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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S75...'
  2. Clone 'cign065d05'
  3. Clone 'cieg022j17'
  4. Transcript 'KH2012:KH.C12.200.v1...'
  5. Transcript 'KH2012:KH.C1.931.v2....'

Transcript Model

Transcript Id

KH2012:KH.C1.931.v2.A.SL2-1

Possible name(s)

GREB1; GREB1L

Location

KhC1 [5,430,319 / 5,450,757]

Sequences

Amino acid sequence

Length: 1,680

>KH.C1.931.v2.A.SL2-1
LLDIKPNSEQLNEELNKQNASRQESTNEPQNSLLAAKFPHTNQSPLNSSNPSILSLQSGT
SPTPVCRPPALIPASHVRHTNFPHNVATSTSLPPVPRPPMTLMAQQQQQLEARVEQLKQL
QRLHAWKQLHKDKPLHVMPGSEMSASGNNQQSNLPAVLGGSGMSVQPPAPIVLPSNSING
MYSNGNFHGTRITGSKLPKGFCKSGKDIRLTTLENDSSFMVPCPNEYVLLALQTSASSSS
DNLVIIAINLKSLPPPNSSSQALSVQCVGCGEKAIHTFIQLVEHVGLDYSEVANAHLKTN
SSHLIGAHARFYLVRDRNNARHLIRGPALMWNKQLEAGRVRSSIPVPRFSVMQNPMFRNQ
NTMLPTPTHFTSPKSSHPPLVQSLSGPTYSRGIYPLKRKASSINQESSIEIFEDEPRRYT
LNKEDASSDIVIPEDLALTLQRKLIIMLLHPLNQQPRLSGDVASVVVTSRFSECLGKNNE
PDVSNLRPFNFNLMLLVTVQYLVSLGTGSIISSEGFSHAALQARKHVEMHPHLNDQTPTN
IVALAALAAAASEGRVEFVVGKVSLADIMSQCIVNAPTSSAIYQVVACLSDHQTDNISFH
ILVTGMKQCRVTSESLLSPSEHSSQISQGLISLPFTQLRLSLSEVTTPLIKPSPTSPTSY
TARITELATPSLKCSVLEQYQNKVASLLLAKVHSIYASEKHPDISHFTSLRFIFLLPPSP
CSYKTAVNQISNSGVLSLLYKTSLPVTSLSSQVVIPVEPSSKQRVLSMCKQWEGSSTLLV
LVDLDSSANQQSSEGASVLNHPCIVNLSNVLVIQCSTVPYLLLTNSSRVPPSNQVFHSSA
TATSNKQITVPNTSLFYFGTTASCSTNPPRITYDLDFENLKDNLLLSHHPLHTSLVACEL
IIQHYITALIIAFSEESERRKLRMDLTSVYSALTERIVEVNLRMAFEDGNRLTRSKLEME
LSLAASVCHPNLQTKTFKSDPDDDGNNLHVIESDDAQSDKDGEGKTSGWESKEETQFDSR
LEPLKRKRPRMDCVESDFISAAMRDANLQTTDNGKETKCNPVAPKVVLPKRIYDILKSNN
EVIRTTTTQATHSMKMRTRSVKLILIVSSSQLPQTQIPSSSAMLEIEVYDDVEDRPMISR
EATFHTLLGNPVSTERSQITNSCYDLQQLHVRKPSVVGNNRKVVTISSNNNHAFNVRRGK
ENVTLDDTENSSSSTYEVNLAPSASWSYKGSLNLRLIIPVKSRSLFNFIKCEDGSHKLRS
IRLREQSYDGLKTPIVSFGNNGAAEGLYNLRGTLDTNNDDVNHLHMVVVKECDEFSYTKL
LPNHVLLVLPQDFDVLGRGAMKFAAQALFTHFYDVSIGDEASDTVWPFVMMMNDDCVAWS
SWKPSEERISNLADEWSDISLKELLENVESSLTSEVAAVGFRPWSTDLTRPNSAENLVDK
NSKFFGAFILILLKKQDAEICYYAYMFNWEDLDWSLRLAAAGLPVQRFENIALCTKVMPA
VKSHEILNSEESVLVTAADSEFVPFSFHPSLLLEKHFNKNAASVFPLSQSNPLNPVLCID
CYISLGTDVCILTSIFCVQHLMYMCYWALDYNKLYGGLLLYCPASTVTFDFLLKYQFAEG
ATVCVIGHDRSSLRQTVVKLNLESEWHFRLTDEFLTANHTVLSGSNVRPLYFLTGMHKNP

