- Transcript 'KH2012:KH.C8.241.v3....' >
- Transcript 'KH2012:KH.C1.546.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.546.v1.A.SL1-1
Possible name(s)
FBXL2; FBXL20; FBXL7
Gene model
Location
KhC1 [1,633,446 / 1,645,946]
Amino acid sequence
Length: 475
>KH.C1.546.v1.A.SL1-1
MLEPLRKKKRRVEHCDYVNEDKENLEASVSAMSSRTENFKQKLEEFKTRQAFLPSENEGL
INHKLPKELLLRIFSYLDIVTLCRCAQVSPSWNNLALDGSNWQRVDLFLFQTVVEGGVVE
NLSKRCGGFLKQLSLKGCENVEDKTLRVFSQNCRNLDRLNLYNCKKITDQTLISLGKNCP
QLHYLDTSSCTQITDQGLKHLGEGCPLLSHLDISWCDRITDRGIRHLTNGCPKLKHLLVK
GVTRLTDNSLENIAKNCPCLLLLNLHKCGNITDEGIQKLTEGCKNLESLNLSECLNLQDE
SLQSLSLHCHKLKTLEVALCSNLTDTGFISLAKSCPDLERMDLEECVQVSDKTLRYLSIH
CIKLTELTLSHCELITDEGIQDLGSGSCASEHLEVLELDNCPLITDNSLEHLVGCQNLSR
LELYDCQLITRAGINKLKEQNRKLVIHAYFAPITPQPSVGPATRRLCPDCNCIIL
Nucleotide sequence
Length: 2,637
>KH2012:KH.C1.546.v1.A.SL1-1
TTGGATTATGTGCTGATTAAGTTTACTTAATGCTAAATAGGTTGATCCCATTTACTGCTC
AGACTTTATTAATAGTTGCAACTTGCATATGTTATCTTGTGTTGTAGCTTTTAGTCGCTC
CTCATTGCCAATGGCACGAGCCGTGTAGATGTTGGAGCCACTTCGTAAAAAGAAACGTAG
AGTAGAACATTGTGATTACGTGAACGAGGATAAGGAAAACCTTGAAGCTTCCGTGTCCGC
AATGTCGAGTCGCACAGAGAACTTCAAGCAAAAGTTGGAGGAGTTCAAAACTCGTCAAGC
ATTCCTGCCCTCGGAGAATGAAGGTCTCATTAACCACAAACTCCCAAAAGAATTGTTGCT
TCGGATATTCTCATATCTGGATATTGTAACTTTATGCAGATGCGCACAGGTGTCCCCATC
ATGGAATAACTTAGCACTGGATGGCAGCAACTGGCAAAGGGTAGACTTGTTCCTGTTTCA
AACTGTAGTTGAGGGAGGCGTTGTTGAGAATTTATCCAAGCGATGTGGTGGCTTCCTCAA
GCAATTATCATTGAAAGGTTGTGAAAATGTGGAGGATAAAACGTTGAGGGTGTTCAGTCA
AAACTGTCGTAATCTTGACCGACTTAACTTGTACAACTGCAAGAAGATAACTGACCAGAC
GCTTATAAGCCTTGGTAAGAATTGCCCTCAGCTACATTATCTTGATACAAGCTCGTGTAC
ACAAATAACTGACCAGGGACTTAAACATCTTGGAGAGGGATGTCCCCTGTTGTCCCACCT
CGATATATCATGGTGTGATCGAATCACTGATCGTGGGATACGTCATCTCACCAATGGATG
TCCTAAGCTCAAACATTTGCTTGTGAAGGGAGTTACTAGGTTAACAGACAACTCGCTTGA
AAACATTGCAAAGAATTGTCCATGTTTGCTGCTGCTTAACCTTCATAAGTGTGGGAACAT
AACAGATGAAGGAATACAGAAACTCACTGAGGGTTGCAAGAACCTAGAATCACTTAATCT
ATCTGAGTGTTTAAATCTTCAAGATGAATCTTTACAATCACTTAGTCTGCATTGCCATAA
GTTAAAGACATTAGAAGTTGCTTTGTGCTCAAATCTCACCGATACTGGATTTATAAGCCT
TGCCAAGAGTTGTCCTGATTTGGAGCGAATGGATTTAGAAGAATGCGTTCAAGTATCGGA
CAAAACACTTCGTTATCTATCAATACACTGTATCAAACTAACAGAACTGACGTTATCCCA
CTGCGAGTTGATCACAGATGAAGGAATTCAAGATCTTGGGTCTGGGTCTTGTGCATCGGA
