- Transcript 'Cisavi.CG.ENS81.R9.3...' >
- Transcript 'KH2012:KH.C1.753.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.753.v1.A.nonSL2-1
Possible name(s)
DHX36; DHX37; DHX40
Gene model
Location
KhC1 [8,146,658 / 8,160,363]
Amino acid sequence
Length: 1,178
>KH.C1.753.v1.A.nonSL2-1
LKNMGRARRKHAAGTQKLARPEKQPTVLVEKDVELKGIDESNSLVLPDKKDRKLHKEIDK
PLPRKLSKKQRKKFEKVLDQKRKKEKRSALLESLSSVQVSSSELALFDSVAHLGTKNSKL
KLLSKRPLPSDLKQAIASQENEPNASVNSLAGKRKRRKLTKKEKPLKPVAPPQEEETEES
SSDDEDQNVENDVSMSEQDHSTEDEKQEEKVEKSKNTENSESAKENMEIVSDQKSEPQSV
KKEVEKTKESKPVTFVSLDRTAAIQEARLALPILAEEQVIMEAINENQVVVICGETGSGK
TTQVPQFLYEAGYARHGMVGVTEPRRVAAVNMSKRVAVEMNLPTSKVSYQIRYDNNVTED
TCIKFMTDGVLAREMKADFLLTKYSVLILDEAHERTANTDLLIGLLSRVVPMRNKRGKPL
KLIIMSATLRVEDFTKNERLFKTPPPVLKIETRQFPVTVHFSKRTPQEDTEDGTRFAYLD
EAYKKICKIHRTLPAGGILVFVTGKQEVHALKRKLSNTFPTEMQLNRQLNNNEQISVKDE
EKLPSINLDKYKPTPDEDEDEDFDVKPTEDLLLSEDEDQSDSELWMDDSAYSSDADHTLP
MRVLPLYAMLPAHKQKLVFEPVPTGFRQCVIATNVAETSLTIPGVKYVVDTGKVKRRVYD
KTTGVSTFRIGWVSKASANQRAGRAGRTEAGHTYRLFSSAVFQDFEDFDLPEISSKPVAG
LVLQMKSMNIDRVVNFPFPTPPSHKALEGAEELLTSLGAIEKPPRNLTVAELKKVKHSGS
ISELGRLIASFPVHPRYGKMIAVAINNERKLLEYVITIVAALTVKEMFAVSDFDAERSNG
KEKQRHLAARLQHMKVLWCTGGGPQRRLLGDPMVYMGAIGAAEFAGATPSYCANNCLRPK
AIIEVRKLRSQLTNLVNKIQPECELELNPKMNPPNDTQVKHLRQIILSAMPDRVARRIPT
DELPKEEAKKLKGAYRCALLENPIFIHPESILSRDPLPFFLVFQEVMETREGKKTYMRDI
TEIEPNWLATFCPQHCVFSKPLDDPMPTYDPVLDEVKCHVTATYGRLSWPLGAVEIPYPA
GLDRFRWFARFLLEGSVMTSLGQFSSLFLSRPATMVKSWSNLQPRTESLLKALAGRGVDS
KKKLTEIWKDNPSYLREELLEWLAPGSHQHFLSSWPLS
Nucleotide sequence
Length: 3,968
>KH2012:KH.C1.753.v1.A.nonSL2-1
GAAAAGTCAAAAGTTTGATAAAAGTGATTGAAATTTTTGCTTTGTAGAAGAAAAGTTTTA
CATTTTTAGTTAAAGAACATGGGCCGAGCTCGCCGCAAGCATGCAGCTGGTACACAGAAG
CTAGCTCGACCGGAAAAACAGCCGACTGTTTTGGTTGAAAAAGACGTGGAATTAAAAGGG
ATTGATGAGAGCAACTCACTGGTTCTTCCTGATAAGAAAGACAGAAAACTTCACAAAGAA
ATAGACAAACCGCTTCCCCGAAAACTGAGTAAAAAGCAACGGAAAAAATTTGAAAAAGTT
TTGGATCAAAAAAGAAAAAAAGAAAAAAGATCTGCACTGCTCGAAAGTTTGTCTTCTGTT
CAAGTGAGCTCATCAGAGCTGGCATTGTTTGATAGTGTTGCCCACCTTGGCACAAAGAAC
TCAAAGCTGAAACTGCTGTCGAAACGTCCGCTGCCGAGTGATTTAAAACAGGCGATTGCA
AGCCAGGAAAATGAACCTAATGCTAGTGTAAACAGCTTGGCAGGAAAACGCAAACGAAGA
AAATTGACAAAGAAGGAAAAACCATTGAAACCAGTTGCTCCTCCCCAAGAAGAAGAAACA
