Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C14.57.v1.A.nonSL24-1

Possible name(s)

AC079594.2; TRIM13; TRIM59

Gene model

KH2012:KH.C14.57

Location

KhC14 [542,080 / 544,882]

Sequences

Amino acid sequence

Length: 310

>KH.C14.57.v1.A.nonSL24-1
LKNKLEDDLLTCPICCSLYNDPRVLKCQHSFCHGCLKGSMKAAKSNGKSINCAVCRKPTP
LAKKGLADLPKNYVIIGLSQMVKEHKESGKSPVVAKSSSGKNVGNVKQLVETFNKKSIVE
KPSKKRDKNFNIEVPKAGVVHDDENDDSSDLSTSASDSSGMTEFTPTDDSESTSSGSDDS
SSGSDDSDTDSESDSGSSDDEEPEHVPQRPTIKSSHGIKLGMKVFVFTAKGKPLPGTVRV
LEKYKRKPPNQTQVYAGVQMEKEYKKLTTEDILDMDDSYLFNWLMDFDQPCVAVRIDQCC
PAKVIQRFNL

Nucleotide sequence

Length: 1,014

>KH2012:KH.C14.57.v1.A.nonSL24-1
GCTTAAGAATAAGTTGGAGGACGATTTGCTGACTTGTCCGATTTGCTGCTCGTTGTACAA
TGATCCAAGAGTGTTGAAATGTCAGCATTCGTTTTGCCATGGTTGCTTGAAAGGTTCCAT
GAAAGCAGCAAAATCTAATGGCAAGTCAATCAACTGTGCCGTGTGCAGAAAGCCAACACC
ACTGGCAAAAAAAGGTCTTGCGGATTTGCCCAAGAATTACGTCATCATCGGGTTATCGCA
AATGGTCAAGGAACACAAGGAGAGCGGAAAGTCGCCCGTGGTCGCAAAATCATCTTCCGG
AAAGAATGTTGGTAATGTTAAACAATTGGTCGAAACGTTCAACAAAAAATCAATCGTTGA
AAAACCATCAAAAAAGAGAGATAAGAACTTCAACATAGAAGTACCAAAAGCTGGTGTTGT
CCATGATGATGAAAATGACGACAGTTCGGATTTGTCTACAAGTGCTTCGGACTCGTCTGG
GATGACAGAATTCACTCCAACCGATGACAGCGAGTCTACAAGCAGTGGAAGCGATGATAG
TAGCAGTGGAAGCGATGATAGCGATACCGATAGCGAGAGTGATAGTGGAAGTAGCGACGA
CGAAGAACCCGAACATGTTCCACAAAGGCCTACAATAAAAAGCTCTCATGGTATCAAACT
TGGTATGAAGGTGTTTGTTTTCACTGCCAAAGGTAAACCACTCCCAGGGACCGTAAGGGT
ACTCGAGAAATATAAACGCAAGCCACCAAACCAAACGCAAGTGTATGCGGGCGTGCAAAT
GGAGAAGGAATACAAAAAGTTAACAACAGAAGATATTTTGGACATGGACGATTCTTATCT
CTTCAATTGGTTGATGGACTTCGATCAACCATGTGTGGCTGTGAGAATAGACCAATGTTG
CCCTGCTAAAGTTATTCAAAGATTTAATCTATGATCCGCCAAGCCTTTGTCACCGACCAG
TTCACGAAGTTACCTGCTTTTTTGTTTTTCTTTATTTAAATAAACTATTTGTAT

InterProScan

Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[2-92] 2.6E-17
Pfam	Znf-RING_LisH (IPR027370) - T[12-52] 7.1E-8
ProSiteProfiles	Znf_RING (IPR001841) - T[12-56] 11.309
SMART	Znf_RING (IPR001841) - T[12-55] 2.9E-7
ProSitePatterns	Znf_RING_CS (IPR017907) - T[27-36] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value