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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S1...'
  2. Transcript 'Phfumi.CG.MTP2014.S1...'
  3. Transcript 'KH2012:KH.C1.931.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.931.v1.A.SL1-1

Possible name(s)

GREB1; GREB1L

Location

KhC1 [5,430,319 / 5,451,322]

Sequences

Amino acid sequence

Length: 1,762

>KH.C1.931.v1.A.SL1-1
TGKECMSVETLMRSKNLLPVQVIASVPSNPMGSSQSGQKAAFEEALHNSIESSLRSVAVA
PSSVFSTLFLSLRPASVVNKDETADIKPNSEQLNEELNKQNASRQESTNEPQNSLLAAKF
PHTNQSPLNSSNPSILSLQSGTSPTPVCRPPALIPASHVRHTNFPHNVATSTSLPPVPRP
PMTLMAQQQQQLEARVEQLKQLQRLHAWKQLHKDKPLHVMPGSEMSASGNNQQSNLPAVL
GGSGMSVQPPAPIVLPSNSINGMYSNGNFHGTRITGSKLPKGFCKSGKDIRLTTLENDSS
FMVPCPNEYVLLALQTSASSSSDNLVIIAINLKSLPPPNSSSQALSVQCVGCGEKAIHTF
IQLVEHVGLDYSEVANAHLKTNSSHLIGAHARFYLVRDRNNARHLIRGPALMWNKQLEAG
RVRSSIPVPRFSVMQNPMFRNQNTMLPTPTHFTSPKSSHPPLVQSLSGPTYSRGIYPLKR
KASSINQESSIEIFEDEPRRYTLNKEDASSDIVIPEDLALTLQRKLIIMLLHPLNQQPRL
SGDVASVVVTSRFSECLGKNNEPDVSNLRPFNFNLMLLVTVQYLVSLGTGSIISSEGFSH
AALQARKHVEMHPHLNDQTPTNIVALAALAAAASEGRVEFVVGKVSLADIMSQCIVNAPT
SSAIYQVVACLSDHQTDNISFHILVTGMKQCRVTSESLLSPSEHSSQISQGLISLPFTQL
RLSLSEVTTPLIKPSPTSPTSYTARITELATPSLKCSVLEQYQNKVASLLLAKVHSIYAS
EKHPDISHFTSLRFIFLLPPSPCSYKTAVNQISNSGVLSLLYKTSLPVTSLSSQVVIPVE
PSSKQRVLSMCKQWEGSSTLLVLVDLDSSANQQSSEGASVLNHPCIVNLSNVLVIQCSTV
PYLLLTNSSRVPPSNQVFHSSATATSNKQITVPNTSLFYFGTTASCSTNPPRITYDLDFE
NLKDNLLLSHHPLHTSLVACELIIQHYITALIIAFSEESERRKLRMDLTSVYSALTERIV
EVNLRMAFEDGNRLTRSKLEMELSLAASVCHPNLQTKTFKSDPDDDGNNLHVIESDDAQS
DKDGEGKTSGWESKEETQFDSRLEPLKRKRPRMDCVESDFISAAMRDANLQTTDNGKETK
CNPVAPKVVLPKRIYDILKSNNEVIRTTTTQATHSMKMRTRSVKLILIVSSSQLPQTQIP
SSSAMLEIEVYDDVEDRPMISREATFHTLLGNPVSTERSQITNSCYDLQQLHVRKPSVVG
NNRKVVTISSNNNHAFNVRRGKENVTLDDTENSSSSTYEVNLAPSASWSYKGSLNLRLII
PVKSRSLFNFIKCEDGSHKLRSIRLREQSYDGLKTPIVSFGNNGAAEGLYNLRGTLDTNN
DDVNHLHMVVVKECDEFSYTKLLPNHVLLVLPQDFDVLGRGAMKFAAQALFTHFYDVSIG
DEASDTVWPFVMMMNDDCVAWSSWKPSEERISNLADEWSDISLKELLENVESSLTSEVAA
VGFRPWSTDLTRPNSAENLVDKNSKFFGAFILILLKKQDAEICYYAYMFNWEDLDWSLRL
AAAGLPVQRFENIALCTKVMPAVKSHEILNSEESVLVTAADSEFVPFSFHPSLLLEKHFN
KNAASVFPLSQSNPLNPVLCIDCYISLGTDVCILTSIFCVQHLMYMCYWALDYNKLYGGL
LLYCPASTVTFDFLLKYQFAEGATVCVIGHDRSSLRQTVVKLNLESEWHFRLTDEFLTAN
HTVLSGSNVRPLYFLTGMHKNP

