- Transcript 'KH2012:KH.C2.101.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.101.v2.A.SL1-1
Possible name(s)
SYT1; SYT2; SYT5
Gene model
Location
KhC2 [6,805,748 / 6,812,259]
Amino acid sequence
Length: 412
>KH.C2.101.v2.A.SL1-1
RGSKEMSLFRKLVKRAEDSSTDPTSDAADAPTTTQPPAPGGDTPEDVLKGAIDNIYSKLP
SWAWILIAIGAGLILLCVLYCCCKRCCCKKKKKKQEKKGLKNAIDLKSVKNMGDSYREKV
QPDVDEVDIGEKEDEEEKKLGKLQFSLDYDFQQNNLAVGVIQAADLPGMDMGGTSDPYVK
VFMLPDKKKKQETKVHRKTLNPVFNETFNFKVPYNEIGGKTLVFAVYDFDRFSKHDIIGE
VRVPMNQVDLGTITEEWRDLTSAENDKENEKLGDICFSLRYVPTAGKLTVVILEAKNLKK
MDVGGLSDPYVKITLMQGGKRLKKKKTTIKKNTLNPYFNESFSFEVPFEQIQKVALVVSV
FDYDRMGKNDPIGKLVLGCNASGTELRHWSDMLASPRRPIAQWHTLQMAEEG
Nucleotide sequence
Length: 3,556
>KH2012:KH.C2.101.v2.A.SL1-1
ACTTCGGTAGCACCGAATTAAATAATATTAGTTGTATAGGCTTTACAGTATCTTAAGTAT
CGGAAACTTTTAAGATAGCAGATAACCGGACGTGAGTCATTCGATAAATGATGTGTTAAC
AAAAGAAAGTTGATGTTATTTATCGCAGTATAGAAATACAGACGTACAAACGTTCGATAC
ATTCGACCGTTTTCCTTTATGTTATTATATTGTGATACTATTGTATTGAATAGTGCGTCA
CCATACGTGAATGCGACTTAAAATCGTCAAAATGCCGCGTGTTCATAACGAGACGATTGT
AGGGAGTATTACAGAGTAAAAGAAATTTTAGTTCAGCCTTCATTACCCTACGGTAAAATG
TTGCAACGGCTTGGAAATCGATTTTTAAATATGGCCAGCTTGTGGCGTTTGAATCTCGTA
TGGATTAATTTCCTTCATCAGGGATTTACATTTGAACCTTTTAATATATAGGTTTGTTCA
ATATTCGACCAAGTTATACCGCTGTAGTTGCTGATCAACTAAAGTTAGCGTGGAAGCAAG
GAGATGTCCTTGTTTCGGAAGTTGGTAAAGAGAGCGGAAGACTCCTCTACTGATCCAACA
AGTGATGCAGCGGATGCTCCGACAACAACACAACCTCCGGCACCAGGAGGAGATACTCCG
GAGGATGTCTTGAAAGGAGCAATTGACAACATTTACTCAAAACTTCCAAGTTGGGCATGG
ATTCTGATCGCAATTGGGGCAGGACTTATATTGTTATGTGTCCTATACTGTTGCTGTAAA
CGATGCTGCTGCAAAAAGAAGAAGAAAAAGCAGGAAAAGAAAGGCCTAAAGAACGCTATA
GATCTCAAATCTGTAAAGAATATGGGTGACAGTTACAGAGAAAAAGTCCAACCTGACGTT
GACGAAGTTGATATCGGTGAAAAAGAAGACGAAGAAGAGAAGAAATTGGGAAAGTTGCAA
TTTTCACTTGATTATGATTTCCAACAAAACAATTTGGCTGTCGGGGTAATTCAAGCTGCG
GATCTTCCTGGAATGGACATGGGAGGGACTTCGGATCCTTATGTCAAAGTATTCATGCTT
CCTGACAAGAAGAAAAAGCAAGAAACCAAAGTCCATCGAAAAACATTGAACCCGGTTTTC
AACGAAACATTCAATTTCAAGGTACCATACAATGAAATTGGTGGAAAAACTTTGGTTTTC
GCCGTTTACGACTTTGATCGCTTCTCAAAACACGATATTATCGGTGAAGTGAGAGTCCCT
ATGAACCAAGTCGATCTTGGTACGATCACTGAAGAATGGAGAGACTTAACCAGTGCCGAA
AACGACAAAGAAAACGAAAAACTTGGAGACATTTGCTTTTCACTGAGGTATGTCCCTACA
GCTGGTAAACTCACAGTCGTTATCTTGGAGGCGAAAAACTTGAAAAAGATGGATGTTGGA
GGATTATCGGATCCCTACGTGAAGATCACACTGATGCAGGGAGGAAAACGTTTAAAGAAG
AAAAAGACGACGATTAAAAAGAACACACTTAACCCCTACTTTAACGAGTCGTTTAGCTTT
GAAGTCCCATTCGAACAAATACAGAAAGTTGCCTTGGTGGTGAGCGTCTTCGACTACGAT
AGGATGGGAAAGAATGATCCGATTGGAAAGCTAGTGCTCGGATGTAATGCCTCCGGTACC
GAACTGCGACATTGGTCAGACATGTTGGCTTCGCCACGACGACCCATAGCGCAATGGCAT
ACTCTGCAAATGGCGGAAGAAGGCTAGAGTTTTCAACAGGAAGTTTTTTCTTGTAATAAC
