- Transcript 'KH2012:KH.C8.640.v1....' >
- Molecular Tool 'En>Ngn (Stolfi 2011)' >
- Transcript 'KH2012:KH.C2.108.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.108.v1.A.ND1-2
Possible name(s)
RPS3
Gene model
Location
KhC2 [2,417,029 / 2,419,672]
Amino acid sequence
Length: 268
>KH.C2.108.v1.A.ND1-2
NLFTKVASMAAQISKKRKFVNDGLFKAELNELLWRELAEDGYSGVEVRVTPSRTEIIILA
TRTQNVLGEKGRRIRELTAMVQKRFKFKDDGVELYAEKVANRGLCATAQCESLRYKLLGG
LAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVREYVDTAV
RHVLLRQGVLGIKVKIMLPWDPQGKIGPKKPLPDNVNIVEPKDEEAITGPRSESKVTKPM
PDPMPAAPQQAAMPPMQQVPPQQTMPPM
Nucleotide sequence
Length: 858
>KH2012:KH.C2.108.v1.A.ND1-2
TCGCCTCCAATGAAACCTCTTTACCAAAGTTGCGAGTATGGCAGCGCAGATATCTAAGAA
GAGGAAGTTCGTCAACGACGGTCTCTTCAAAGCTGAGCTTAACGAATTGCTCTGGCGTGA
ACTTGCCGAAGATGGCTACAGTGGAGTAGAGGTTCGTGTCACACCCTCAAGAACCGAGAT
CATCATTCTTGCCACTCGTACGCAGAATGTGTTGGGTGAGAAGGGACGAAGGATCCGTGA
ATTGACCGCTATGGTCCAGAAGCGATTTAAGTTCAAAGATGATGGTGTTGAGTTGTATGC
TGAAAAGGTGGCAAACCGTGGTTTGTGTGCAACAGCTCAGTGCGAATCTCTTCGATACAA
ACTTCTTGGAGGACTGGCAGTGCGAAGAGCATGCTATGGTGTTCTCCGTTTCATCATGGA
GTCTGGAGCAAAGGGTTGCGAGGTGGTTGTGTCTGGTAAACTGCGTGGTCAGCGTGCCAA
GGCAATGAAATTTGTTGATGGTTTGATGATTCACTCTGGTGACCCAGTCCGTGAATATGT
TGACACTGCAGTGCGCCATGTGCTGCTCAGACAAGGTGTCTTGGGTATCAAGGTTAAAAT
CATGCTTCCTTGGGATCCACAAGGTAAAATCGGACCCAAGAAACCTCTGCCTGACAATGT
AAACATTGTTGAACCTAAAGATGAAGAAGCCATCACTGGGCCAAGGAGTGAATCCAAGGT
TACCAAGCCGATGCCAGATCCCATGCCTGCAGCTCCACAGCAAGCAGCTATGCCTCCAAT
GCAGCAGGTCCCACCCCAGCAAACCATGCCACCTATGTAAGGTTGCTGGGTTCTATCAAT
AAAATGGCTATTCAAAAA
| Gene3D |
KH_dom-like_a/b (IPR015946) - T[6-99] 1.2E-45 |
| TIGRFAM |
Ribosomal_S3_euk/arc (IPR005703) - T[16-220] 1.0E-70 |
| SUPERFAMILY |
KH_sf_prok-type (IPR009019) - T[18-107] 6.21E-25 |
| ProSiteProfiles |
KH_dom_type_2 (IPR004044) - T[29-100] 11.405 |
| Pfam |
KH_dom_type_2 (IPR004044) - T[29-101] 2.3E-10 |
| SUPERFAMILY |
Ribosomal_S3_C_sf (IPR036419) - T[101-200] 1.44E-27 |
| Gene3D |
Ribosomal_S3_C_sf (IPR036419) - T[101-251] 4.6E-71 |
| Pfam |
Ribosomal_S3_C (IPR001351) - T[114-196] 3.3E-23 |
| ProSitePatterns |
Ribosomal_S3_CS (IPR018280) - T[155-191] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RS3_HUMAN | 85.185 % | 409 | 3.45E-146 |