- Transcript 'KH2012:KH.C1.459.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.459.v2.A.SL2-1
Possible name(s)
SNX18; SNX33; SNX9
Gene model
Location
KhC1 [6,327,224 / 6,336,456]
Amino acid sequence
Length: 592
>KH.C1.459.v2.A.SL2-1
NLELQRFYKGERNQYHQVLTQTNRTFVFDMDVVVTLYEFEGDVNNGELCFGPGERITVTN
KDVGEGWWEGQKDDGTSGLFPETYVEPANSNEATNSYYPPEQAPHSDPTLDPSDPFGLPP
PAPSESWEEPQVAVEASAPVEQSTNNDWADDWTNQAPQQQQQNVSPTHSQRSQGSIVNSA
GLGSPVKRTDRKTTVKLGNFISSLTKTAVESFVLGETNLEVPASSMVQVISGLDGPMWEN
NPHPFTCTVTNPVKESKFSGLKSFIAYTITPSHTDVAVLRRFKHFDWLYEQLVRKYGVSI
SVPQLPDKQITGRYEDDFIEGRRVQLQTWLCRIALHPVISCSDVFGHFVTSKDDEKAWKQ
GKRKAEKDEAVGGGFFQAINTPDQKMDFTIAEQTLDTHSKFTRGMDEACKQLIIVGQDQA
KKFPQVYKKDTQRLGQLFSTLGECFELDNRPVSAPLTEAIKHTGQVYEAVGELYGNQPTY
DWNPLLEGLNEYHGVLATFPAILGNQRNALDKLKEVRRLQLENKVTVDEMEDVATRTEKI
SYAVEAEVNHFQHYRVGDFVGYMKDFVQQQISFHQEIVKKLQDTAVLYEELM
Nucleotide sequence
Length: 2,854
>KH2012:KH.C1.459.v2.A.SL2-1
ATGACTTTTAAACAGATTTTGCATGGTGTTAGCTCTTCTCTTTCTGCTTAAAATTTGGAG
TTACAAAGATTTTACAAAGGTGAGAGAAACCAATACCATCAAGTGCTAACACAGACCAAC
AGAACTTTTGTCTTTGACATGGACGTTGTAGTTACTTTGTATGAGTTCGAGGGAGATGTA
AATAATGGAGAACTATGTTTTGGACCAGGAGAACGAATTACTGTCACAAATAAGGATGTG
GGTGAAGGGTGGTGGGAAGGCCAAAAAGATGACGGGACTTCAGGATTGTTTCCAGAGACT
TATGTCGAGCCGGCCAACAGCAATGAAGCTACAAATAGTTACTATCCCCCTGAACAAGCA
CCACATTCTGACCCCACTTTAGACCCATCCGATCCATTTGGGTTACCACCACCTGCTCCA
TCTGAGAGCTGGGAAGAGCCACAAGTTGCGGTAGAAGCTTCTGCTCCAGTCGAACAAAGC
ACAAACAATGATTGGGCCGATGATTGGACCAACCAAGCACCACAGCAACAGCAACAAAAT
GTGTCACCCACCCACTCACAGAGGTCGCAGGGATCTATTGTTAATTCAGCGGGGTTAGGC
TCCCCTGTTAAAAGAACTGACAGGAAAACAACTGTCAAACTTGGAAATTTCATATCCTCC
CTTACAAAGACAGCGGTTGAGTCATTTGTTTTGGGCGAAACCAACCTGGAAGTTCCTGCA
TCTTCGATGGTACAAGTTATTTCTGGATTAGATGGACCAATGTGGGAAAATAATCCCCAC
CCATTCACATGCACAGTCACCAACCCAGTGAAGGAAAGCAAGTTTTCCGGCTTAAAAAGT
TTTATAGCTTACACCATAACACCATCACACACAGACGTTGCAGTGCTACGTAGATTCAAA
CACTTTGATTGGCTTTATGAGCAACTAGTTAGAAAGTATGGAGTGTCTATATCAGTTCCA
CAACTGCCGGACAAGCAAATAACAGGGAGATATGAAGATGATTTTATTGAAGGAAGAAGG
GTCCAGCTGCAAACATGGTTGTGTAGGATCGCACTTCATCCTGTCATATCTTGTTCAGAT
GTGTTCGGTCACTTTGTAACATCCAAAGATGATGAAAAAGCATGGAAGCAAGGCAAACGT
AAAGCTGAGAAAGATGAAGCAGTTGGTGGAGGATTCTTCCAAGCCATCAATACTCCCGAT
CAAAAGATGGATTTCACAATCGCAGAACAGACATTGGACACACACAGTAAATTCACCCGT
GGTATGGATGAAGCTTGCAAACAACTTATTATAGTTGGGCAAGACCAAGCTAAGAAGTTT
CCCCAGGTGTACAAGAAAGACACCCAAAGACTTGGTCAACTTTTCTCAACACTTGGTGAA
TGCTTCGAGCTTGACAACAGGCCAGTGTCTGCCCCACTGACCGAGGCAATTAAACATACG
GGTCAAGTATATGAAGCTGTTGGTGAATTATATGGTAATCAACCTACGTATGATTGGAAT