GAAGAATCCTCTAGTGACGATGAGGATCAGAATGTTGAAAATGATGTTTCCATGAGTGAG
CAGGATCATTCAACTGAAGATGAGAAGCAAGAAGAAAAGGTTGAAAAATCGAAAAACACT
GAAAATTCTGAAAGTGCAAAAGAGAATATGGAAATTGTAAGTGACCAAAAAAGTGAACCA
CAGTCTGTTAAAAAAGAAGTTGAGAAAACTAAAGAATCGAAACCGGTCACATTTGTGAGT
TTGGATCGCACAGCAGCCATTCAGGAAGCTCGACTGGCGTTACCAATTCTTGCAGAGGAA
CAAGTTATCATGGAGGCAATCAATGAAAACCAAGTTGTTGTTATATGCGGTGAAACTGGG
TCGGGTAAAACAACTCAAGTGCCCCAGTTCTTGTATGAGGCAGGATATGCAAGGCATGGC
ATGGTTGGAGTCACTGAACCAAGACGAGTAGCTGCAGTAAATATGTCAAAGCGAGTTGCT
GTGGAAATGAACTTACCCACCAGCAAAGTATCTTACCAAATCAGGTATGACAACAACGTC
ACAGAGGATACGTGTATAAAGTTCATGACAGACGGTGTGTTGGCTCGTGAAATGAAAGCA
GACTTCTTACTCACCAAGTATTCAGTATTAATACTTGATGAAGCTCATGAAAGAACTGCA
AATACCGATTTGTTGATTGGTTTGTTATCCAGAGTGGTTCCAATGAGAAATAAGAGAGGA
AAACCATTGAAGTTAATTATAATGTCAGCAACACTACGTGTGGAGGATTTTACAAAGAAC
GAACGTTTGTTTAAAACGCCGCCACCTGTATTGAAAATTGAGACTCGTCAGTTTCCCGTT
ACAGTTCATTTCAGTAAAAGAACTCCTCAAGAAGACACTGAAGATGGGACAAGGTTTGCG
TATCTGGATGAAGCTTATAAGAAGATTTGCAAAATCCACCGCACTTTACCAGCAGGGGGA
ATACTTGTGTTTGTGACCGGTAAACAAGAAGTTCACGCTCTGAAACGTAAACTGTCTAAC
ACTTTTCCAACTGAAATGCAACTCAATAGGCAACTGAACAACAATGAACAAATCTCAGTT
AAAGATGAGGAAAAACTCCCATCAATCAACCTGGATAAATACAAACCGACTCCGGATGAA
GACGAAGATGAAGACTTCGATGTGAAACCAACGGAGGACTTGTTGCTCTCGGAAGATGAA
GATCAATCGGACTCGGAGCTGTGGATGGATGACAGTGCGTACTCCTCAGATGCAGATCAT
ACGCTTCCAATGCGTGTCCTGCCTCTCTATGCGATGCTGCCAGCTCACAAGCAGAAACTG
GTTTTCGAGCCGGTTCCGACCGGTTTTAGGCAGTGTGTGATAGCAACTAATGTAGCTGAG
ACTTCACTCACAATTCCTGGAGTTAAATACGTCGTAGATACCGGGAAAGTTAAACGAAGA
GTTTATGACAAAACCACGGGCGTTTCTACCTTTCGAATTGGCTGGGTATCAAAAGCATCA
GCCAATCAGAGAGCTGGTAGGGCTGGCCGTACAGAAGCAGGTCACACCTACAGGTTATTC
TCATCTGCCGTTTTCCAAGATTTTGAGGATTTTGATCTGCCTGAAATTTCTTCCAAACCT
GTTGCTGGATTGGTGCTACAGATGAAGTCCATGAACATAGACCGAGTCGTCAATTTTCCC
TTCCCGACTCCCCCGTCACACAAGGCACTAGAGGGAGCTGAAGAGCTGCTGACTTCACTC
GGAGCGATCGAAAAACCCCCTCGTAATTTAACAGTGGCTGAACTTAAAAAAGTCAAGCAT
AGTGGTTCAATCAGTGAACTTGGTCGGTTAATTGCTTCATTTCCCGTCCACCCACGATAT
GGAAAAATGATTGCTGTTGCTATTAACAACGAAAGGAAACTCCTGGAATATGTTATCACT
ATTGTAGCCGCACTCACTGTGAAGGAAATGTTTGCTGTTTCTGATTTTGACGCAGAAAGA
AGCAACGGAAAGGAAAAACAAAGACATCTGGCTGCCCGCTTACAACACATGAAGGTGTTA
TGGTGTACCGGGGGTGGACCTCAACGCAGGTTACTTGGTGACCCAATGGTATACATGGGT
GCTATAGGAGCAGCTGAGTTTGCGGGTGCTACTCCATCTTATTGTGCCAACAATTGCTTA
