Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C2.108.v1.A.nonSL8-2

Possible name(s)

RPS3

Gene model

KH2012:KH.C2.108

Location

KhC2 [2,417,037 / 2,419,672]

Sequences

Amino acid sequence

Length: 268

>KH.C2.108.v1.A.nonSL8-2
NLFTKVASMAAQISKKRKFVNDGLFKAELNELLWRELAEDGYSGVEVRVTPSRTEIIILA
TRTQNVLGEKGRRIRELTAMVQKRFKFKDDGVELYAEKVANRGLCATAQCESLRYKLLGG
LAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKAMKFVDGLMIHSGDPVREYVDTAV
RHVLLRQGVLGIKVKIMLPWDPQGKIGPKKPLPDNVNIVEPKDEEAITGPRSESKVTKPM
PDPMPAAPQQAAMPPMQQVPPQQTMPPM

Nucleotide sequence

Length: 850

>KH2012:KH.C2.108.v1.A.nonSL8-2
AATGAAACCTCTTTACCAAAGTTGCGAGTATGGCAGCGCAGATATCTAAGAAGAGGAAGT
TCGTCAACGACGGTCTCTTCAAAGCTGAGCTTAACGAATTGCTCTGGCGTGAACTTGCCG
AAGATGGCTACAGTGGAGTAGAGGTTCGTGTCACACCCTCAAGAACCGAGATCATCATTC
TTGCCACTCGTACGCAGAATGTGTTGGGTGAGAAGGGACGAAGGATCCGTGAATTGACCG
CTATGGTCCAGAAGCGATTTAAGTTCAAAGATGATGGTGTTGAGTTGTATGCTGAAAAGG
TGGCAAACCGTGGTTTGTGTGCAACAGCTCAGTGCGAATCTCTTCGATACAAACTTCTTG
GAGGACTGGCAGTGCGAAGAGCATGCTATGGTGTTCTCCGTTTCATCATGGAGTCTGGAG
CAAAGGGTTGCGAGGTGGTTGTGTCTGGTAAACTGCGTGGTCAGCGTGCCAAGGCAATGA
AATTTGTTGATGGTTTGATGATTCACTCTGGTGACCCAGTCCGTGAATATGTTGACACTG
CAGTGCGCCATGTGCTGCTCAGACAAGGTGTCTTGGGTATCAAGGTTAAAATCATGCTTC
CTTGGGATCCACAAGGTAAAATCGGACCCAAGAAACCTCTGCCTGACAATGTAAACATTG
TTGAACCTAAAGATGAAGAAGCCATCACTGGGCCAAGGAGTGAATCCAAGGTTACCAAGC
CGATGCCAGATCCCATGCCTGCAGCTCCACAGCAAGCAGCTATGCCTCCAATGCAGCAGG
TCCCACCCCAGCAAACCATGCCACCTATGTAAGGTTGCTGGGTTCTATCAATAAAATGGC
TATTCAAAAA

InterProScan

Gene3D	KH_dom-like_a/b (IPR015946) - T[6-99] 1.2E-45
TIGRFAM	Ribosomal_S3_euk/arc (IPR005703) - T[16-220] 1.0E-70
SUPERFAMILY	KH_sf_prok-type (IPR009019) - T[18-107] 6.21E-25
ProSiteProfiles	KH_dom_type_2 (IPR004044) - T[29-100] 11.405
Pfam	KH_dom_type_2 (IPR004044) - T[29-101] 2.3E-10
SUPERFAMILY	Ribosomal_S3_C_sf (IPR036419) - T[101-200] 1.44E-27
Gene3D	Ribosomal_S3_C_sf (IPR036419) - T[101-251] 4.6E-71
Pfam	Ribosomal_S3_C (IPR001351) - T[114-196] 3.3E-23
ProSitePatterns	Ribosomal_S3_CS (IPR018280) - T[155-191] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3_HUMAN	85.185 %	409	3.45E-146