CCATTACTTGAGGGATTGAATGAATATCACGGAGTGTTGGCCACATTTCCTGCCATACTT
GGAAACCAAAGGAATGCATTGGATAAATTAAAAGAAGTCCGGAGGTTGCAACTTGAGAAC
AAAGTGACGGTTGATGAGATGGAAGATGTTGCTACGAGGACTGAGAAGATCAGTTACGCT
GTAGAAGCTGAGGTGAACCACTTCCAGCACTACAGAGTTGGGGATTTTGTCGGGTATATG
AAGGATTTTGTGCAGCAGCAAATATCATTTCACCAAGAGATTGTCAAAAAGCTTCAAGAC
ACAGCTGTGTTATACGAAGAGTTAATGTAGTAATTCACATGACCTTTACATGGCCTACAT
GCCTGCCATTGCAAATTAGACTATCCTGCATCACCGCAAAGCAGTCTATGACATCTAACA
CCGTGTTTTAAACCTTGTTTGATTCTCTACTTTGTAGAACATTCATTATAATGTCATAAT
GCAGTGCAAAGCTTTTAAATTTTTCTTCCATTAAAGTAACAAACAATTTTTAATTTTTTC
ATTGAACATTTGATTACAGTGTTACTTAATGTAAAATAGAATCCTTAATTTTTCTTCCAT
TAAAGTAACAAACAATTTTTAATTTTTTCATTGAAATTTTGATTACAGTGTTACTTAATG
TAAAATAGAATCCTTCCTATCACATATTGTAAGTTTGTGATTTCTTCAAATGCTTTGATG
CCATTATTCATGAGAATGCAATTTTGCTGTTCAAAACCAAAAAAAACGAACATCTGATTT
TTTTGTTTGTTGTTTTTGTCCCGTACTTCATTGAATAACTTTCTAAATGACCTAATGTTA
TGCATTTGATCACATGCTACGTCCCCCATTTTTGTCAAGTTCCGGTTTGCAGCTTTGTTT
TTATATGAGATTTTAACTGTTAACAAAGTGATTGACGTCCATTCAATTTGAAATGATGCC
TCAGTCGACTATCTTTGCGCAGTCTTCTTTATTTCATTGCATGCTCAACACTGCAGATCT
AGGTCATATGTCACCACAAACGTAAAGTCCCTGATTCGATTTCAAATCCGAATTTCCAAA
TTACGTCATTTTTATTTCTAGTGACTTTCTCATCTGATTCTTTCAAAACTTAGTCATCTG
ATTCTTTCAAAATACTGACCAATCGATTTTAAATACCTTTTTTCTCACCTCTGCAGCCAG
TCTTTAAATCTGTAATGAGTGACCGCAGTTTTATAAATGAATGCGAGCTACTAACTCAAA
ATTATTTTGCTTGCCCACATATAAGCTTATGACGTGCAATATACATATTATATAACGCTT
GTTGAACTATCTAATTAAAATATATCGATCTTTG
| ProSiteProfiles |
SH3_domain (IPR001452) - T[28-90] 14.956 |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[30-110] 6.56E-17 |
| SMART |
SH3_domain (IPR001452) - T[31-89] 5.1E-15 |
| PRINTS |
SH3_domain (IPR001452) - T[31-41] 7.2E-6 - T[46-61] 7.2E-6 - T[64-73] 7.2E-6 - T[76-88] 7.2E-6 |
| Pfam |
SH3_domain (IPR001452) - T[36-86] 6.6E-10 |
| Gene3D |
PX_dom_sf (IPR036871) - T[223-359] 3.2E-39 |
| SUPERFAMILY |
PX_dom_sf (IPR036871) - T[240-353] 7.98E-26 |
| SMART |
Phox (IPR001683) - T[242-352] 3.7E-18 |
| ProSiteProfiles |
Phox (IPR001683) - T[245-355] 16.589 |
| Pfam |
Phox (IPR001683) - T[248-351] 5.6E-17 |
| Pfam |
Sorting_nexin_WASP-bd-dom (IPR019497) - T[354-588] 7.8E-69 |
| SUPERFAMILY |
AH/BAR_dom_sf (IPR027267) - T[387-583] 9.42E-5 |
| Gene3D |
AH/BAR_dom_sf (IPR027267) - T[401-591] 1.5E-65 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SNX33_HUMAN | 33.39 % | 351 | 3.51E-114 |
| SNX9_HUMAN | 33.844 % | 316 | 2.77E-100 |
| SNX18_HUMAN | 45.794 % | 284 | 1.14E-87 |