- Clone 'AHC0AAA104YH06' >
- Clone 'cign034k18' >
- Clone 'ma161o10' >
- Clone 'cicl086k06' >
- Transcript 'KH2012:KH.C1.997.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.997.v1.A.SL1-1
Possible name(s)
ATAD2; ATAD2B; VCP
Gene model
Location
KhC1 [212,986 / 231,455]
Amino acid sequence
Length: 1,123
>KH.C1.997.v1.A.SL1-1
ITMVSTRSGSSVKKSPKSPTLEPRHSTRRHKLIEDDSNDDESDFLSLKSSKKEFLSVEFS
HDTPKSLYNDSPVLKRPSRRREPSRHLNDEEEYLSKVERQKRNHTRSLFSLGLEDEGSSC
EEDGIGSLAASSRARTSSRDKNFPNMLLRRGINGENQVDRNEIKYRERARSQSKEHVNPE
LRSLLKAQGKDPASALNSSQPDIYSSIKSRHRLRRPRVFYGDYEFATSSSQSRLEDDPNT
STEVGDLGSDPKEQDLHQNDVVEDEDDLDDDNEVPYRRYSLRTKRAQPHRLNYELIRQPR
RNQRTMFDQLPRSPVRRKRVFNQDQHNPTSPYQSRHRRTNSQGASSSGSTSASDDEKKFE
RRKKRSMAKARNKCLPMNFSSSELATHGFAREREKIGSSLADVDPMSLDKSVKFSSIGGH
KHHIRSLKEMIVFPLIYPEVFTKFSIAPPRGCLFYGPPGTGKTLMARALANECSTDDKKV
AFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSI
VSTLLALMDGLDSRGEIVVIGATNRIDSIDPALRRPGRFDREFLFPLPDKKSRHDILKIH
TSKWDPPLSSNFIETIAEKTVGYCGADLKALCTEATLNALRKSFPQIYATNDKLKFDVDK
IKIGPNNFYRAMKVFLKPVDLEEVPDYADVIENPMDISTMMNKIDQHRYQNVALFLHDIG
LVCSNALEYNPDLCAEDKSIRHRACLLRDMAHAIVEEDLDPNFERKCNEVIEAQKRRKAN
PNKFAPSYYNVLPKQKRMENNEATILQEATVVLEDHMKATPTKSSAVKKRTRRRNKWACG
MLSKKKRPKLDMHVRDDPETNGVISTEDEESNDVSSSKSSTKMEVQNGIKSRSLSPGEEK
NAGSESSPKIISSDENPANTEDENLPSANQDDGWFSRSKKLAYEKDAGSESSTKMIFPDL
PTAEDDLIVCKINDEHPPDSAFHQMMGEDEMMENEVSSDANIDLCEEDEDKSDTEEVSNK
MEKVDDPDETSRTRTPSLCDVPTNETSSQPLIVDTLRLNQLLEYTVKVTSKLDIADLERL
YSILTRSIYKHRHQYDKTQLVQDLQNEVIQFMSSVPGDASIIS
Nucleotide sequence
Length: 4,129
>KH2012:KH.C1.997.v1.A.SL1-1
GACCCATAAGCCTTATAGATTTAAGGCAACCCCCACACAATGCAATATACGCATGCTGAT
AAATAACCATGGTTTCAACAAGAAGTGGAAGTTCCGTCAAAAAGTCGCCCAAGTCTCCGA
CCCTCGAGCCCCGTCATTCCACACGGAGACACAAACTAATAGAAGACGACTCAAATGATG
ACGAATCAGACTTTCTTTCCTTAAAATCATCAAAAAAAGAGTTTCTCTCTGTTGAGTTTT
CACACGATACACCCAAGTCTCTCTACAATGACAGTCCTGTGCTTAAACGACCATCTCGAC
GCAGAGAACCATCAAGACACCTGAATGATGAAGAGGAGTATTTATCCAAAGTTGAAAGAC
AGAAAAGGAATCACACCAGGTCTTTGTTCTCCCTCGGTCTTGAAGATGAAGGAAGCTCTT
GTGAGGAAGATGGGATTGGGTCTCTCGCTGCATCATCAAGAGCACGAACATCTTCCAGGG
ATAAAAATTTCCCGAACATGTTGCTACGACGAGGAATTAACGGCGAAAATCAAGTTGATA
GAAACGAGATAAAATATCGTGAACGTGCACGCAGCCAAAGTAAGGAACACGTTAACCCTG
AATTGCGGAGTTTATTAAAAGCACAAGGAAAAGACCCGGCAAGTGCTTTGAATTCGAGCC
AACCCGATATTTACAGTTCGATAAAATCTCGCCATCGTCTACGTCGGCCCCGTGTTTTTT
