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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C11.129.v1...'
  2. Transcript 'Phfumi.CG.MTP2014.S7...'
  3. Clone 'cicl089m16'
  4. Clone 'cien46510'
  5. Transcript 'KH2012:KH.C14.57.v1....'

Transcript Model

Transcript Id

KH2012:KH.C14.57.v1.R.ND1-1

Possible name(s)

AC079594.2; TRIM13; TRIM59

Location

KhC14 [542,080 / 544,942]

Sequences

Amino acid sequence

Length: 323

>KH.C14.57.v1.R.ND1-1
CKVHVNRMAGAKSLKNKLEDDLLTCPICCSLYNDPRVLKCQHSFCHGCLKGSMKAAKSNG
KSINCAVCRKPTPLAKKGLADLPKNYVIIGLSQMVKEHKESGKSPVVAKSSSGKNVGNVK
QLVETFNKKSIVEKPSKKRDKNFNIEVPKAGVVHDDENDDSSDLSTSASDSSGMTEFTPT
DDSESTSSGSDDSSSGSDDSDTDSESDSGSSDDEEPEHVPQRPTIKSSHGIKLGMKVFVF
TAKGKPLPGTVRVLEKYKRKPPNQTQVYAGVQMEKEYKKLTTEDILDMDDSYLFNWLMDF
DQPCVAVRIDQCCPAKVIQRFNL

Nucleotide sequence

Length: 1,074

>KH2012:KH.C14.57.v1.R.ND1-1
GCTGTGGTTGAACAGTAGTTAGTGTAAGGTACATGTGAACAGGATGGCTGGTGCAAAATC
GCTTAAGAATAAGTTGGAGGACGATTTGCTGACTTGTCCGATTTGCTGCTCGTTGTACAA
TGATCCAAGAGTGTTGAAATGTCAGCATTCGTTTTGCCATGGTTGCTTGAAAGGTTCCAT
GAAAGCAGCAAAATCTAATGGCAAGTCAATCAACTGTGCCGTGTGCAGAAAGCCAACACC
ACTGGCAAAAAAAGGTCTTGCGGATTTGCCCAAGAATTACGTCATCATCGGGTTATCGCA
AATGGTCAAGGAACACAAGGAGAGCGGAAAGTCGCCCGTGGTCGCAAAATCATCTTCCGG
AAAGAATGTTGGTAATGTTAAACAATTGGTCGAAACGTTCAACAAAAAATCAATCGTTGA
AAAACCATCAAAAAAGAGAGATAAGAACTTCAACATAGAAGTACCAAAAGCTGGTGTTGT
CCATGATGATGAAAATGACGACAGTTCGGATTTGTCTACAAGTGCTTCGGACTCGTCTGG
GATGACAGAATTCACTCCAACCGATGACAGCGAGTCTACAAGCAGTGGAAGCGATGATAG
TAGCAGTGGAAGCGATGATAGCGATACCGATAGCGAGAGTGATAGTGGAAGTAGCGACGA
CGAAGAACCCGAACATGTTCCACAAAGGCCTACAATAAAAAGCTCTCATGGTATCAAACT
TGGTATGAAGGTGTTTGTTTTCACTGCCAAAGGTAAACCACTCCCAGGGACCGTAAGGGT
ACTCGAGAAATATAAACGCAAGCCACCAAACCAAACGCAAGTGTATGCGGGCGTGCAAAT
GGAGAAGGAATACAAAAAGTTAACAACAGAAGATATTTTGGACATGGACGATTCTTATCT
CTTCAATTGGTTGATGGACTTCGATCAACCATGTGTGGCTGTGAGAATAGACCAATGTTG
CCCTGCTAAAGTTATTCAAAGATTTAATCTATGATCCGCCAAGCCTTTGTCACCGACCAG
TTCACGAAGTTACCTGCTTTTTTGTTTTTCTTTATTTAAATAAACTATTTGTAT

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[13-105] 2.3E-17
Pfam
Znf-RING_LisH (IPR027370) - T[25-65] 7.5E-8
ProSiteProfiles
Znf_RING (IPR001841) - T[25-69] 11.309
SMART
Znf_RING (IPR001841) - T[25-68] 2.9E-7
ProSitePatterns
Znf_RING_CS (IPR017907) - T[40-49] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value