GCACCTGGAAGTTCTGGAACTCGATAATTGTCCTCTTATAACCGACAACAGTCTCGAGCA
TCTAGTTGGGTGTCAGAATTTGAGTCGATTGGAACTTTATGATTGTCAGTTGATCACTCG
AGCTGGGATTAATAAACTAAAGGAACAAAATCGCAAGCTAGTAATCCATGCGTACTTTGC
ACCAATTACCCCCCAGCCCTCTGTTGGCCCGGCAACCCGCAGACTGTGCCCTGACTGCAA
CTGCATAATTTTATGATAAGAGGCTACTTTCCCCGACCTAGAAGTCCACGCTTATTTTGC
CCCCAACTCCCCAGCGCCCTCCATTAACAACAACAATCGTTCTGGCCGGAGAAAATATTG
CAGATGCTGCATATTATTGTGATAGTTGAACCAAAAATAATCAGAAATAATTTACTGTGA
AAACTAAATCTAGCTAACCAAATAATTCTGTAGCAGGCAATTCGATCTGAATTAAATGAA
AAGTCAAAAGTTCTACAAGTTACAGTGACAAAGCACAGAAACTTTTTCTTTGAAGGCTAA
TTTCCTATGTCGGATTTTTGCATATTATTGTGTGATCCAGTTTTATGAAACCTTTTTCTT
AAAATCATATTCTCTCACATTCGGTTACATGACAAGCCTATGCTTGCAAAATTAATGCAT
CCTTTTATGAATCGTGGTTTAAAATTGGGAGTTTTTTCAAAAACTGATATTTTTCTCTTT
CTGTTTTTTTCCTGTGTTTTGTAGGCAATATTAACAAATTTTTCTTTGACATTGTTTTTT
CCCTAAACTCCTTTTTTTATTTTATACTCTTCTGTTTTGTAAACTATTCTCTTTGTTGTA
TATACAAGTGCATTGCACTATTGGCACAATTTCCCCACCCTGTACATTATAATGTGCCGC
ACCTAAATAGGCGTTCAGTATTCCCTTTTTTCTTTCTACGTGAATTAAGTAGGCTGTTGT
ACATACATCCTTGAGACCACATACTATGGGGATATGTTGTTTTAGTTTCGTACACATTGA
GACATCGTAATGGTACAACACGCTTGCATCTGCTCTATTTCTTATTGGAAATGTCAAAGA
CAATTTTCTTCTAAGAAGCTCCAAGAATTACAGAAAGTTATTTGCTGGAAAGGAATAAAC
TTGTTATTTTTATGGTGCTATAAACTGATTACTGCCTCTAAATGAGTAGTAACTTTTTGA
ACAACTATTTTTCTGCTAGTTGCTGCGTTCGTAACATATATATTCACATGTGGAATTGTA
TGAACTTTCTTATGTAAGGTTACAACTGGTATTTCCTTTTAAAAATGTCGCTAAACA
| ProSiteProfiles |
F-box_dom (IPR001810) - T[59-105] 12.332 |
| Pfam |
F-box_dom (IPR001810) - T[64-107] 2.6E-12 |
| SMART |
F-box_dom (IPR001810) - T[65-105] 1.8E-8 |
| SMART |
Leu-rich_rpt_Cys-con_subtyp (IPR006553) - T[127-152] 6.0 - T[153-178] 5.1E-6 - T[179-204] 2.9E-4 - T[205-230] 2.1E-7 - T[231-256] 0.0018 - T[257-282] 0.016 - T[283-308] 0.0077 - T[309-334] 2.9E-5 - T[335-360] 0.012 - T[361-386] 1.0E-6 - T[390-414] 210.0 - T[415-440] 8.6 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[144-241] 7.4E-25 - T[244-454] 3.6E-47 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[178-201] 0.81 - T[205-227] 0.019 - T[256-279] 1.6 - T[283-306] 0.36 - T[308-332] 0.45 - T[360-383] 0.0013 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBXL7_HUMAN | 29.155 % | 164 | 3.02E-45 |
| FXL20_HUMAN | 58.974 % | 504 | 1.84E-177 |
| FBXL2_HUMAN | 57.518 % | 478 | 1.25E-167 |