TAAAGCGGTTAGAAACTCGCCGCTTACCTAAACATGTAGTAAAAACGTAGATCAGCTGAG
ACAACAATTTCACAAGTTCCACATATATATATTCCTGCACTTCGACACTCAAACCTCCAC
GGCAAGATTGCTTTTTCCTATTTATTTATTCCGAGCTGTATAGTCAGTACAACGAATCCG
AATTTCTGCAAGCTTGCTTAACGCTTCAAATGTCTTAAATTGTCGTTCGTGGTTATCAAT
GTTATCGTTACCACGGGTACATGAATATTTCGTGCAATCAATGTCGTTAGATCGTAATCG
AATGTTGTAGACTGTACTGCCCGCTAACCCTTTTCCGAATATATGTTATCCGTCCACTAA
CACAACACATTGACGCAATCTATTACTTTAAAATGTCACCGCAAAGGCACTTGACATACG
AAAAACAGCGGTAAACAGACGCACATTCAAGAAATTGTATCCGTATGGTTAACCATTGTC
GTAGCAGTGTTTCCTGTTAATTTCAAGAAAAACACAATAACAACAACAACAGTATCTCAA
AATGGCCATTTAGATTAGGTTATCGTGTAGTTACATTGGCTTATCAGAGAAAGCACTCGG
TCCAGCAAACCCGTTGGCCGGATAAGAAACGGTGCATGTAAAATCAATATATCGAGCGCT
GATCGATATTAAAGAAATTAGATTTGCATTGCCCTTTACTCTGCAGCTTTAATATTCGCT
TTGTAAAATTACTGGTCTCCAAATAAAAGCTCTGCTCGAATGCATAATTTTGTGTATACC
ACAAAACTAAATCTAACCGGATCCCAAACCGCATTTTACTGGTTCTGTATAGCCAACCGC
TAAGTCATGCCATAGGCAAATACGTCATGATTAAATTTGGCGTGTCGTATGTCATCAAGA
TGATGTATGACCATACCCATGTCGTCTATGTTATATAAGCCTAGTTTGTGCATCGTACGT
CGCTGTAGATCGAATTTCATTGGCTTGATTCAGAATTCCCACCGGTGTAAGATTGCGTTT
TCTCCTTGTTGCTTTTTATTTGATCAATATTCTGCTCTGTTCCTTGTATAGTTTCTTTAT
AATCTTCCCATGTCGTCACATGTCATTATTTATCTGCTTTATTATAAGACTACGAAACCC
TTCAGTTTTCTTTGCTTTGCCACGATAGTAACTTCTGCGTAGTTATATCACAACTATGTG
TCTACGAACTGTTCTGTACATAAGTGAACGTACATGTTTATCAACGGTGTGCAGCATTTG
GTTGGGAATATCGTAAGGGTGCATAACTTTCTTCTTATTTTATGCAAGTCTTTTGGTCTG
TTGGTTTTAGTGTTGTGACGGTTTGGGTTTGTGGGTGTTTTTAGTGGTCATGAATCATGA
TTTCAATTTGCACACAGCTCTGATTTTACCACCCTAATTGGGGTGGGTGTAAAAACTGAG
CTTTTAGTAACTGTACATAACTTGGTTGTCGTCAGGTAGTTGTGTACACCGTAATGTTTA
TGTATGAAGTACTTTGCCGTAGAAAAGCAAATATAGGTAAATCCAATCAGTACATTGCAG
TAACTTTTGTATATTTATGAATATCAGCTTCTTTATGTTACTTTGTGGTTCGTTTACTCC
TGATATAACTCGTCGTAACTGAATAACTAACCGTGCACTTTTATCTTCATTTTCACCATT
TATGTCGTAACACACGAGTCAACGTCACAATAATGTCGATATTCGACCACGAAATAAAGC
TCCCAAAGCTAACATG
| PANTHER |
Synaptotagmin1/2 (IPR015428) - T[52-411] 1.4E-185 |
| Gene3D |
C2_domain_sf (IPR035892) - T[127-265] 7.3E-50 - T[266-411] 1.4E-58 |
| PRINTS |
Synaptotagmin (IPR001565) - T[143-158] 2.2E-19 - T[158-171] 2.2E-19 - T[213-228] 2.2E-19 - T[233-243] 2.2E-19 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[154-242] 21.453 - T[285-376] 22.977 |
| Pfam |
C2_dom (IPR000008) - T[155-260] 1.8E-29 - T[286-391] 2.5E-25 |
| SMART |
C2_dom (IPR000008) - T[155-257] 2.5E-24 - T[287-401] 1.3E-26 |
| PRINTS |
C2_dom (IPR000008) - T[171-183] 3.0E-10 - T[198-211] 3.0E-10 - T[222-230] 3.0E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYT2_HUMAN | 63.923 % | 462 | 2.44E-162 |
| SYT5_HUMAN | 57.584 % | 408 | 1.38E-141 |
| SYT1_HUMAN | 68.25 % | 478 | 2.97E-168 |