- Transcript 'KH2012:KH.C1.728.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.728.v1.A.ND1-1
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
KhC1 [9,357,099 / 9,358,151]
Amino acid sequence
Length: 247
>KH.C1.728.v1.A.ND1-1
SKQTLIMSDSEEDQTALVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKD
SYVGDEAQSKRGILTLKYPIEHDIKEKLCYVALDFEQEMATAASSTSLEKSYELPDGQVI
TIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPG
IADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPS
IVHRKCF
Nucleotide sequence
Length: 807
>KH2012:KH.C1.728.v1.A.ND1-1
AGCAAGCAAACTTTAATCATGTCAGACTCCGAAGAAGATCAGACCGCTCTGGTTTGCGAC
AATGGATCAGGATTAGTGAAATCAGGATTCGCCGGAGATGACGCACCTCGAGCTGTCTTC
CCATCCATCGTTGGTCGACCCCGCCATCAGGGTGTCATGGTCGGTATGGGACAAAAAGAC
AGCTACGTTGGTGACGAAGCACAAAGTAAGCGAGGTATCCTGACTCTGAAATACCCGATC
GAGCACGATATCAAAGAGAAGCTCTGCTACGTGGCGCTCGACTTCGAGCAAGAGATGGCC
ACCGCAGCATCTTCCACCTCCCTAGAGAAGAGCTACGAACTTCCCGACGGTCAAGTCATT
ACCATCGGAAACGAGAGGTTCCGATGCCCGGAAACTCTCTTCCAACCTTCCTTCATCGGT
ATGGAATCTGCTGGAATCCACGAGACAACCTACAACTCCATCATGAAGTGCGACATTGAC
ATCCGAAAGGATCTGTACGCCAACAACGTTCTCTCCGGAGGTACAACCATGTACCCTGGT
ATCGCTGACAGAATGCAGAAGGAAATCACTGCTCTTGCTCCCAGCACCATGAAGATCAAA
ATCATTGCTCCTCCAGAGAGGAAATACTCTGTCTGGATCGGAGGATCCATCCTCGCTTCC
CTCTCCACCTTCCAACAGATGTGGATCACCAAGCAAGAATACGACGAAGCCGGCCCATCT
ATTGTCCACCGAAAATGTTTCTAAATATTTAACTCTTGTGTTTATACTTTTTAAATAAAC
CAATATAATCGCCTGTTTCACAAAAAA
| PANTHER |
Actin (IPR004000) - T[11-84] 7.3E-158 - T[83-246] 7.3E-158 |
| SMART |
Actin (IPR004000) - T[14-247] 7.4E-74 |
| PRINTS |
Actin (IPR004000) - T[35-44] 1.4E-14 - T[58-69] 1.4E-14 - T[70-92] 1.4E-14 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[62-72] . - T[228-236] . |
| Pfam |
Actin (IPR004000) - T[82-247] 1.3E-67 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 74.059 % | 343 | 6.4E-119 |
| ACTS_HUMAN | 74.059 % | 345 | 2.37E-119 |
| ACTC_HUMAN | 74.059 % | 344 | 3.91E-119 |