Nucleotide sequence

Length: 5,985

>KH2012:KH.C1.931.v2.A.SL2-1
ATGTGTTTAATGTAGCACATTAGATGGTTTGTAATTAGTCTGTTTTATAACTATTAGATA
TAAAGCCAAACTCTGAACAACTAAATGAAGAGTTAAACAAACAAAACGCAAGTCGACAAG
AAAGTACCAATGAACCACAAAACTCTTTGCTGGCAGCCAAGTTCCCTCATACCAACCAAT
CCCCTCTTAACTCCTCAAACCCATCAATTCTTTCATTGCAAAGTGGTACTTCACCTACTC
CTGTATGTCGACCTCCTGCCCTTATCCCTGCAAGCCATGTTCGACACACAAACTTTCCTC
ACAATGTAGCCACCTCAACCTCATTGCCCCCAGTACCCCGTCCCCCTATGACATTGATGG
CACAACAGCAACAACAACTTGAGGCACGGGTAGAACAGTTGAAACAACTTCAACGGCTCC
ATGCATGGAAACAACTTCATAAGGATAAGCCTCTACATGTAATGCCTGGGTCAGAGATGA
GTGCAAGCGGCAACAATCAACAATCTAACCTACCAGCAGTACTTGGGGGAAGTGGCATGT
CAGTCCAACCACCAGCTCCTATTGTGTTGCCGTCGAATTCAATAAACGGAATGTATTCAA
ACGGAAACTTCCACGGAACTCGTATCACTGGAAGCAAGCTTCCAAAAGGATTTTGCAAGA
GTGGGAAGGATATTAGATTGACAACGCTGGAAAATGATTCCAGTTTCATGGTACCATGCC
CAAATGAGTATGTCCTCCTTGCTCTGCAGACTTCTGCTAGCTCTTCCTCTGACAACCTCG
TCATTATTGCAATAAACCTGAAATCCTTGCCTCCTCCAAACAGTTCTTCCCAAGCCTTGT
CAGTGCAATGCGTTGGTTGTGGGGAGAAGGCAATACACACATTCATACAACTAGTCGAAC
ACGTGGGCCTTGATTATTCGGAAGTGGCCAATGCACATCTAAAAACCAACTCAAGTCACC
TCATAGGAGCACATGCACGATTTTACCTTGTGAGAGATAGAAATAATGCAAGACACCTCA
TTAGAGGACCTGCACTGATGTGGAATAAACAACTTGAAGCTGGAAGAGTAAGGAGCAGCA
TTCCCGTTCCTCGCTTCTCTGTGATGCAGAATCCGATGTTTAGGAACCAGAACACCATGC
TTCCAACCCCCACTCACTTCACGTCACCCAAATCCTCTCACCCACCCTTGGTTCAGTCGT
TATCTGGCCCCACATATTCAAGGGGAATATACCCGCTCAAAAGAAAAGCATCCAGCATAA
ATCAAGAAAGTAGTATTGAAATATTTGAAGATGAGCCAAGAAGATACACTCTCAACAAAG
AAGATGCTTCATCCGATATTGTGATCCCGGAGGACCTGGCACTGACTCTGCAAAGAAAAC
TGATCATTATGTTACTTCATCCTCTGAACCAGCAGCCGAGGTTAAGCGGGGACGTAGCAA
GCGTGGTTGTCACATCCAGGTTCTCAGAATGTTTAGGCAAAAATAATGAACCGGATGTTT
CCAATCTACGTCCATTCAACTTTAATCTCATGCTACTTGTTACAGTGCAGTACCTAGTCT
CACTGGGGACTGGTAGCATTATCAGTAGTGAAGGTTTTAGCCATGCAGCACTGCAAGCAA
GGAAGCATGTAGAAATGCATCCTCACTTAAATGATCAAACACCAACAAATATTGTTGCAT
TGGCAGCACTAGCAGCAGCTGCATCAGAAGGCAGGGTGGAATTTGTTGTGGGAAAGGTAT
CCCTTGCTGACATCATGTCCCAGTGTATTGTTAATGCGCCAACGTCATCTGCAATTTACC
AAGTTGTGGCATGTCTTTCTGATCATCAAACGGACAACATTTCATTTCACATACTTGTAA
CAGGAATGAAACAGTGTCGAGTTACGAGTGAGAGTCTCCTTTCACCATCAGAGCATTCAT
CCCAAATCAGTCAGGGCCTCATCTCTCTCCCTTTTACACAACTAAGACTATCATTGTCAG
AAGTTACAACACCCCTAATAAAACCTTCACCTACCTCTCCCACCTCATACACTGCAAGGA
