Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.940.v1.A.SL2-1

Possible name(s)

YRDC

Gene model

KH2012:KH.C1.940

Location

KhC1 [7,814,732 / 7,816,147]

Sequences

Amino acid sequence

Length: 295

>KH.C1.940.v1.A.SL2-1
FKMSTTINCYSSSENESFNTGSGIIGGYEPAKISSNILPSAMKTKFFKLSHTNDNEDVIE
SCVRILHRGGIVALPTDTLYGVACLAQSTEAVEKLYEIKARNPLKPVAICVGDLYKVCQW
TRFPQGLIQSVSKTLGLEDQLDCQRPSSPGVLYGLLEDLLPGPVTIVTERSPSLNNTLNP
KTSLVGIRVPDHKFIKDLTNRLREPLALTSANVSGEESSLRIEDFRSLWPKLDAVVDDGE
VGTRYVNKTLQYAKEGSTVVQILNDGVSFKILRPGCAYENTVSVLKCKYGLKLTM

Nucleotide sequence

Length: 1,415

>KH2012:KH.C1.940.v1.A.SL2-1
GTTTTAAAATGTCAACAACAATCAACTGTTACAGTAGTTCTGAAAATGAAAGTTTCAACA
CTGGCAGTGGAATTATAGGCGGTTATGAACCTGCTAAAATATCCAGCAACATTCTGCCTT
CTGCTATGAAAACCAAGTTCTTTAAACTATCTCACACAAATGACAATGAAGATGTGATTG
AAAGTTGTGTTCGAATCCTACATCGTGGAGGAATCGTAGCACTTCCAACTGATACTCTAT
ACGGTGTTGCCTGCCTCGCCCAAAGCACTGAAGCTGTTGAAAAACTTTATGAAATCAAAG
CTCGAAACCCGCTGAAGCCCGTAGCCATTTGCGTTGGTGACCTGTACAAAGTTTGCCAGT
GGACACGCTTCCCCCAAGGCCTTATTCAGTCTGTTTCAAAAACCCTTGGTTTAGAAGACC
AGTTAGACTGCCAGCGGCCGTCTTCACCTGGTGTTTTGTATGGTCTTCTTGAAGACTTAC
TTCCAGGTCCAGTCACAATAGTTACAGAAAGAAGTCCTTCGTTAAACAACACACTTAATC
CTAAAACGTCTCTCGTTGGTATCAGAGTACCCGACCATAAATTCATTAAAGATCTAACTA
ATCGTCTGCGTGAGCCTTTGGCCCTTACATCTGCAAACGTCAGTGGAGAAGAGTCTTCCC
TAAGAATTGAAGACTTCAGAAGTTTGTGGCCCAAACTTGATGCAGTGGTAGATGACGGCG
AAGTAGGAACAAGATATGTTAACAAGACATTACAATACGCCAAAGAGGGATCCACAGTTG
TACAGATCTTGAATGATGGTGTCTCATTTAAAATCTTGCGTCCAGGGTGTGCGTATGAAA
ATACTGTTTCTGTTTTAAAGTGTAAATATGGTCTTAAACTCACAATGTAGTTTTGGAACT
GGAACTGTTTCTGAACCAGTCTTAACTGCTTAGTTTTTCTAGTAACTATGTTTTTCTTGT
TTAAACATCTCTAAAACTCTGTTGACAGCAACTGTAAATTTAATACAGCTTTAAGTTTAT
ATCAACTAAGTTTGTACGGCTGTATATATTAAAACATATCTACAGTTATTAAAGCACAAA
CTCACAGCAAAAGCAAACCATTGGTGTGCTTGCCTGCTTAAACTACATTACCATAGTATT
TTGCTTTTCCTAAGCGGCTGATGCCTAGTAGCACTAAGTCTTATGCTGCACATTCTGTTT
CCAATTACATTTAGAATCCCATGACACAGTATTGAGTTACAGAAAAAATGCTATCTATTC
AATTATTTTGTTTTCAACTCTTTGCATTTATGATTTTACCAATTTACAATCACATTCAAA
ACTATCTTTTGTGTTTTCTACCTTACACCAATACACACACGTATTATGTCACACCATTCC
ATGCCTCGAAAATAAAATTCCTGCCTTGCCTAAAA

InterProScan

SUPERFAMILY	DHBP_synth_RibB-like_a/b_dom (IPR017945) - T[46-281] 1.68E-40
ProSiteProfiles	YrdC-like_dom (IPR006070) - T[56-277] 22.79
Pfam	YrdC-like_dom (IPR006070) - T[65-275] 6.4E-40

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
YRDC_HUMAN	43.277 %	179	7.04E-55