTTGATGGACTTCGATCAACCATGTGTGGCTGTGAG
AATAGACCAATGTTGCCCTGCTAAAGTTATTCAAAGATTTAATCTATGATCCGCCAAGCC
TTTGTCACCGACCAGTTCACGAAGTTACCTGCTTTTTTGTTTTTCTTTATTTAAATAAAC
TATTTGTAT

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[13-105] 2.3E-17
Pfam
Znf-RING_LisH (IPR027370) - T[25-65] 7.5E-8
ProSiteProfiles
Znf_RING (IPR001841) - T[25-69] 11.309
SMART
Znf_RING (IPR001841) - T[25-68] 2.9E-7
ProSitePatterns
Znf_RING_CS (IPR017907) - T[40-49] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value