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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.872.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.872.v1.A.SL5-1

Possible name(s)

RDH12; RDH13; RDH14

Gene model

KH2012:KH.C1.872

Location

KhC1 [3,141,179 / 3,144,484]

Sequences

Amino acid sequence

Length: 251

>KH.C1.872.v1.A.SL5-1
ESRRSEKAVAETGGNEDKVILKQLDLASFASVRAFAKDVNENESRIDVLLNNAGIMMCPK
GKTEDGFETQYGVNHLGHFLLTNLLLDLVKRSAPSRIVNVSSIAHRMFSTKIDWDDMNYD
NNYSETGAYGRSKLMNILFTRELSRRLEGTNVTANSLHPGSVNTDLQRHVTGTWSLMGFF
ITPYMKLFGVTAKRGAQTNIYLSVAPELENVTGKYFTNCVQANESDQAKNDEDAKRLWEV
SLKATGLSESS

Nucleotide sequence

Length: 1,052

>KH2012:KH.C1.872.v1.A.SL5-1
GTGGTAAAGAACAGCGGTTTAGTGTTTTAGAAGGACTTGCTAGTAAGCAATCATGTCGAA
AAGTGTATCTCGTGGCTGGGTCAATTCTGATATTAAAATGATGGGGAAAACCGTCCTTAT
AACGGGCGCTAATACTGGAATCGGTTTGGAAAGTGCAATCGACTTTGTAAAGCGCGAAGC
AAGAGTAATTCTCGGTTGCAGAAACATTGAGAAAGCAGAAGAAGCGAAAAAGCGGTTGCA
GAAACCGGAGGTAACGAAGATAAAGTTATTTTGAAGCAACTAGATTTGGCATCTTTCGCT
TCTGTGCGCGCATTTGCAAAGGATGTGAATGAAAACGAAAGCAGAATCGACGTTTTGCTA
AATAATGCAGGTATAATGATGTGCCCAAAAGGCAAAACCGAAGATGGATTTGAGACTCAA
TATGGTGTTAACCATCTCGGCCACTTTCTGCTTACAAATCTTTTGCTTGATCTTGTTAAG
AGAAGCGCCCCAAGTCGCATCGTGAATGTATCTTCAATCGCCCACCGCATGTTCTCGACT
AAAATTGACTGGGACGATATGAACTATGACAACAACTATTCTGAAACGGGGGCTTATGGC
AGAAGCAAATTAATGAACATACTCTTTACAAGGGAACTAAGCAGAAGACTGGAAGGCACA
AACGTCACTGCCAACTCTCTGCACCCTGGCTCCGTAAACACTGATCTTCAAAGACATGTA
ACTGGGACCTGGTCTCTAATGGGCTTTTTTATAACGCCTTACATGAAGCTGTTTGGTGTG
ACTGCTAAACGAGGTGCTCAGACAAACATCTACCTTAGCGTTGCCCCAGAACTGGAAAAT
GTTACTGGGAAATACTTCACTAACTGTGTACAAGCAAATGAAAGCGACCAAGCGAAAAAC
GACGAAGACGCGAAGAGGTTGTGGGAAGTTAGCCTCAAAGCGACCGGGTTGTCTGAATCA
TCATAAACAAATGCAATAATAATTATTTTCTGTAACTTAGCGTGTTGCAATATTCTATAT
GTACAGTCAAATAAATATACACTTTTATTGAG

InterProScan

Pfam
SDR_fam (IPR002347) - T[3-107] 8.4E-16
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[5-218] 7.4E-42
PRINTS
SDR_fam (IPR002347) - T[44-55] 1.8E-7 - T[44-55] 2.4E-12 - T[89-105] 2.4E-12 - T[95-103] 1.8E-7 - T[129-148] 1.8E-7 - T[129-148] 2.4E-12 - T[150-167] 2.4E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH13_HUMAN 49.356 % 207 5.2E-66
RDH14_HUMAN 49.606 % 223 5.9E-72
RDH12_HUMAN 47.186 % 210 2.33E-67





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