Nucleotide sequence

Length: 6,257

>KH2012:KH.C1.931.v1.A.SL1-1
GGCTGAAACCACATGAGCAGTTTCTACACTCTTTGTAACTAGTTAAATTTCTGCTATAGT
TTACACACCACTATAAACTGGCAAGGAATGTATGTCTGTAGAAACACTCATGCGTTCCAA
GAATCTCCTGCCTGTTCAGGTAATTGCATCTGTGCCATCTAACCCGATGGGGAGCAGTCA
ATCTGGACAGAAGGCAGCATTTGAGGAAGCTTTACACAACAGCATAGAAAGCTCATTGCG
TTCTGTAGCTGTTGCTCCAAGCTCTGTATTTTCTACTTTGTTTCTCAGCCTTCGACCAGC
TTCTGTGGTTAATAAAGATGAAACAGCTGATATAAAGCCAAACTCTGAACAACTAAATGA
AGAGTTAAACAAACAAAACGCAAGTCGACAAGAAAGTACCAATGAACCACAAAACTCTTT
GCTGGCAGCCAAGTTCCCTCATACCAACCAATCCCCTCTTAACTCCTCAAACCCATCAAT
TCTTTCATTGCAAAGTGGTACTTCACCTACTCCTGTATGTCGACCTCCTGCCCTTATCCC
TGCAAGCCATGTTCGACACACAAACTTTCCTCACAATGTAGCCACCTCAACCTCATTGCC
CCCAGTACCCCGTCCCCCTATGACATTGATGGCACAACAGCAACAACAACTTGAGGCACG
GGTAGAACAGTTGAAACAACTTCAACGGCTCCATGCATGGAAACAACTTCATAAGGATAA
GCCTCTACATGTAATGCCTGGGTCAGAGATGAGTGCAAGCGGCAACAATCAACAATCTAA
CCTACCAGCAGTACTTGGGGGAAGTGGCATGTCAGTCCAACCACCAGCTCCTATTGTGTT
GCCGTCGAATTCAATAAACGGAATGTATTCAAACGGAAACTTCCACGGAACTCGTATCAC
TGGAAGCAAGCTTCCAAAAGGATTTTGCAAGAGTGGGAAGGATATTAGATTGACAACGCT
GGAAAATGATTCCAGTTTCATGGTACCATGCCCAAATGAGTATGTCCTCCTTGCTCTGCA
GACTTCTGCTAGCTCTTCCTCTGACAACCTCGTCATTATTGCAATAAACCTGAAATCCTT
GCCTCCTCCAAACAGTTCTTCCCAAGCCTTGTCAGTGCAATGCGTTGGTTGTGGGGAGAA
GGCAATACACACATTCATACAACTAGTCGAACACGTGGGCCTTGATTATTCGGAAGTGGC
CAATGCACATCTAAAAACCAACTCAAGTCACCTCATAGGAGCACATGCACGATTTTACCT
TGTGAGAGATAGAAATAATGCAAGACACCTCATTAGAGGACCTGCACTGATGTGGAATAA
ACAACTTGAAGCTGGAAGAGTAAGGAGCAGCATTCCCGTTCCTCGCTTCTCTGTGATGCA
GAATCCGATGTTTAGGAACCAGAACACCATGCTTCCAACCCCCACTCACTTCACGTCACC
CAAATCCTCTCACCCACCCTTGGTTCAGTCGTTATCTGGCCCCACATATTCAAGGGGAAT
ATACCCGCTCAAAAGAAAAGCATCCAGCATAAATCAAGAAAGTAGTATTGAAATATTTGA
AGATGAGCCAAGAAGATACACTCTCAACAAAGAAGATGCTTCATCCGATATTGTGATCCC
GGAGGACCTGGCACTGACTCTGCAAAGAAAACTGATCATTATGTTACTTCATCCTCTGAA
CCAGCAGCCGAGGTTAAGCGGGGACGTAGCAAGCGTGGTTGTCACATCCAGGTTCTCAGA
ATGTTTAGGCAAAAATAATGAACCGGATGTTTCCAATCTACGTCCATTCAACTTTAATCT
CATGCTACTTGTTACAGTGCAGTACCTAGTCTCACTGGGGACTGGTAGCATTATCAGTAG
TGAAGGTTTTAGCCATGCAGCACTGCAAGCAAGGAAGCATGTAGAAATGCATCCTCACTT
AAATGATCAAACACCAACAAATATTGTTGCATTGGCAGCACTAGCAGCAGCTGCATCAGA
AGGCAGGGTGGAATTTGTTGTGGGAAAGGTATCCCTTGCTGACATCATGTCCCAGTGTAT
TGTTAATGCGCCAACGTCATCTGCAATTTACCAAGTTGTGGCATGTCTTTCTGATCATCA
AACGGACAACATTTCATTTCACATACTTGTAACAGGAATGAAACAGTGTCGAGTTACGAG