AGACCAAAAGCAATCATTGAAGTTCGAAAACTTCGTTCCCAGCTCACCAACCTCGTAAAC
AAGATACAACCTGAGTGTGAACTTGAATTGAATCCGAAAATGAATCCACCCAACGACACA
CAGGTGAAACATTTGAGGCAAATCATATTATCGGCCATGCCTGATCGCGTGGCAAGAAGA
ATTCCAACTGATGAGTTGCCAAAAGAAGAAGCCAAGAAGTTAAAGGGAGCTTACAGATGC
GCGCTTCTTGAAAATCCTATCTTCATACATCCGGAGTCGATTCTCTCACGTGACCCACTG
CCTTTTTTCCTCGTTTTCCAGGAGGTTATGGAAACAAGAGAAGGAAAGAAGACCTATATG
AGAGATATAACTGAGATTGAACCAAACTGGCTTGCTACATTCTGTCCACAACATTGCGTA
TTCTCCAAGCCGTTGGATGACCCCATGCCGACCTATGACCCCGTGTTAGATGAGGTCAAG
TGCCACGTCACGGCAACATATGGCCGCCTTTCATGGCCATTAGGCGCAGTTGAAATACCA
TATCCTGCAGGATTGGACAGATTTCGTTGGTTCGCTCGTTTTCTTCTTGAAGGCTCCGTT
ATGACGTCATTAGGCCAATTTTCTTCTCTCTTTCTCTCCCGTCCCGCTACTATGGTCAAG
TCATGGTCAAACTTACAGCCGCGAACGGAGTCTTTATTAAAAGCCTTAGCTGGCCGTGGT
GTAGACAGCAAGAAAAAACTCACAGAAATATGGAAAGACAACCCATCATACTTGAGAGAA
GAATTATTGGAGTGGTTAGCGCCCGGATCACATCAGCACTTCTTGTCGTCGTGGCCGCTT
TCTTAGTGGAGCGGAATATTTTGGGTCCTGTTTTCTCTAGGTGTTGCATAAATCTTGGCA
ATATGGCTTAGTTTTCAATGAAGATATCAGTTTTTGTATTTTTTAAAATACGTGTAGTAT
AGGGTGGGGAAAAATGGGACACCTTTTTATTATATTTTCTCGTCTCATTTGGTCGTAAAC
AAAGAACATTCAAAGAATTATAAAATCGTATTTTCACGACTCCCATAAACCGTTGTTAAT
TGTTTAAAACACGATCAGGATATTTGGATATTATGTGCTAAAGTTGTCCTATTCTCCCCC
CACCCTACTATATTTCACATTGTACATTTCACTGCCTCAAATAAAAAGGTCAAGATCGAT
AAGTTTAA
| SMART |
Helicase_ATP-bd (IPR014001) - T[269-460] 1.2E-26 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[273-518] 9.0E-86 - T[594-865] 9.0E-86 - T[897-918] 9.0E-86 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[280-434] 1.2E-8 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[281-447] 21.298 |
| SMART |
AAA+_ATPase (IPR003593) - T[286-438] 0.0063 |
| ProSitePatterns |
DNA/RNA_helicase_DEAH_CS (IPR002464) - T[385-394] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[478-729] 12.232 |
| SMART |
Helicase_C (IPR001650) - T[593-689] 8.6E-15 |
| Pfam |
Helicase_C (IPR001650) - T[601-688] 1.2E-9 |
| SMART |
Helicase-assoc_dom (IPR007502) - T[749-876] 4.9E-20 |
| Pfam |
Helicase-assoc_dom (IPR007502) - T[750-872] 4.5E-19 |
| Pfam |
DUF1605 (IPR011709) - T[942-1034] 9.0E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DHX36_HUMAN | 26.608 % | 231 | 2.0E-62 |
| DHX37_HUMAN | 51.592 % | 956 | 0 |
| DHX40_HUMAN | 29.404 % | 314 | 1.69E-92 |