- Clone 'CCTT442' >
- Transcript 'KH2012:KH.C10.246.v3...' >
- Transcript 'KH2012:KH.C1.570.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.570.v1.A.nonSL2-1
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
KhC1 [6,945,755 / 6,947,848]
Amino acid sequence
Length: 399
>KH.C1.570.v1.A.nonSL2-1
TFTRLQASSLHSTNSSKQTSIMSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVG
RPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRV
APEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDAG
DGVSHNVPIYEGYALPHAIARLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKL
CYVALDFEQEMATAASSTSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHE
TTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERK
YSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 1,314
>KH2012:KH.C1.570.v1.A.nonSL2-1
GCACATTCACTCGCTTACAAGCTTCTAGTCTTCACTCAACCAACTCAAGCAAGCAAACTT
CAATCATGTCGGACTCAGAAGAAGATCAAACCGCTCTGGTTTGCGACAACGGTTCAGGAT
TAGTAAAATCAGGATTCGCCGGAGATGACGCACCTCGTGCTGTCTTCCCATCCATCGTTG
GTCGGCCCCGCCACCAGGGTGTCATGGTCGGTATGGGCCAAAAAGACAGCTACGTTGGCG
ACGAAGCACAAAGCAAGCGAGGTATTCTTACCTTGAAATACCCGATTGAGCACGGTATTA
TCACTAACTGGGACGACATGGAAAAGATCTGGCATCACACTTTCTACAACGAGCTCCGTG
TTGCTCCCGAAGAACACCCGACTCTGCTCACCGAAGCTCCACTTAACCCAAAGGCTAACC
GAGAAAAGATGACCCAGATTATGTTTGAAACCTTCAACGTACCGGCCATGTATGTCGCCA
TTCAAGCCGTGCTCTCTTTATACGCATCTGGACGTACAACAGGTATCGTCATGGACGCTG
GTGACGGTGTTTCACACAACGTTCCAATCTACGAGGGATACGCGCTCCCTCACGCCATCG
CCCGGTTGGATTTAGCTGGACGAGATCTCACAGATTATTTGATGAAGATACTTACAGAGA
GAGGCTACTCTTTCGTTACAACCGCCGAGCGTGAAATCGTTCGAGATATCAAAGAGAAGC
TCTGTTACGTTGCGCTCGACTTCGAGCAGGAGATGGCCACCGCAGCATCTTCCACATCCC
TAGAGAAGAGCTACGAACTTCCCGACGGTCAAGTCATCACTATCGGAAACGAGAGGTTCC
GATGCCCGGAAACTCTCTTCCAACCTTCCTTCATCGGTATGGAATCTGCTGGAATCCACG
AGACCACCTACAACTCCATCATGAAGTGCGACATTGACATCCGAAAGGATCTTTACGCCA
ACAACGTTCTCTCCGGAGGTACAACCATGTACCCTGGTATCGCTGACAGAATGCAGAAGG
AGATCACTGCTCTCGCTCCCAGCACCATGAAGATCAAGATCATTGCTCCACCAGAGAGGA
AATACTCCGTATGGATCGGAGGATCCATCCTCGCTTCTCTTTCCACCTTCCAACAGATGT
GGATCACCAAGCAAGAATACGACGAAGCTGGCCCATCTATTGTCCACCGAAAATGCTTCT
AAACAAGAAAAGAACTCTCAACTAATTTGCACATCGTCGTTTAATTAACGAGCCGTAATT
TATCAGTTAGGTAATTCGAATTGTAAATAAACCAGTCTTATCGAAAAATCTATG
| PANTHER |
Actin (IPR004000) - T[26-398] 2.4E-266 |
| Pfam |
Actin (IPR004000) - T[28-399] 4.3E-147 |
| SMART |
Actin (IPR004000) - T[29-399] 2.0E-232 |
| PRINTS |
Actin (IPR004000) - T[50-59] 3.2E-57 - T[73-84] 3.2E-57 - T[85-107] 3.2E-57 - T[139-152] 3.2E-57 - T[164-183] 3.2E-57 - T[260-276] 3.2E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[77-87] . - T[380-388] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[128-140] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 97.059 % | 769 | 0 |
| ACTS_HUMAN | 97.059 % | 770 | 0 |
| ACTC_HUMAN | 96.825 % | 769 | 0 |