TGAGAGTCTCCTTTCACCATCAGAGCATTCATCCCAAATCAGTCAGGGCCTCATCTCTCT
CCCTTTTACACAACTAAGACTATCATTGTCAGAAGTTACAACACCCCTAATAAAACCTTC
ACCTACCTCTCCCACCTCATACACTGCAAGGATCACGGAGTTAGCAACACCATCCTTAAA
ATGTTCCGTCCTTGAGCAATATCAGAACAAGGTTGCTTCATTGTTGCTGGCCAAGGTTCA
CTCAATATACGCAAGTGAGAAACACCCAGATATATCACACTTCACCTCACTACGTTTCAT
ATTTCTTCTACCTCCGTCACCATGCTCATACAAGACAGCTGTCAATCAAATATCAAACTC
AGGTGTTCTAAGTTTACTTTACAAAACCTCACTTCCCGTCACCTCTCTATCCTCGCAAGT
TGTTATTCCAGTCGAACCATCCTCAAAACAAAGAGTCTTATCAATGTGTAAGCAGTGGGA
AGGTTCATCCACCCTTCTGGTATTGGTTGATTTAGACTCAAGTGCCAACCAACAAAGCTC
TGAGGGTGCCAGTGTACTCAACCATCCTTGTATTGTGAACTTATCAAACGTACTAGTGAT
TCAATGCTCAACCGTGCCTTACTTGCTCCTCACTAACAGTTCAAGAGTGCCTCCATCGAA
CCAAGTGTTTCATTCTTCAGCAACTGCTACCTCAAATAAACAGATAACTGTTCCAAATAC
CTCATTATTTTACTTTGGTACTACTGCAAGCTGTTCAACTAACCCACCCCGCATCACATA
TGACCTCGATTTTGAAAACCTCAAAGACAATTTGCTGCTTAGCCATCATCCCTTGCATAC
GTCACTCGTGGCATGCGAGCTCATCATACAACATTACATTACTGCTCTTATCATCGCATT
TTCGGAAGAAAGCGAGCGAAGGAAGCTGAGAATGGATCTTACTTCAGTTTATTCTGCGCT
CACCGAACGCATTGTTGAGGTGAACCTTCGTATGGCTTTTGAAGACGGAAATCGCTTGAC
GAGGTCTAAGCTGGAAATGGAACTCTCCCTCGCTGCCAGCGTGTGCCATCCTAACCTGCA
AACAAAAACCTTCAAATCTGATCCTGACGATGATGGTAACAACCTTCATGTTATAGAATC
TGATGATGCTCAGTCTGATAAGGATGGAGAAGGAAAAACGAGTGGCTGGGAGTCAAAAGA
AGAAACACAGTTTGATTCAAGGTTGGAGCCGTTGAAACGGAAGCGACCTCGCATGGATTG
TGTGGAGTCCGATTTCATCAGTGCTGCAATGCGTGATGCGAATCTTCAAACAACCGACAA
CGGAAAGGAAACGAAATGCAATCCCGTGGCACCAAAAGTGGTTCTACCAAAACGAATTTA
TGATATACTAAAGTCCAATAATGAGGTCATCCGGACTACAACGACTCAAGCGACACACTC
GATGAAAATGAGAACCAGATCAGTCAAATTGATCCTTATCGTGTCCTCCTCACAACTCCC
CCAAACTCAAATCCCGTCTTCATCTGCTATGCTTGAAATTGAAGTATACGATGATGTTGA
AGATAGACCTATGATATCACGTGAAGCAACATTTCACACGTTGCTAGGCAACCCTGTGAG
TACGGAAAGGAGTCAAATCACTAACTCATGTTATGACTTACAACAACTTCATGTTAGAAA
GCCCTCTGTTGTTGGTAATAATAGGAAGGTGGTGACCATATCAAGCAACAATAATCATGC
GTTCAATGTAAGGCGAGGGAAGGAGAATGTTACATTGGACGACACAGAGAACTCTTCTTC
TTCCACTTATGAAGTTAATCTTGCTCCCTCTGCTTCTTGGAGCTACAAAGGATCATTAAA
CCTTCGTCTTATCATCCCTGTGAAGAGCAGATCACTTTTTAACTTCATTAAATGTGAAGA
CGGATCACACAAACTCAGATCTATCAGACTGAGGGAACAGTCATATGATGGACTCAAGAC
GCCCATTGTAAGTTTTGGCAATAATGGGGCAGCTGAGGGGTTGTATAACTTACGTGGCAC
CCTTGACACCAATAATGACGATGTCAACCACCTTCATATGGTGGTAGTCAAGGAATGCGA
CGAGTTCTCCTACACAAAGTTGCTGCCCAACCATGTACTGCTCGTCTTGCCTCAAGACTT
TGATGTATTGGGCAGAGGTGCAATGAAGTTTGCTGCCCAAGCTCTCTTCACTCACTTCTA
