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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  2. Clone 'man28l22' > 
  3. Transcript 'KH2012:KH.C1.596.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.596.v1.A.nonSL3-1

Possible name(s)

RDH11; RDH13; RDH14

Gene model

KH2012:KH.C1.596

Location

KhC1 [923,486 / 926,376]

Sequences

Amino acid sequence

Length: 278

>KH.C1.596.v1.A.nonSL3-1
ETAIDLVKREARVILGCRNMAKAEEAKQRIITETGGNEDKIILKQLDLASFASVRAFAKD
VNENESRIDVLLNNAGIMLIPKGKTEDGFELHYGVNHLGHFLLTNLLLDLVKKSAPSRII
NVSSEAHRLGSPRIDWDDMNYDNNYSASLAYNRSKLMNILFTRELSRRLEGTKVTANSLH
PGVVRTELSRHMFDSNISMWRTAVKWIVDPLVYLFGKTPVHGAQTNIYLCIAPEVENVSG
KYFKDCAIANENGQAKSDQDAKRLWDLSVEVTGLSEGS

Nucleotide sequence

Length: 950

>KH2012:KH.C1.596.v1.A.nonSL3-1
GGAAACAGCAATCGACCTTGTAAAGCGCGAAGCAAGAGTAATTCTCGGGTGTAGAAATAT
GGCGAAAGCTGAAGAAGCGAAGCAAAGGATTATAACGGAAACCGGCGGAAATGAAGATAA
AATTATTTTAAAGCAACTAGATTTGGCATCTTTTGCCTCAGTGCGCGCATTTGCAAAAGA
TGTGAATGAAAACGAAAGCAGAATCGACGTTTTACTTAACAACGCAGGTATAATGCTAAT
CCCGAAAGGAAAGACTGAAGACGGGTTTGAGCTTCATTACGGAGTGAACCATCTCGGGCA
TTTTCTTCTCACTAATCTATTACTCGATCTTGTAAAGAAAAGCGCACCAAGTCGAATTAT
AAACGTATCATCGGAGGCACACAGACTTGGGAGCCCCAGAATCGACTGGGACGACATGAA
TTACGACAACAATTATTCTGCATCGTTGGCTTACAACCGAAGCAAACTGATGAATATTTT
ATTTACAAGAGAGCTGAGCAGAAGATTAGAGGGTACCAAGGTAACGGCAAACAGCTTGCA
TCCTGGTGTTGTGAGAACAGAGCTTTCTCGGCATATGTTCGATTCAAATATATCTATGTG
GAGAACTGCTGTCAAATGGATTGTGGACCCGCTTGTTTATTTGTTCGGTAAAACTCCTGT
ACACGGAGCCCAGACTAATATCTACCTGTGCATTGCACCGGAAGTGGAGAACGTCAGTGG
GAAATATTTTAAAGATTGCGCGATTGCGAATGAAAATGGTCAAGCCAAGAGCGACCAGGA
TGCAAAAAGATTATGGGACTTGAGCGTTGAAGTTACGGGGTTGTCAGAGGGTTCTTAATC
ATGTTAAAGTTAATTTATATATACAGGAAAGGTTTAACTATTTCTGTATACTTCGTTGTC
CAATTCTAGTGAAAAATAACTGTAAAATAAATTATATAATGAAAAAATAA

InterProScan

Pfam
SDR_fam (IPR002347) - T[1-192] 4.0E-23
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[2-248] 3.09E-48
PRINTS
SDR_fam (IPR002347) - T[66-77] 3.5E-11 - T[66-77] 1.9E-6 - T[111-127] 3.5E-11 - T[117-125] 1.9E-6 - T[151-170] 3.5E-11 - T[151-170] 1.9E-6 - T[172-189] 3.5E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 48.175 % 236 4.57E-77
RDH13_HUMAN 47.312 % 227 3.61E-73
RDH14_HUMAN 51.408 % 254 6.1E-84