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  1. Transcript 'KH2012:KH.C1.513.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.513.v1.A.nonSL5-1

Possible name(s)

DNMT1; KDM2A; KDM2B

Location

KhC1 [3,358,728 / 3,366,373]

Sequences

Amino acid sequence

Length: 1,134

>KH.C1.513.v1.A.nonSL5-1
RMERKSEIFRNNQHLIEHKKDMFDNSVPKFSKKSNQGMEMRLRSKKNSTPSSAPKKRKAE
NFHLSLRSKSEPENTTSSKIPPVKRRKKVTSVKKKTPIKQIENNEKHHSAQPLNITLCKV
SNTNDCYTVKRQDKSYASAPENTSEPTDFNSAVLFTKTESESDSLHITAGPSLNISSPQN
KNTINLDKQVIPIPSQPPVAEETQALLNVNSNSEVNKKCIIEEKTDFSATCSDASQSTSP
RNKNTNNLDKQVIPIPLTVPVCKPQLTEETKAPHDVNSKPEVNTECIIEEKTDFSAMCGN
ASQSTSPQNKSTINLERQVIPIPSTTAVCKPQLTEETQALNDVNSNSEVNKECIIEEKTD
FSATCSDASQSTSPQNKNTINLDKQVIPIPSTVPVCKPQLTEETEALSDVNCDSEVNKEC
IIEEKTDFSAMCSDASQSTSPQNKNTINLERQVIPIPSTTAVCKPQLTEETQAPSDVNSN
PGVNTECIIEEKTDFSAMCGNASQSTSPQNKTTINFEKQVTPSQLAEETKALHSCNPEVN
KEGINKDKIDFSAKCSNASQSTSKRYSICYEQKKKKGCNDLLLDPFSHKQAKTFTIEKKT
PTSKNAGTVDQVLFMNQLDLIKTSSTKRTRDLPKYKTKVKTPLREKLGFPPKNLFYYGTG
KLPCPDLGEGWYFEQIVRQHGKSAGHPQNVRIRSKARLAMLAPSSVSIEDFDFNAGKIVK
QKEHLCKKEALITEKLFRSSKKVNISNMISPKDSKQDESSTLSNVYSLVFISKTTMFKAR
KPGRKRKLFGIDKVLKKRRVISTVPSITDHSEPVKQADQHPMSAFEIFKADAMKSCSEII
NSVEFPELLRLLAWKNLGDKKRQMYNKSEKERFTISPSQTKTTPKFIPSPSQVPRTFPPL
VPSSKLQKNTPNRGLFRTIRCKTCEPCLRPNCGECYNCRDMRQFGGSGKKKQSCIQRKCL
RPSKNMSKRYSFTQHATPLAMPAQEVNRHPIFPVDTTLQQIILPTQPSFSQCTTSTSPFK
RPGEMISNNLNNPFLQNFVTHNNNMSMPPQTSNLNPSSCNITGGLMNSWNSANTTANFPC
SSHQPPKTQILNNFSTVNKRKRTQLNPRRFLDINQSQDQQPVQAHLKSGPPVLT

