- Transcript 'KH2012:KH.L133.11.v1...' >
- Transcript 'Boleac.CG.SB_v3.S49....' >
- Clone 'cima822425' >
- Clone 'AHC0AAA192YF21' >
- Transcript 'KH2012:KH.C1.50.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.50.v1.A.SL2-1
Possible name(s)
CHDH
Gene model
Location
KhC1 [2,894,628 / 2,901,879]
Amino acid sequence
Length: 563
>KH.C1.50.v1.A.SL2-1
IIDMKKYAFILCLFAVALKNLLPTVIHYCFTITIDKAENEYDFIVVGAGTSGCVVAARLS
EASNTRQVCNKSRWPRGKVLGGTSAINAMIYNRGSPYDYDLWSELGAEGWNYSQVLPFYE
KLENREQDNSRKSEDAPLHITTLKGLDKVGAFMEAGTELGYQIKKEYDDNFEGFYRVDAT
INQGKRETASTAYLRPAVRKRPDQLHVVVNAHVDKIIFEKQRAVGVTFLKDGKGSLVRAK
KEVIISAGAVSTPHLLMLSGVGNKDHLEKLNITSVADLPGVGSNLQDHFLTFGGFVEIEK
KTKSMISRIIDFVSNLSYIWSGKGFYGNNGVCNAYAMINVGNVTQPRADIVQLLMFSFET
TVNKANTQNFLATVIHGKLTSIFTQFRSEVLKDKPDDQVLTSFAISPCIMTPFSKGRITL
QSTDPLQQPNIDPNYLSDPKDAKMMVQAFRTAKKIANTTVFRKFGAKQKFLYDECNRKTG
DDLYDCLVRMETLTSYHPCCTAKIGNEKDNLAVVDPRLRVYKVKGLRIADASVMPAITSA
NIQAPCYMIGEKAAHMLKEDWRL
Nucleotide sequence
Length: 1,855
>KH2012:KH.C1.50.v1.A.SL2-1
ACATAATAGACATGAAGAAATACGCGTTTATATTATGTTTATTTGCTGTTGCATTGAAGA
ATCTTCTTCCAACTGTAATACACTATTGCTTCACTATTACCATTGATAAGGCGGAAAATG
AGTACGATTTCATTGTAGTTGGCGCTGGTACTTCAGGCTGTGTAGTTGCTGCTCGACTTA
GTGAAGCCAGCAACACAAGGCAAGTTTGTAATAAAAGTCGCTGGCCAAGAGGTAAAGTGT
TGGGAGGCACCAGTGCAATAAACGCCATGATCTATAACAGAGGAAGCCCGTATGACTATG
ATCTATGGAGTGAGCTAGGAGCAGAAGGTTGGAACTATTCGCAAGTTCTTCCATTTTATG
AAAAGTTAGAAAACCGCGAGCAGGATAACTCGCGAAAATCAGAAGACGCTCCTTTGCATA
TTACAACTCTGAAGGGATTGGATAAAGTTGGAGCTTTTATGGAAGCAGGAACTGAACTGG
GATATCAAATAAAGAAAGAATACGATGATAATTTTGAAGGATTCTATCGCGTTGATGCAA
CCATTAATCAGGGAAAAAGGGAAACTGCTTCAACCGCTTATCTTCGCCCGGCAGTTCGTA
AAAGACCAGATCAGTTGCACGTGGTAGTAAACGCACACGTTGATAAAATAATATTTGAAA
AACAACGAGCGGTCGGTGTGACTTTTCTTAAAGATGGCAAAGGAAGTTTGGTAAGAGCCA
AGAAAGAAGTCATTATATCCGCTGGTGCTGTTTCTACGCCGCACCTGCTCATGTTAAGTG
GAGTTGGAAATAAAGATCACTTGGAAAAACTTAACATTACTTCGGTGGCAGATTTGCCTG
GTGTTGGATCCAATCTTCAAGATCATTTCTTAACTTTTGGAGGATTTGTTGAAATAGAAA
AGAAAACTAAAAGCATGATATCACGAATAATTGATTTTGTTTCCAACTTATCATACATTT
GGTCTGGAAAGGGGTTTTACGGAAACAATGGTGTATGTAACGCTTATGCGATGATCAACG
TTGGCAATGTAACACAACCAAGAGCCGATATTGTCCAACTATTGATGTTCTCGTTTGAAA
CTACTGTTAACAAAGCTAATACACAGAATTTTCTAGCAACTGTGATCCACGGAAAGTTAA
CATCTATATTTACTCAGTTTCGCTCAGAAGTTCTCAAAGATAAACCAGATGACCAAGTTT
TGACTTCATTTGCCATAAGCCCTTGCATAATGACCCCCTTCAGTAAAGGCAGAATCACAT
TACAGTCAACAGATCCGTTACAGCAACCTAATATTGATCCTAATTACTTATCAGACCCGA
AAGATGCAAAAATGATGGTACAAGCATTTCGTACTGCAAAGAAAATTGCAAACACGACAG
TTTTTCGCAAGTTCGGAGCAAAGCAGAAGTTTTTATACGACGAATGCAACAGAAAAACTG
GAGATGATTTGTACGATTGTTTGGTAAGAATGGAGACTCTGACGTCATACCACCCATGTT
GTACAGCTAAGATAGGAAATGAGAAAGATAACTTGGCGGTTGTTGACCCCAGATTAAGGG
TCTACAAGGTAAAAGGCCTAAGAATTGCCGACGCTTCAGTAATGCCGGCAATAACATCAG
CAAATATACAAGCGCCGTGTTACATGATTGGCGAAAAAGCTGCTCACATGCTTAAAGAAG
ATTGGAGACTTTGAAAACTTTTCAAACGTGTTATTTTCTAATAAACGCGGCAAAAATTAC
GCACAATGCGAATTAGTGAAGTAATAATATTCAAAATTATACTTGTGCACGAGTTGGTAT
AGTTAATAAAAATTAATTTGTCGATTTACTAAGTATAATAAATACACACAAGTTG
| Gene3D |
FAD/NAD-bd_sf (IPR036188) - T[24-66] 3.1E-11 - T[76-125] 1.3E-135 - T[189-282] 1.3E-135 - T[497-558] 1.3E-135 |
| PIRSF |
GMC_OxRdtase (IPR012132) - T[31-69] 3.6E-10 - T[63-563] 4.0E-121 |
| SUPERFAMILY |
FAD/NAD-bd_sf (IPR036188) - T[33-282] 1.43E-65 - T[500-562] 1.43E-65 |
| Pfam |
GMC_OxRdtase_N (IPR000172) - T[73-289] 1.1E-58 |
| ProSitePatterns |
GMC_OxRdtase_N (IPR000172) - T[77-100] . - T[248-262] . |
| Pfam |
GMC_OxRtase_C (IPR007867) - T[412-553] 5.0E-40 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CHDH_HUMAN | 31.944 % | 279 | 1.5E-86 |