ACGGAGATTACGAGTTTGCTACTTCTTCCTCCCAGTCGAGGTTGGAGGATGATCCAAATA
CCTCCACGGAGGTTGGGGATCTGGGAAGTGATCCCAAAGAGCAAGACCTTCATCAAAATG
ATGTTGTTGAAGACGAAGACGACTTGGACGACGACAACGAAGTCCCGTATCGAAGATATT
CCTTGAGAACAAAGAGAGCACAACCTCACAGGCTTAATTACGAATTGATCCGACAGCCTC
GGAGAAACCAACGTACAATGTTCGACCAACTTCCAAGGTCTCCAGTGAGGAGGAAGAGAG
TTTTCAACCAAGATCAACATAATCCAACATCACCGTATCAGAGCAGACACAGGAGGACTA
ATTCTCAGGGAGCATCAAGCAGCGGTTCAACTTCGGCTTCCGATGACGAGAAGAAGTTTG
AACGAAGAAAGAAAAGGAGCATGGCCAAAGCTAGGAACAAGTGCCTTCCCATGAACTTTT
CCTCCAGTGAGCTTGCTACGCATGGGTTTGCGAGGGAACGAGAAAAAATCGGATCCTCGC
TCGCTGATGTGGATCCAATGTCTCTCGATAAATCAGTTAAGTTCTCGTCGATTGGCGGCC
ATAAACATCATATAAGGTCGCTGAAAGAGATGATCGTCTTCCCGTTAATTTATCCGGAAG
TGTTCACCAAGTTCAGCATTGCCCCACCAAGAGGTTGTTTATTCTATGGACCACCGGGCA
CAGGGAAGACACTGATGGCACGAGCGCTTGCAAATGAATGCTCAACTGATGACAAGAAAG
TTGCTTTCTTTATGAGAAAGGGTGCGGACTGCTTGAGTAAATGGGTGGGCGAGTCAGAAC
GACAACTAAGGCTGTTGTTTGACCAAGCCTACCAGATGAGACCTTCCATCATTTTCTTTG
ATGAGATAGATGGTTTGGCCCCGGTAAGATCATCGAGACAAGATCAAATCCATTCCTCCA
TCGTGTCCACTCTACTTGCCCTCATGGATGGTTTGGATAGTCGCGGTGAAATTGTTGTTA
TCGGCGCTACAAACCGAATCGATTCCATCGACCCTGCATTGCGACGACCGGGAAGATTTG
ATCGTGAATTTCTTTTTCCCCTCCCGGATAAAAAGTCCCGCCACGATATATTGAAGATAC
ACACGAGTAAATGGGATCCTCCTTTGTCTTCCAACTTTATTGAGACAATCGCTGAGAAAA
CTGTTGGTTATTGTGGAGCTGACCTCAAAGCATTATGCACCGAAGCCACATTAAATGCAT
TACGCAAGTCCTTCCCACAAATATACGCAACTAACGATAAACTCAAGTTCGATGTCGATA
AAATTAAGATCGGACCGAATAATTTCTACAGAGCTATGAAGGTGTTTTTGAAACCAGTCG
ATTTGGAAGAAGTTCCGGACTATGCGGATGTCATCGAAAACCCAATGGATATTTCTACAA
TGATGAATAAAATAGACCAACATAGATATCAAAACGTGGCGTTATTCTTGCATGACATTG
GTCTAGTGTGCAGCAATGCGTTGGAATATAACCCAGACTTGTGCGCAGAAGATAAATCAA
TTCGGCACCGTGCGTGTCTGCTGCGCGATATGGCGCACGCCATCGTAGAGGAAGACCTCG
ATCCCAACTTTGAGAGGAAATGTAACGAAGTTATTGAGGCACAAAAACGAAGGAAAGCAA
ACCCGAACAAGTTCGCTCCTTCGTATTATAATGTATTGCCCAAGCAGAAGAGGATGGAAA
ATAATGAAGCCACAATCCTCCAGGAAGCCACCGTCGTGTTAGAAGATCACATGAAAGCGA
CTCCCACTAAATCTTCGGCTGTTAAAAAGAGGACGAGACGTAGAAATAAGTGGGCGTGCG
GGATGCTGAGTAAAAAGAAAAGACCAAAGCTCGACATGCATGTGAGGGACGACCCGGAAA
CGAACGGGGTCATCAGCACGGAAGACGAGGAAAGCAACGATGTGTCCTCCTCCAAGAGCA
GCACAAAGATGGAGGTGCAGAATGGGATAAAGAGTCGTAGTCTCTCCCCTGGGGAGGAGA
AGAATGCGGGATCAGAATCTTCCCCAAAGATCATCTCGTCGGATGAGAATCCTGCAAACA
CTGAGGATGAAAATCTTCCGAGCGCTAATCAGGACGATGGTTGGTTTTCGAGATCGAAAA