Nucleotide sequence

Length: 3,768

>KH2012:KH.C1.513.v1.A.nonSL5-1
GCAATGCTGACGCAAATGTGTACCAGCTTCGGAGGCGCGCTGAAATAACGAGATCAATAA
GCACCGAATTTAAAGAATGGAAAGAAAATCTGAAATATTTCGAAACAACCAACACCTTAT
TGAACATAAGAAGGATATGTTCGATAATTCTGTTCCAAAATTTTCAAAGAAAAGCAACCA
GGGTATGGAAATGAGACTACGTTCCAAGAAAAACAGCACTCCCAGTAGTGCACCAAAAAA
GAGAAAAGCTGAAAACTTTCATCTTAGTTTACGAAGTAAATCAGAACCGGAAAATACTAC
TAGTTCGAAGATACCACCAGTAAAGCGTCGCAAAAAAGTGACTTCGGTTAAAAAGAAAAC
CCCCATAAAGCAAATTGAGAATAATGAAAAGCATCATTCTGCTCAACCCTTGAACATTAC
GCTGTGCAAAGTTTCCAATACCAATGACTGCTACACTGTGAAAAGGCAAGATAAAAGCTA
CGCTTCTGCCCCTGAAAATACTTCAGAACCAACAGATTTCAACTCAGCTGTTCTTTTTAC
AAAAACTGAATCGGAATCAGATTCCCTTCATATTACTGCTGGACCTTCTTTAAACATTTC
AAGCCCACAGAATAAAAACACCATTAATTTGGACAAGCAGGTCATACCAATACCATCACA
ACCCCCAGTTGCTGAAGAAACTCAGGCACTGCTTAATGTTAATTCTAATTCTGAGGTAAA
CAAAAAATGTATCATTGAAGAGAAAACAGATTTTTCAGCCACATGTAGTGATGCCAGTCA
ATCCACAAGTCCACGGAATAAAAACACCAATAATTTGGACAAGCAGGTCATACCAATACC
ATTAACAGTCCCTGTTTGTAAACCACAACTTACTGAAGAAACTAAGGCACCACATGATGT
TAACTCTAAACCTGAGGTAAACACAGAATGTATCATTGAAGAAAAAACAGATTTTTCAGC
AATGTGTGGTAATGCCAGTCAATCCACAAGTCCACAGAATAAAAGCACCATCAATTTGGA
GAGGCAGGTCATACCAATACCATCAACAACTGCTGTTTGTAAACCACAACTTACTGAAGA
AACTCAGGCACTAAATGATGTTAATTCTAATTCTGAGGTAAACAAAGAATGTATTATTGA
AGAAAAAACAGATTTTTCAGCCACGTGTAGTGATGCCAGTCAATCCACAAGTCCACAGAA
TAAAAACACCATCAATTTGGACAAGCAGGTCATACCAATACCATCAACAGTCCCCGTTTG
TAAACCACAGCTTACTGAAGAAACTGAGGCACTAAGTGATGTTAATTGTGATTCTGAGGT
AAACAAAGAATGTATTATTGAAGAAAAAACAGATTTTTCAGCCATGTGTAGTGATGCCAG
TCAATCCACAAGTCCACAGAATAAAAACACCATCAATTTGGAGAGGCAGGTCATACCAAT
ACCATCAACAACTGCTGTTTGTAAACCACAGCTTACTGAAGAAACCCAGGCACCAAGTGA
TGTTAATTCTAATCCTGGGGTAAACACAGAATGTATCATTGAAGAAAAAACAGATTTTTC
AGCCATGTGTGGTAATGCCAGTCAATCCACAAGTCCACAGAATAAGACCACCATCAATTT
TGAGAAGCAGGTTACACCATCACAGCTTGCTGAAGAAACTAAAGCACTTCATAGTTGCAA
TCCTGAGGTGAACAAAGAAGGTATTAATAAAGATAAAATAGATTTTTCAGCCAAGTGTAG
TAATGCCAGTCAATCCACATCTAAGCGCTACTCAATTTGTTATGAACAAAAAAAGAAAAA
AGGCTGCAACGACTTGCTTTTGGATCCGTTCTCACATAAGCAGGCCAAAACCTTCACCAT
TGAAAAGAAAACTCCTACAAGTAAAAATGCAGGGACTGTTGATCAAGTTTTATTTATGAA
TCAGTTAGATCTAATCAAAACATCTTCCACAAAACGTACGCGCGACCTTCCAAAATACAA
