- Transcript 'KH2012:KH.C12.696.v1...' >
- Transcript 'KH2012:KH.C1.459.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.459.v1.A.SL2-1
Possible name(s)
SNX18; SNX33; SNX9
Gene model
Location
KhC1 [6,327,224 / 6,336,456]
Amino acid sequence
Length: 576
>KH.C1.459.v1.A.SL2-1
NLELQRFYKGERNQYHQVLTQTNRTFVFDMDVVVTLYEFEGDVNNGELCFGPGERITVTN
KDVGEGWWEGQKDDGTSGLFPETYVEAPHSDPTLDPSDPFGLPPPAPSESWEEPQVAVEA
SAPVEQSTNNDWADDWTNQAPQQQQQNVSPTHSQRSQGSIVNSAGLGSPVKRTDRKTTVK
LGNFISSLTKTAVESFVLGETNLEVPASSMVQVISGLDGPMWENNPHPFTCTVTNPVKES
KFSGLKSFIAYTITPSHTDVAVLRRFKHFDWLYEQLVRKYGVSISVPQLPDKQITGRYED
DFIEGRRVQLQTWLCRIALHPVISCSDVFGHFVTSKDDEKAWKQGKRKAEKDEAVGGGFF
QAINTPDQKMDFTIAEQTLDTHSKFTRGMDEACKQLIIVGQDQAKKFPQVYKKDTQRLGQ
LFSTLGECFELDNRPVSAPLTEAIKHTGQVYEAVGELYGNQPTYDWNPLLEGLNEYHGVL
ATFPAILGNQRNALDKLKEVRRLQLENKVTVDEMEDVATRTEKISYAVEAEVNHFQHYRV
GDFVGYMKDFVQQQISFHQEIVKKLQDTAVLYEELM
Nucleotide sequence
Length: 2,806
>KH2012:KH.C1.459.v1.A.SL2-1
ATGACTTTTAAACAGATTTTGCATGGTGTTAGCTCTTCTCTTTCTGCTTAAAATTTGGAG
TTACAAAGATTTTACAAAGGTGAGAGAAACCAATACCATCAAGTGCTAACACAGACCAAC
AGAACTTTTGTCTTTGACATGGACGTTGTAGTTACTTTGTATGAGTTCGAGGGAGATGTA
AATAATGGAGAACTATGTTTTGGACCAGGAGAACGAATTACTGTCACAAATAAGGATGTG
GGTGAAGGGTGGTGGGAAGGCCAAAAAGATGACGGGACTTCAGGATTGTTTCCAGAGACT
TATGTCGAGGCACCACATTCTGACCCCACTTTAGACCCATCCGATCCATTTGGGTTACCA
CCACCTGCTCCATCTGAGAGCTGGGAAGAGCCACAAGTTGCGGTAGAAGCTTCTGCTCCA
GTCGAACAAAGCACAAACAATGATTGGGCCGATGATTGGACCAACCAAGCACCACAGCAA
CAGCAACAAAATGTGTCACCCACCCACTCACAGAGGTCGCAGGGATCTATTGTTAATTCA
GCGGGGTTAGGCTCCCCTGTTAAAAGAACTGACAGGAAAACAACTGTCAAACTTGGAAAT
TTCATATCCTCCCTTACAAAGACAGCGGTTGAGTCATTTGTTTTGGGCGAAACCAACCTG
GAAGTTCCTGCATCTTCGATGGTACAAGTTATTTCTGGATTAGATGGACCAATGTGGGAA
AATAATCCCCACCCATTCACATGCACAGTCACCAACCCAGTGAAGGAAAGCAAGTTTTCC
GGCTTAAAAAGTTTTATAGCTTACACCATAACACCATCACACACAGACGTTGCAGTGCTA
CGTAGATTCAAACACTTTGATTGGCTTTATGAGCAACTAGTTAGAAAGTATGGAGTGTCT
ATATCAGTTCCACAACTGCCGGACAAGCAAATAACAGGGAGATATGAAGATGATTTTATT
GAAGGAAGAAGGGTCCAGCTGCAAACATGGTTGTGTAGGATCGCACTTCATCCTGTCATA
TCTTGTTCAGATGTGTTCGGTCACTTTGTAACATCCAAAGATGATGAAAAAGCATGGAAG
CAAGGCAAACGTAAAGCTGAGAAAGATGAAGCAGTTGGTGGAGGATTCTTCCAAGCCATC
AATACTCCCGATCAAAAGATGGATTTCACAATCGCAGAACAGACATTGGACACACACAGT
AAATTCACCCGTGGTATGGATGAAGCTTGCAAACAACTTATTATAGTTGGGCAAGACCAA
GCTAAGAAGTTTCCCCAGGTGTACAAGAAAGACACCCAAAGACTTGGTCAACTTTTCTCA
ACACTTGGTGAATGCTTCGAGCTTGACAACAGGCCAGTGTCTGCCCCACTGACCGAGGCA
ATTAAACATACGGGTCAAGTATATGAAGCTGTTGGTGAATTATATGGTAATCAACCTACG