TGATGTTTCTATCGGAGATGAGGCTAGTGACACCGTGTGGCCGTTTGTGATGATGATGAA
CGATGATTGCGTTGCGTGGTCGTCATGGAAACCAAGCGAGGAACGCATTTCAAACCTGGC
GGACGAATGGAGTGACATATCACTGAAAGAGCTTCTAGAAAACGTGGAGTCTTCGTTAAC
ATCGGAAGTTGCAGCTGTTGGATTCCGTCCGTGGTCGACCGACCTCACCCGACCAAACTC
TGCCGAAAACTTGGTAGATAAAAATTCCAAATTTTTTGGGGCATTTATATTAATTTTGTT
AAAAAAGCAAGACGCTGAAATTTGTTACTATGCTTATATGTTTAACTGGGAAGACCTGGA
CTGGTCCCTTCGACTAGCAGCTGCGGGACTTCCGGTACAGAGGTTTGAAAACATCGCTCT
GTGCACAAAAGTCATGCCAGCAGTGAAATCCCACGAAATATTAAACTCCGAGGAAAGTGT
GTTGGTAACGGCGGCAGATTCCGAGTTTGTTCCTTTCTCCTTCCACCCAAGCCTGCTGCT
GGAGAAACACTTTAACAAGAACGCTGCGTCAGTTTTCCCACTTTCACAGTCCAACCCCTT
AAACCCAGTACTGTGCATTGACTGTTATATCAGCCTTGGAACTGACGTATGTATTCTTAC
ATCGATATTTTGTGTACAACACCTAATGTACATGTGTTATTGGGCACTGGATTATAATAA
ATTGTACGGCGGGTTATTGCTGTACTGCCCTGCTTCCACCGTCACATTTGATTTCTTACT
TAAGTATCAGTTTGCTGAAGGCGCCACCGTGTGCGTGATCGGACACGACCGTAGTTCGTT
GCGCCAGACAGTGGTGAAACTGAACCTGGAAAGTGAATGGCATTTCCGTCTCACTGACGA
ATTTCTGACTGCCAACCATACTGTGCTCTCTGGCTCCAACGTGCGGCCACTTTATTTCCT
TACAGGTATGCACAAGAACCCATGATCAGCCACGACAATCAACTCATCATCAATCTCTCA
GTTTTAGTCACGGGTCTTGTTAAGGCCACATCGAATACTTTTTTTAGGCTTTTTACGTTT
TATTTGTACATACCACCTCCGGAAATGAGTTTTGCCTCGCCACATTGATCGGAATGCGTT
GTAAGCCAATATTGTGACCTCAATCTCCGACGTCCTATGCACTCAGACGATTTTCCGTTT
GCAAGCCATCGGACGATCACCACGGAACATTACACGCTGTTCCACTTAATCTACTTCATT
GTGACGTAATAATCAGGATTTGTGTCTTGTCGTATACCTCCACAACTAATCTCAACTTCT
TCAATGTCGTCTTCAAATCAAAATGTTCCAAAACTTTACAAAACCCCTCTCTTGGTCTTC
AATCAATGTTTGTTATTGTAACACCTCCTTATCGTGTACTACCCAACCCCGTACCTCACT
TCACAGCGTTTTTCAACGCGTCATCATTTAAACAGCGTTTATTATATACTTTGTACTTTC
CAAACCGCCGCAAAAGAAACCGATTTTTTGCCGGGGTTCCATTTTTTTCATTGGAACGCT
ACCTGTAAACCTGATCCGAGTTACTAAATGTCCAATTTATAACCAACAGTACCTTGATAA
ACCAGGTGCATACATGGCCTACCCTCAAATATTGTGAATATTATTTGTCGTACTAACCCG
TTATATTTACTTGAATCCGCATGCACAGCATTCCATTGTGTCCAAGCTCCTCATGCACCT
ACCTCGTTTTTGTTTGCTTCCAGCTACTCAGGATCGTTAGCTCCACCCCATGACCGTGGT
CCGATGTTTTCTTGTGATTTTGAGAAACAATGTGTGAAACGCGTAACCTCTGCGAATATT
ACAAAGAGTTGAAAATC

InterProScan

Pfam
GREB1 (IPR028422) - T[31-105] 1.4E-9 - T[279-424] 1.2E-12 - T[506-999] 1.0E-35 - T[1262-1759] 3.2E-76
PANTHER
GREB1 (IPR028422) - T[31-107] 8.9E-204 - T[281-1003] 8.9E-204 - T[1032-1194] 8.9E-204 - T[1313-1760] 8.9E-204

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GREB1_HUMAN 33.019 % 201 1.06E-51
GRB1L_HUMAN 32.03 % 211 1.11E-54