TCACGGAGTTAGCAACACCATCCTTAAAATGTTCCGTCCTTGAGCAATATCAGAACAAGG
TTGCTTCATTGTTGCTGGCCAAGGTTCACTCAATATACGCAAGTGAGAAACACCCAGATA
TATCACACTTCACCTCACTACGTTTCATATTTCTTCTACCTCCGTCACCATGCTCATACA
AGACAGCTGTCAATCAAATATCAAACTCAGGTGTTCTAAGTTTACTTTACAAAACCTCAC
TTCCCGTCACCTCTCTATCCTCGCAAGTTGTTATTCCAGTCGAACCATCCTCAAAACAAA
GAGTCTTATCAATGTGTAAGCAGTGGGAAGGTTCATCCACCCTTCTGGTATTGGTTGATT
TAGACTCAAGTGCCAACCAACAAAGCTCTGAGGGTGCCAGTGTACTCAACCATCCTTGTA
TTGTGAACTTATCAAACGTACTAGTGATTCAATGCTCAACCGTGCCTTACTTGCTCCTCA
CTAACAGTTCAAGAGTGCCTCCATCGAACCAAGTGTTTCATTCTTCAGCAACTGCTACCT
CAAATAAACAGATAACTGTTCCAAATACCTCATTATTTTACTTTGGTACTACTGCAAGCT
GTTCAACTAACCCACCCCGCATCACATATGACCTCGATTTTGAAAACCTCAAAGACAATT
TGCTGCTTAGCCATCATCCCTTGCATACGTCACTCGTGGCATGCGAGCTCATCATACAAC
ATTACATTACTGCTCTTATCATCGCATTTTCGGAAGAAAGCGAGCGAAGGAAGCTGAGAA
TGGATCTTACTTCAGTTTATTCTGCGCTCACCGAACGCATTGTTGAGGTGAACCTTCGTA
TGGCTTTTGAAGACGGAAATCGCTTGACGAGGTCTAAGCTGGAAATGGAACTCTCCCTCG
CTGCCAGCGTGTGCCATCCTAACCTGCAAACAAAAACCTTCAAATCTGATCCTGACGATG
ATGGTAACAACCTTCATGTTATAGAATCTGATGATGCTCAGTCTGATAAGGATGGAGAAG
GAAAAACGAGTGGCTGGGAGTCAAAAGAAGAAACACAGTTTGATTCAAGGTTGGAGCCGT
TGAAACGGAAGCGACCTCGCATGGATTGTGTGGAGTCCGATTTCATCAGTGCTGCAATGC
GTGATGCGAATCTTCAAACAACCGACAACGGAAAGGAAACGAAATGCAATCCCGTGGCAC
CAAAAGTGGTTCTACCAAAACGAATTTATGATATACTAAAGTCCAATAATGAGGTCATCC
GGACTACAACGACTCAAGCGACACACTCGATGAAAATGAGAACCAGATCAGTCAAATTGA
TCCTTATCGTGTCCTCCTCACAACTCCCCCAAACTCAAATCCCGTCTTCATCTGCTATGC
TTGAAATTGAAGTATACGATGATGTTGAAGATAGACCTATGATATCACGTGAAGCAACAT
TTCACACGTTGCTAGGCAACCCTGTGAGTACGGAAAGGAGTCAAATCACTAACTCATGTT
ATGACTTACAACAACTTCATGTTAGAAAGCCCTCTGTTGTTGGTAATAATAGGAAGGTGG
TGACCATATCAAGCAACAATAATCATGCGTTCAATGTAAGGCGAGGGAAGGAGAATGTTA
CATTGGACGACACAGAGAACTCTTCTTCTTCCACTTATGAAGTTAATCTTGCTCCCTCTG
CTTCTTGGAGCTACAAAGGATCATTAAACCTTCGTCTTATCATCCCTGTGAAGAGCAGAT
CACTTTTTAACTTCATTAAATGTGAAGACGGATCACACAAACTCAGATCTATCAGACTGA
GGGAACAGTCATATGATGGACTCAAGACGCCCATTGTAAGTTTTGGCAATAATGGGGCAG
CTGAGGGGTTGTATAACTTACGTGGCACCCTTGACACCAATAATGACGATGTCAACCACC
TTCATATGGTGGTAGTCAAGGAATGCGACGAGTTCTCCTACACAAAGTTGCTGCCCAACC
ATGTACTGCTCGTCTTGCCTCAAGACTTTGATGTATTGGGCAGAGGTGCAATGAAGTTTG
CTGCCCAAGCTCTCTTCACTCACTTCTATGATGTTTCTATCGGAGATGAGGCTAGTGACA
CCGTGTGGCCGTTTGTGATGATGATGAACGATGATTGCGTTGCGTGGTCGTCATGGAAAC