TATGATTGGAATCCATTACTTGAGGGATTGAATGAATATCACGGAGTGTTGGCCACATTT
CCTGCCATACTTGGAAACCAAAGGAATGCATTGGATAAATTAAAAGAAGTCCGGAGGTTG
CAACTTGAGAACAAAGTGACGGTTGATGAGATGGAAGATGTTGCTACGAGGACTGAGAAG
ATCAGTTACGCTGTAGAAGCTGAGGTGAACCACTTCCAGCACTACAGAGTTGGGGATTTT
GTCGGGTATATGAAGGATTTTGTGCAGCAGCAAATATCATTTCACCAAGAGATTGTCAAA
AAGCTTCAAGACACAGCTGTGTTATACGAAGAGTTAATGTAGTAATTCACATGACCTTTA
CATGGCCTACATGCCTGCCATTGCAAATTAGACTATCCTGCATCACCGCAAAGCAGTCTA
TGACATCTAACACCGTGTTTTAAACCTTGTTTGATTCTCTACTTTGTAGAACATTCATTA
TAATGTCATAATGCAGTGCAAAGCTTTTAAATTTTTCTTCCATTAAAGTAACAAACAATT
TTTAATTTTTTCATTGAACATTTGATTACAGTGTTACTTAATGTAAAATAGAATCCTTAA
TTTTTCTTCCATTAAAGTAACAAACAATTTTTAATTTTTTCATTGAAATTTTGATTACAG
TGTTACTTAATGTAAAATAGAATCCTTCCTATCACATATTGTAAGTTTGTGATTTCTTCA
AATGCTTTGATGCCATTATTCATGAGAATGCAATTTTGCTGTTCAAAACCAAAAAAAACG
AACATCTGATTTTTTTGTTTGTTGTTTTTGTCCCGTACTTCATTGAATAACTTTCTAAAT
GACCTAATGTTATGCATTTGATCACATGCTACGTCCCCCATTTTTGTCAAGTTCCGGTTT
GCAGCTTTGTTTTTATATGAGATTTTAACTGTTAACAAAGTGATTGACGTCCATTCAATT
TGAAATGATGCCTCAGTCGACTATCTTTGCGCAGTCTTCTTTATTTCATTGCATGCTCAA
CACTGCAGATCTAGGTCATATGTCACCACAAACGTAAAGTCCCTGATTCGATTTCAAATC
CGAATTTCCAAATTACGTCATTTTTATTTCTAGTGACTTTCTCATCTGATTCTTTCAAAA
CTTAGTCATCTGATTCTTTCAAAATACTGACCAATCGATTTTAAATACCTTTTTTCTCAC
CTCTGCAGCCAGTCTTTAAATCTGTAATGAGTGACCGCAGTTTTATAAATGAATGCGAGC
TACTAACTCAAAATTATTTTGCTTGCCCACATATAAGCTTATGACGTGCAATATACATAT
TATATAACGCTTGTTGAACTATCTAATTAAAATATATCGATCTTTG
| ProSiteProfiles |
SH3_domain (IPR001452) - T[28-90] 14.236 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[30-108] 5.29E-16 |
| PRINTS |
SH3_domain (IPR001452) - T[31-41] 3.4E-5 - T[46-61] 3.4E-5 - T[64-73] 3.4E-5 - T[76-88] 3.4E-5 |
| SMART |
SH3_domain (IPR001452) - T[31-89] 3.3E-14 |
| Pfam |
SH3_domain (IPR001452) - T[36-86] 6.4E-10 |
| Gene3D |
PX_dom_sf (IPR036871) - T[207-343] 3.0E-39 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[224-337] 7.59E-26 |
| SMART |
Phox (IPR001683) - T[226-336] 3.7E-18 |
| ProSiteProfiles |
Phox (IPR001683) - T[229-339] 16.589 |
| Pfam |
Phox (IPR001683) - T[232-335] 5.4E-17 |
| Pfam |
Sorting_nexin_WASP-bd-dom (IPR019497) - T[338-572] 7.4E-69 |
| SUPERFAMILY |
AH/BAR_dom_sf (IPR027267) - T[371-567] 7.12E-5 |
| Gene3D |
AH/BAR_dom_sf (IPR027267) - T[385-575] 1.4E-65 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX33_HUMAN | 33.16 % | 351 | 2.49E-114 |
| SNX9_HUMAN | 33.788 % | 317 | 8.86E-101 |
| SNX18_HUMAN | 45.794 % | 284 | 8.89E-88 |