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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S1598.1.v1...' > 
  2. Transcript 'Mooccu.CG.ELv1_2.S31...' > 
  3. Transcript 'Boleac.CG.SB_v3.S95....' > 
  4. Transcript 'KH2012:KH.S390.9.v1....' > 
  5. Transcript 'KH2012:KH.C1.872.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.872.v1.A.SL3-1

Possible name(s)

RDH12; RDH13; RDH14

Gene model

KH2012:KH.C1.872

Location

KhC1 [3,141,179 / 3,144,454]

Sequences

Amino acid sequence

Length: 251

>KH.C1.872.v1.A.SL3-1
ESRRSEKAVAETGGNEDKVILKQLDLASFASVRAFAKDVNENESRIDVLLNNAGIMMCPK
GKTEDGFETQYGVNHLGHFLLTNLLLDLVKRSAPSRIVNVSSIAHRMFSTKIDWDDMNYD
NNYSETGAYGRSKLMNILFTRELSRRLEGTNVTANSLHPGSVNTDLQRHVTGTWSLMGFF
ITPYMKLFGVTAKRGAQTNIYLSVAPELENVTGKYFTNCVQANESDQAKNDEDAKRLWEV
SLKATGLSESS

Nucleotide sequence

Length: 1,022

>KH2012:KH.C1.872.v1.A.SL3-1
AAGGACTTGCTAGTAAGCAATCATGTCGAAAAGTGTATCTCGTGGCTGGGTCAATTCTGA
TATTAAAATGATGGGGAAAACCGTCCTTATAACGGGCGCTAATACTGGAATCGGTTTGGA
AAGTGCAATCGACTTTGTAAAGCGCGAAGCAAGAGTAATTCTCGGTTGCAGAAACATTGA
GAAAGCAGAAGAAGCGAAAAAGCGGTTGCAGAAACCGGAGGTAACGAAGATAAAGTTATT
TTGAAGCAACTAGATTTGGCATCTTTCGCTTCTGTGCGCGCATTTGCAAAGGATGTGAAT
GAAAACGAAAGCAGAATCGACGTTTTGCTAAATAATGCAGGTATAATGATGTGCCCAAAA
GGCAAAACCGAAGATGGATTTGAGACTCAATATGGTGTTAACCATCTCGGCCACTTTCTG
CTTACAAATCTTTTGCTTGATCTTGTTAAGAGAAGCGCCCCAAGTCGCATCGTGAATGTA
TCTTCAATCGCCCACCGCATGTTCTCGACTAAAATTGACTGGGACGATATGAACTATGAC
AACAACTATTCTGAAACGGGGGCTTATGGCAGAAGCAAATTAATGAACATACTCTTTACA
AGGGAACTAAGCAGAAGACTGGAAGGCACAAACGTCACTGCCAACTCTCTGCACCCTGGC
TCCGTAAACACTGATCTTCAAAGACATGTAACTGGGACCTGGTCTCTAATGGGCTTTTTT
ATAACGCCTTACATGAAGCTGTTTGGTGTGACTGCTAAACGAGGTGCTCAGACAAACATC
TACCTTAGCGTTGCCCCAGAACTGGAAAATGTTACTGGGAAATACTTCACTAACTGTGTA
CAAGCAAATGAAAGCGACCAAGCGAAAAACGACGAAGACGCGAAGAGGTTGTGGGAAGTT
AGCCTCAAAGCGACCGGGTTGTCTGAATCATCATAAACAAATGCAATAATAATTATTTTC
TGTAACTTAGCGTGTTGCAATATTCTATATGTACAGTCAAATAAATATACACTTTTATTG
AG

InterProScan

Pfam
SDR_fam (IPR002347) - T[3-107] 8.4E-16
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[5-218] 7.4E-42
PRINTS
SDR_fam (IPR002347) - T[44-55] 1.8E-7 - T[44-55] 2.4E-12 - T[89-105] 2.4E-12 - T[95-103] 1.8E-7 - T[129-148] 1.8E-7 - T[129-148] 2.4E-12 - T[150-167] 2.4E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 49.356 % 207 5.2E-66
RDH14_HUMAN 49.606 % 223 5.9E-72
RDH12_HUMAN 47.186 % 210 2.33E-67