- Transcript 'KH2012:KH.C1.403.v1....' >
- Clone 'cign040l19' >
- Region 'REG00000878' >
- Transcript 'KH2012:KH.C8.640.v2....' >
- Transcript 'KH2012:KH.C2.101.v2....'
Transcript Model
Transcript Id
KH2012:KH.C2.101.v2.A.SL3-1
Possible name(s)
SYT1; SYT2; SYT5
Gene model
Location
KhC2 [6,806,219 / 6,812,259]
Amino acid sequence
Length: 412
>KH.C2.101.v2.A.SL3-1
RGSKEMSLFRKLVKRAEDSSTDPTSDAADAPTTTQPPAPGGDTPEDVLKGAIDNIYSKLP
SWAWILIAIGAGLILLCVLYCCCKRCCCKKKKKKQEKKGLKNAIDLKSVKNMGDSYREKV
QPDVDEVDIGEKEDEEEKKLGKLQFSLDYDFQQNNLAVGVIQAADLPGMDMGGTSDPYVK
VFMLPDKKKKQETKVHRKTLNPVFNETFNFKVPYNEIGGKTLVFAVYDFDRFSKHDIIGE
VRVPMNQVDLGTITEEWRDLTSAENDKENEKLGDICFSLRYVPTAGKLTVVILEAKNLKK
MDVGGLSDPYVKITLMQGGKRLKKKKTTIKKNTLNPYFNESFSFEVPFEQIQKVALVVSV
FDYDRMGKNDPIGKLVLGCNASGTELRHWSDMLASPRRPIAQWHTLQMAEEG
Nucleotide sequence
Length: 3,085
>KH2012:KH.C2.101.v2.A.SL3-1
GTTTGTTCAATATTCGACCAAGTTATACCGCTGTAGTTGCTGATCAACTAAAGTTAGCGT
GGAAGCAAGGAGATGTCCTTGTTTCGGAAGTTGGTAAAGAGAGCGGAAGACTCCTCTACT
GATCCAACAAGTGATGCAGCGGATGCTCCGACAACAACACAACCTCCGGCACCAGGAGGA
GATACTCCGGAGGATGTCTTGAAAGGAGCAATTGACAACATTTACTCAAAACTTCCAAGT
TGGGCATGGATTCTGATCGCAATTGGGGCAGGACTTATATTGTTATGTGTCCTATACTGT
TGCTGTAAACGATGCTGCTGCAAAAAGAAGAAGAAAAAGCAGGAAAAGAAAGGCCTAAAG
AACGCTATAGATCTCAAATCTGTAAAGAATATGGGTGACAGTTACAGAGAAAAAGTCCAA
CCTGACGTTGACGAAGTTGATATCGGTGAAAAAGAAGACGAAGAAGAGAAGAAATTGGGA
AAGTTGCAATTTTCACTTGATTATGATTTCCAACAAAACAATTTGGCTGTCGGGGTAATT
CAAGCTGCGGATCTTCCTGGAATGGACATGGGAGGGACTTCGGATCCTTATGTCAAAGTA
TTCATGCTTCCTGACAAGAAGAAAAAGCAAGAAACCAAAGTCCATCGAAAAACATTGAAC
CCGGTTTTCAACGAAACATTCAATTTCAAGGTACCATACAATGAAATTGGTGGAAAAACT
TTGGTTTTCGCCGTTTACGACTTTGATCGCTTCTCAAAACACGATATTATCGGTGAAGTG
AGAGTCCCTATGAACCAAGTCGATCTTGGTACGATCACTGAAGAATGGAGAGACTTAACC
AGTGCCGAAAACGACAAAGAAAACGAAAAACTTGGAGACATTTGCTTTTCACTGAGGTAT
GTCCCTACAGCTGGTAAACTCACAGTCGTTATCTTGGAGGCGAAAAACTTGAAAAAGATG
GATGTTGGAGGATTATCGGATCCCTACGTGAAGATCACACTGATGCAGGGAGGAAAACGT
TTAAAGAAGAAAAAGACGACGATTAAAAAGAACACACTTAACCCCTACTTTAACGAGTCG
TTTAGCTTTGAAGTCCCATTCGAACAAATACAGAAAGTTGCCTTGGTGGTGAGCGTCTTC
GACTACGATAGGATGGGAAAGAATGATCCGATTGGAAAGCTAGTGCTCGGATGTAATGCC
TCCGGTACCGAACTGCGACATTGGTCAGACATGTTGGCTTCGCCACGACGACCCATAGCG
CAATGGCATACTCTGCAAATGGCGGAAGAAGGCTAGAGTTTTCAACAGGAAGTTTTTTCT
TGTAATAACTAAAGCGGTTAGAAACTCGCCGCTTACCTAAACATGTAGTAAAAACGTAGA
TCAGCTGAGACAACAATTTCACAAGTTCCACATATATATATTCCTGCACTTCGACACTCA
AACCTCCACGGCAAGATTGCTTTTTCCTATTTATTTATTCCGAGCTGTATAGTCAGTACA
