Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.872.v1.A.SL3-1

Possible name(s)

RDH12; RDH13; RDH14

Gene model

KH2012:KH.C1.872

Location

KhC1 [3,141,179 / 3,144,454]

Sequences

Amino acid sequence

Length: 251

>KH.C1.872.v1.A.SL3-1
ESRRSEKAVAETGGNEDKVILKQLDLASFASVRAFAKDVNENESRIDVLLNNAGIMMCPK
GKTEDGFETQYGVNHLGHFLLTNLLLDLVKRSAPSRIVNVSSIAHRMFSTKIDWDDMNYD
NNYSETGAYGRSKLMNILFTRELSRRLEGTNVTANSLHPGSVNTDLQRHVTGTWSLMGFF
ITPYMKLFGVTAKRGAQTNIYLSVAPELENVTGKYFTNCVQANESDQAKNDEDAKRLWEV
SLKATGLSESS

Nucleotide sequence

Length: 1,022

>KH2012:KH.C1.872.v1.A.SL3-1
AAGGACTTGCTAGTAAGCAATCATGTCGAAAAGTGTATCTCGTGGCTGGGTCAATTCTGA
TATTAAAATGATGGGGAAAACCGTCCTTATAACGGGCGCTAATACTGGAATCGGTTTGGA
AAGTGCAATCGACTTTGTAAAGCGCGAAGCAAGAGTAATTCTCGGTTGCAGAAACATTGA
GAAAGCAGAAGAAGCGAAAAAGCGGTTGCAGAAACCGGAGGTAACGAAGATAAAGTTATT
TTGAAGCAACTAGATTTGGCATCTTTCGCTTCTGTGCGCGCATTTGCAAAGGATGTGAAT
GAAAACGAAAGCAGAATCGACGTTTTGCTAAATAATGCAGGTATAATGATGTGCCCAAAA
GGCAAAACCGAAGATGGATTTGAGACTCAATATGGTGTTAACCATCTCGGCCACTTTCTG
CTTACAAATCTTTTGCTTGATCTTGTTAAGAGAAGCGCCCCAAGTCGCATCGTGAATGTA
TCTTCAATCGCCCACCGCATGTTCTCGACTAAAATTGACTGGGACGATATGAACTATGAC
AACAACTATTCTGAAACGGGGGCTTATGGCAGAAGCAAATTAATGAACATACTCTTTACA
AGGGAACTAAGCAGAAGACTGGAAGGCACAAACGTCACTGCCAACTCTCTGCACCCTGGC
TCCGTAAACACTGATCTTCAAAGACATGTAACTGGGACCTGGTCTCTAATGGGCTTTTTT
ATAACGCCTTACATGAAGCTGTTTGGTGTGACTGCTAAACGAGGTGCTCAGACAAACATC
TACCTTAGCGTTGCCCCAGAACTGGAAAATGTTACTGGGAAATACTTCACTAACTGTGTA
CAAGCAAATGAAAGCGACCAAGCGAAAAACGACGAAGACGCGAAGAGGTTGTGGGAAGTT
AGCCTCAAAGCGACCGGGTTGTCTGAATCATCATAAACAAATGCAATAATAATTATTTTC
TGTAACTTAGCGTGTTGCAATATTCTATATGTACAGTCAAATAAATATACACTTTTATTG
AG

InterProScan

Pfam	SDR_fam (IPR002347) - T[3-107] 8.4E-16
SUPERFAMILY	NAD(P)-bd_dom_sf (IPR036291) - T[5-218] 7.4E-42
PRINTS	SDR_fam (IPR002347) - T[44-55] 1.8E-7 - T[44-55] 2.4E-12 - T[89-105] 2.4E-12 - T[95-103] 1.8E-7 - T[129-148] 1.8E-7 - T[129-148] 2.4E-12 - T[150-167] 2.4E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RDH13_HUMAN	49.356 %	207	5.2E-66
RDH14_HUMAN	49.606 %	223	5.9E-72
RDH12_HUMAN	47.186 %	210	2.33E-67