Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.663.v1.A.SL1-1

Possible name(s)

PRELID2; PRELID3A; PRELID3B

Gene model

KH2012:KH.C1.663

Location

KhC1 [9,318,389 / 9,325,498]

Sequences

Amino acid sequence

Length: 248

>KH.C1.663.v1.A.SL1-1
VNYCSCLVGCRKMVFFSFDEHVFSHPWEKVVEAALRKYPNPESPNVTGTDVFERKVDEKG
RLCSQRIISSLWSNSYLNLIEKVAGLDMKKTFHAIEYSVLDPKERSFELSSRNYNFMDYI
TVDEKLVYQPHATDPNMTVLKQQWHITCKNLSFVSFFENAMGTTMMAASVKGRQGIEYVI
NQVREEVERIASAPIEEMQTLATNTMKEINSFQQSIGGMGRRWEENLHEELNEFIAKSGS
NLIEQPQN

Nucleotide sequence

Length: 1,097

>KH2012:KH.C1.663.v1.A.SL1-1
GTACTTTGCACAAACTTGGTGTATTTTAAGTGTTATATAAAATTAGGTAAATTATTGTTC
TTGTCTTGTTGGTTGTCGTAAGATGGTATTTTTTTCATTTGATGAACATGTATTCAGCCA
CCCTTGGGAAAAAGTGGTTGAAGCCGCTTTAAGAAAATATCCGAACCCAGAATCTCCCAA
TGTCACTGGGACAGATGTCTTCGAACGTAAAGTAGATGAAAAAGGAAGATTGTGTTCACA
ACGTATTATATCATCTCTATGGTCAAACTCCTACCTCAATCTTATTGAAAAAGTAGCAGG
GCTCGACATGAAAAAAACTTTTCATGCGATTGAATATTCTGTCCTTGATCCAAAAGAAAG
GTCATTCGAACTCAGCTCAAGAAATTACAACTTCATGGATTACATTACTGTTGATGAAAA
ACTGGTTTACCAGCCTCATGCAACAGACCCTAACATGACTGTATTGAAACAGCAATGGCA
CATAACTTGCAAGAACTTGTCTTTTGTAAGCTTCTTTGAAAATGCCATGGGGACAACTAT
GATGGCGGCCTCTGTGAAGGGCCGACAAGGGATAGAATATGTGATCAACCAAGTAAGAGA
AGAAGTTGAAAGAATTGCGTCAGCGCCGATTGAAGAGATGCAAACCTTAGCCACGAACAC
GATGAAAGAAATTAATTCATTCCAACAAAGTATTGGTGGTATGGGACGACGCTGGGAGGA
AAATTTGCACGAAGAACTGAATGAATTTATTGCAAAATCAGGTTCAAATTTAATCGAACA
GCCACAAAACTAAAGTTTTTTTTCCCATTGTACAAGTTGTCGACTGGAGTTTGATTTTCT
TTTAGAATATTTTCCCTTTTTTTTTATTTATGTTCCCTTTTGTGTGCAAGTATTTCTATG
CATATTTACTTCACATTTCTTGCTGAAAACAAACCATAATTGTTGATGTTCTTCTGGTAT
TTTTGTATTTCAACAACCCTACTTGGTTTCATAAACATTAAACATAGGACTTGTTTTATT
GCATTAAAACCACTGCAAAGGCAGTTAACACATCAAATATTTATGGCAGGTTGAATAAAT
GGTTATTCTCTACAAAT

InterProScan

ProSiteProfiles	PRELI/MSF1_dom (IPR006797) - T[13-188] 38.567
PANTHER	Slowmo/Ups (IPR037365) - T[19-207] 7.5E-51
Pfam	PRELI/MSF1_dom (IPR006797) - T[28-185] 1.9E-35

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PLD3B_HUMAN	41.379 %	159	6.81E-49
PLD3A_HUMAN	43.21 %	147	1.65E-44