ACGAATCCGAATTTCTGCAAGCTTGCTTAACGCTTCAAATGTCTTAAATTGTCGTTCGTG
GTTATCAATGTTATCGTTACCACGGGTACATGAATATTTCGTGCAATCAATGTCGTTAGA
TCGTAATCGAATGTTGTAGACTGTACTGCCCGCTAACCCTTTTCCGAATATATGTTATCC
GTCCACTAACACAACACATTGACGCAATCTATTACTTTAAAATGTCACCGCAAAGGCACT
TGACATACGAAAAACAGCGGTAAACAGACGCACATTCAAGAAATTGTATCCGTATGGTTA
ACCATTGTCGTAGCAGTGTTTCCTGTTAATTTCAAGAAAAACACAATAACAACAACAACA
GTATCTCAAAATGGCCATTTAGATTAGGTTATCGTGTAGTTACATTGGCTTATCAGAGAA
AGCACTCGGTCCAGCAAACCCGTTGGCCGGATAAGAAACGGTGCATGTAAAATCAATATA
TCGAGCGCTGATCGATATTAAAGAAATTAGATTTGCATTGCCCTTTACTCTGCAGCTTTA
ATATTCGCTTTGTAAAATTACTGGTCTCCAAATAAAAGCTCTGCTCGAATGCATAATTTT
GTGTATACCACAAAACTAAATCTAACCGGATCCCAAACCGCATTTTACTGGTTCTGTATA
GCCAACCGCTAAGTCATGCCATAGGCAAATACGTCATGATTAAATTTGGCGTGTCGTATG
TCATCAAGATGATGTATGACCATACCCATGTCGTCTATGTTATATAAGCCTAGTTTGTGC
ATCGTACGTCGCTGTAGATCGAATTTCATTGGCTTGATTCAGAATTCCCACCGGTGTAAG
ATTGCGTTTTCTCCTTGTTGCTTTTTATTTGATCAATATTCTGCTCTGTTCCTTGTATAG
TTTCTTTATAATCTTCCCATGTCGTCACATGTCATTATTTATCTGCTTTATTATAAGACT
ACGAAACCCTTCAGTTTTCTTTGCTTTGCCACGATAGTAACTTCTGCGTAGTTATATCAC
AACTATGTGTCTACGAACTGTTCTGTACATAAGTGAACGTACATGTTTATCAACGGTGTG
CAGCATTTGGTTGGGAATATCGTAAGGGTGCATAACTTTCTTCTTATTTTATGCAAGTCT
TTTGGTCTGTTGGTTTTAGTGTTGTGACGGTTTGGGTTTGTGGGTGTTTTTAGTGGTCAT
GAATCATGATTTCAATTTGCACACAGCTCTGATTTTACCACCCTAATTGGGGTGGGTGTA
AAAACTGAGCTTTTAGTAACTGTACATAACTTGGTTGTCGTCAGGTAGTTGTGTACACCG
TAATGTTTATGTATGAAGTACTTTGCCGTAGAAAAGCAAATATAGGTAAATCCAATCAGT
ACATTGCAGTAACTTTTGTATATTTATGAATATCAGCTTCTTTATGTTACTTTGTGGTTC
GTTTACTCCTGATATAACTCGTCGTAACTGAATAACTAACCGTGCACTTTTATCTTCATT
TTCACCATTTATGTCGTAACACACGAGTCAACGTCACAATAATGTCGATATTCGACCACG
AAATAAAGCTCCCAAAGCTAACATG
| PANTHER |
Synaptotagmin1/2 (IPR015428) - T[52-411] 1.4E-185 |
| Gene3D |
C2_domain_sf (IPR035892) - T[127-265] 7.3E-50 - T[266-411] 1.4E-58 |
| PRINTS |
Synaptotagmin (IPR001565) - T[143-158] 2.2E-19 - T[158-171] 2.2E-19 - T[213-228] 2.2E-19 - T[233-243] 2.2E-19 |
| ProSiteProfiles |
C2_dom (IPR000008) - T[154-242] 21.453 - T[285-376] 22.977 |
| Pfam |
C2_dom (IPR000008) - T[155-260] 1.8E-29 - T[286-391] 2.5E-25 |
| SMART |
C2_dom (IPR000008) - T[155-257] 2.5E-24 - T[287-401] 1.3E-26 |
| PRINTS |
C2_dom (IPR000008) - T[171-183] 3.0E-10 - T[198-211] 3.0E-10 - T[222-230] 3.0E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYT2_HUMAN | 63.923 % | 462 | 2.44E-162 |
| SYT5_HUMAN | 57.584 % | 408 | 1.38E-141 |
| SYT1_HUMAN | 68.25 % | 478 | 2.97E-168 |