CAAGCGAGGAACGCATTTCAAACCTGGCGGACGAATGGAGTGACATATCACTGAAAGAGC
TTCTAGAAAACGTGGAGTCTTCGTTAACATCGGAAGTTGCAGCTGTTGGATTCCGTCCGT
GGTCGACCGACCTCACCCGACCAAACTCTGCCGAAAACTTGGTAGATAAAAATTCCAAAT
TTTTTGGGGCATTTATATTAATTTTGTTAAAAAAGCAAGACGCTGAAATTTGTTACTATG
CTTATATGTTTAACTGGGAAGACCTGGACTGGTCCCTTCGACTAGCAGCTGCGGGACTTC
CGGTACAGAGGTTTGAAAACATCGCTCTGTGCACAAAAGTCATGCCAGCAGTGAAATCCC
ACGAAATATTAAACTCCGAGGAAAGTGTGTTGGTAACGGCGGCAGATTCCGAGTTTGTTC
CTTTCTCCTTCCACCCAAGCCTGCTGCTGGAGAAACACTTTAACAAGAACGCTGCGTCAG
TTTTCCCACTTTCACAGTCCAACCCCTTAAACCCAGTACTGTGCATTGACTGTTATATCA
GCCTTGGAACTGACGTATGTATTCTTACATCGATATTTTGTGTACAACACCTAATGTACA
TGTGTTATTGGGCACTGGATTATAATAAATTGTACGGCGGGTTATTGCTGTACTGCCCTG
CTTCCACCGTCACATTTGATTTCTTACTTAAGTATCAGTTTGCTGAAGGCGCCACCGTGT
GCGTGATCGGACACGACCGTAGTTCGTTGCGCCAGACAGTGGTGAAACTGAACCTGGAAA
GTGAATGGCATTTCCGTCTCACTGACGAATTTCTGACTGCCAACCATACTGTGCTCTCTG
GCTCCAACGTGCGGCCACTTTATTTCCTTACAGGTATGCACAAGAACCCATGATCAGCCA
CGACAATCAACTCATCATCAATCTCTCAGTTTTAGTCACGGGTCTTGTTAAGGCCACATC
GAATACTTTTTTTAGGCTTTTTACGTTTTATTTGTACATACCACCTCCGGAAATGAGTTT
TGCCTCGCCACATTGATCGGAATGCGTTGTAAGCCAATATTGTGACCTCAATCTCCGACG
TCCTATGCACTCAGACGATTTTCCGTTTGCAAGCCATCGGACGATCACCACGGAACATTA
CACGCTGTTCCACTTAATCTACTTCATTGTGACGTAATAATCAGGATTTGTGTCTTGTCG
TATACCTCCACAACTAATCTCAACTTCTTCAATGTCGTCTTCAAATCAAAATGTTCCAAA
ACTTTACAAAACCCCTCTCTTGGTCTTCAATCAATGTTTGTTATTGTAACACCTCCTTAT
CGTGTACTACCCAACCCCGTACCTCACTTCACAGCGTTTTTCAACGCGTCATCATTTAAA
CAGCGTTTATTATATACTTTGTACTTTCCAAACCGCCGCAAAAGAAACCGATTTTTTGCC
GGGGTTCCATTTTTTTCATTGGAACGCTACCTGTAAACCTGATCCGAGTTACTAAATGTC
CAATTTATAACCAACAGTACCTTGATAAACCAGGTGCATACATGGCCTACCCTCAAATAT
TGTGAATATTATTTGTCGTACTAACCCGTTATATTTACTTGAATCCGCATGCACAGCATT
CCATTGTGTCCAAGCTCCTCATGCACCTACCTCGTTTTTGTTTGCTTCCAGCTACTCAGG
ATCGTTAGCTCCACCCCATGACCGTGGTCCGATGTTTTCTTGTGATTTTGAGAAACAATG
TGTGAAACGCGTAACCTCTGCGAATATTACAAAGAGTTGAAAATC

InterProScan

Pfam
GREB1 (IPR028422) - T[197-342] 1.0E-12 - T[423-918] 8.9E-36 - T[1180-1677] 2.9E-76
PANTHER
GREB1 (IPR028422) - T[199-921] 1.8E-198 - T[949-1112] 1.8E-198 - T[1231-1678] 1.8E-198

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GREB1_HUMAN 33.019 % 201 1.34E-51
GRB1L_HUMAN 32.03 % 210 1.34E-54