AACAAAAGTAAAAACTCCTCTAAGAGAAAAACTTGGTTTTCCTCCGAAAAATTTGTTTTA
CTACGGGACAGGAAAACTCCCATGTCCTGATCTTGGGGAAGGGTGGTATTTTGAACAAAT
AGTTCGCCAGCATGGAAAATCAGCTGGACACCCACAAAACGTAAGAATCCGTTCTAAAGC
AAGATTGGCGATGCTCGCGCCAAGCTCTGTATCCATTGAAGATTTTGATTTTAATGCTGG
GAAAATTGTAAAACAGAAAGAACACTTGTGTAAGAAGGAAGCGCTAATCACAGAGAAATT
ATTCCGAAGTTCTAAGAAAGTCAATATAAGCAACATGATTTCTCCTAAAGATTCAAAGCA
AGATGAAAGTTCAACATTGAGCAACGTATACAGCCTAGTATTTATTTCTAAAACAACAAT
GTTTAAAGCACGAAAACCAGGAAGAAAGCGAAAATTATTTGGGATTGATAAAGTTCTAAA
AAAACGCCGTGTCATTTCCACTGTCCCAAGTATCACTGACCACTCTGAACCTGTTAAACA
AGCAGACCAACATCCAATGTCAGCATTTGAGATTTTCAAAGCAGATGCCATGAAAAGTTG
TTCAGAAATCATTAATTCAGTTGAATTTCCTGAACTGCTTCGACTTTTAGCTTGGAAAAA
CTTGGGTGACAAAAAGCGACAAATGTACAACAAATCGGAAAAAGAGAGATTTACCATCAG
CCCCTCCCAAACCAAAACTACACCAAAATTTATCCCAAGTCCTTCACAAGTGCCTAGAAC
CTTCCCACCCTTGGTTCCATCATCAAAGCTGCAGAAAAACACTCCAAACAGAGGGTTGTT
CAGAACTATTCGATGTAAAACATGTGAACCATGTCTTAGACCCAACTGTGGGGAATGTTA
TAATTGCAGGGACATGCGTCAGTTTGGGGGCAGTGGTAAAAAGAAACAGAGCTGCATACA
ACGTAAATGTTTACGACCCAGCAAAAATATGTCGAAAAGATATTCCTTCACACAACATGC
GACACCTTTAGCAATGCCAGCGCAGGAAGTTAACAGACATCCTATTTTTCCTGTGGATAC
AACATTGCAGCAAATTATTTTGCCCACGCAACCTAGCTTTTCCCAATGTACTACGTCTAC
AAGTCCATTTAAAAGACCTGGAGAAATGATCAGTAATAATTTAAACAACCCATTTCTTCA
GAATTTTGTTACACACAACAATAACATGTCTATGCCACCACAAACTTCAAATCTCAACCC
ATCTTCATGTAATATTACTGGTGGTTTAATGAATAGTTGGAATTCTGCCAACACAACAGC
AAACTTTCCCTGTTCATCCCATCAACCACCTAAGACACAAATTTTAAACAATTTTTCGAC
CGTGAACAAACGTAAGCGGACACAGCTAAACCCAAGAAGATTTTTAGATATAAACCAGAG
TCAAGACCAACAACCTGTGCAAGCTCATTTGAAATCTGGTCCACCAGTTTTGACATAAAA
CAACTACAAACTTTGTACAGTGACTATTGGTGTTGGTGTTGACCAAGCTAAGCAATCTTG
CCAACCCAAGCAGAGTATATTGAGTAGTTGTAAACCACAGAATATTATTGCCCTAGAATA
GATTAAGCATTCTAGAAAGTTCATTTTAATCTTTAGGTTGCAATCAGTGAATAGCTCGTT
TATTTAAATACTTATACTATAATGCAGTTTTATTCCACACAAACTTGATTTTATGAAAAT
TTCATCTATTTATATATTTCTTTATTGCTTTCGTTCTGTGTACTTCTT

InterProScan

SUPERFAMILY
DNA-bd_dom_sf (IPR016177) - T[661-730] 1.83E-8
ProSiteProfiles
Znf_CXXC (IPR002857) - T[914-960] 12.235
Pfam
Znf_CXXC (IPR002857) - T[915-959] 2.3E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value