AGTTGGCATATGAAAAGGATGCGGGGTCAGAATCCTCCACAAAGATGATCTTCCCCGACC
TCCCAACCGCCGAGGATGATCTGATTGTTTGTAAGATCAACGACGAGCATCCTCCGGACT
CCGCGTTCCACCAGATGATGGGGGAAGATGAAATGATGGAGAACGAGGTTTCTTCCGATG
CCAACATCGATCTTTGTGAGGAGGATGAGGATAAATCAGACACTGAAGAAGTTTCCAACA
AAATGGAAAAGGTTGACGATCCGGATGAAACCAGTCGTACACGAACACCGTCATTATGCG
ACGTCCCAACAAATGAAACCTCAAGTCAACCATTAATTGTCGATACTTTGAGACTTAATC
AACTGCTAGAATACACTGTGAAGGTCACATCAAAGTTAGACATAGCTGATCTAGAACGTT
TGTATTCGATCCTTACAAGGAGTATCTACAAACACAGACATCAATACGATAAGACTCAAC
TGGTACAAGATTTACAAAACGAAGTTATTCAGTTCATGTCATCAGTGCCTGGTGACGCCT
CAATCATTTCATAGAATGCAGAAACCGTTATTGTGTAGAAACATTAGTTCCTGTTCTAAA
GCTGCCATCTCCATAGCTTTATAATTGAAAGTACAATGCCTATGTTTGCTGTTGTAGTAG
GAGGGGTAAGATGGGACACCTTATCATTCTGTTTCTCGTGTCATTTGTATAGTAAACAAA
AAAATTTAAATAAAAAACTGTATCTTCAGGACTCCCATTGGCCGTTGTTATTTGTTTAAA
ACACGATCAGGGTATTTGGATATTAAGAGCTAAAGGTGTCCCATCTTTCCCTACCCTACT
ATATAGTTTGTTCTGTTGACGCTGCTTCGAAGTAGCAACAGTTGTTTTGAGGTTGTTTTC
ATTGAAGGTAATAAACCTGTTACTCTATACCTGGCGTTTTCATTGAAAGACACTGAAACC
ATAGTTTCACATCGATGGAATTTCCTTGGTCGATTTTTATCAGAAATAAACCACTGACGA
ATTTCGGACATTTCATAGAACACGCAAAAGATGGCCTGCGTTTTCGGCAACACCTACATG
TGCGAGCAATTATTCTCAAAAATGAAACTTAATAAGAACAAAATGCGAACACAAATCACT
GATTCGCATTTAGACGGAATACTTCATCTTGCTTCTTCTTTGAAACCAGACATGGAAAAG
CTTTCGAAAGTCAAGCAACATCGCACTAATCAACCAAACTTACCGCGGT
| PANTHER |
ANCCA (IPR031252) - T[85-109] 5.6E-277 - T[236-673] 5.6E-277 - T[672-1113] 5.6E-277 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[410-687] 2.1E-62 |
| SMART |
AAA+_ATPase (IPR003593) - T[448-589] 7.0E-20 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[453-586] 8.4E-42 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[557-575] . |
| SMART |
Bromodomain (IPR001487) - T[654-760] 2.6E-16 |
| PRINTS |
Bromodomain (IPR001487) - T[670-683] 1.5E-9 - T[684-700] 1.5E-9 - T[700-718] 1.5E-9 - T[718-737] 1.5E-9 |
| Gene3D |
Bromodomain-like_sf (IPR036427) - T[670-778] 5.6E-34 |
| SUPERFAMILY |
Bromodomain-like_sf (IPR036427) - T[671-757] 7.72E-24 |
| Pfam |
Bromodomain (IPR001487) - T[673-731] 1.9E-18 |
| ProSiteProfiles |
Bromodomain (IPR001487) - T[675-730] 16.004 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TERA_HUMAN | 47.257 % | 219 | 2.55E-59 |
| ATAD2_HUMAN | 64.764 % | 508 | 3.78E-159 |
| ATD2B_HUMAN | 68.984 % | 540 | 2.13E-170 |