Aniseed - Transcript Card

Transcript 'Harore.CG.MTP2014.S6...' >
Transcript 'Phfumi.CG.MTP2014.S1...' >
Transcript 'KH2012:KH.L9.10.v1.A...' >
Molecular Tool 'Hox10mut-MO (Ikuta 2010)' >
Transcript 'KH2012:KH.C2.108.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.108.v2.A.nonSL2-1

Possible name(s)

RPS3

Gene model

KH2012:KH.C2.108

Location

KhC2 [2,417,046 / 2,418,152]

Sequences

Amino acid sequence

Length: 115

>KH.C2.108.v2.A.nonSL2-1
FTKVASMAAQISKKRKFVNDGLFKAELNELLWRELAEDGYSGVEVRVTPSRTEIIILATR
TQNVLGEKGRRIRELTAMVQKRFKFKDDGVEVNYQLSDVRNVKYRLTVLQPDWRE

Nucleotide sequence

Length: 762

>KH2012:KH.C2.108.v2.A.nonSL2-1
TCTTTACCAAAGTTGCGAGTATGGCAGCGCAGATATCTAAGAAGAGGAAGTTCGTCAACG
ACGGTCTCTTCAAAGCTGAGCTTAACGAATTGCTCTGGCGTGAACTTGCCGAAGATGGCT
ACAGTGGAGTAGAGGTTCGTGTCACACCCTCAAGAACCGAGATCATCATTCTTGCCACTC
GTACGCAGAATGTGTTGGGTGAGAAGGGACGAAGGATCCGTGAATTGACCGCTATGGTCC
AGAAGCGATTTAAGTTCAAAGATGATGGTGTTGAGGTAAATTATCAATTAAGTGATGTGC
GAAACGTCAAATATCGGCTTACTGTTTTGCAGCCAGATTGGAGAGAATAGCCTGTTAATT
TTATTCTCATGTCAACGTTTGGGCTTTGCCTCAAAAATCTGGACAGATGTGATTGATATA
AATTGCCATACAACTTGCTCATGTTTTTAGCCCGCTGTGTTTTTCTATGTTTGTTTGTTC
CTTTTTTTCGCTGGCACAGACTTCCACAAAAAGGTAATTTTTGGTCGGTGTTAATGCGTA
AATAAAAACCGTGCAAAAATAATAAGAGTTTAACCAAATATCCCAAAATCTTTTTGACCC
CTGGTTTATTACCGAGTTCCGCAACGGAAATATGGCAAATACTGAACCATTTTATAAACA
GTTTTGAGTTTATAGTTTATAAAAGGATTGCTATGCAGAAGTATAGCTTTGTTTTTATCT
GTTTTGTTCAAAACTTGCCTAATTTATTGTGAAATCTAAACA

InterProScan

Gene3D	KH_dom-like_a/b (IPR015946) - T[4-95] 5.6E-43
SUPERFAMILY	KH_sf_prok-type (IPR009019) - T[16-94] 2.16E-22
Pfam	KH_dom_type_2 (IPR004044) - T[27-100] 4.8E-10
ProSiteProfiles	KH_dom_type_2 (IPR004044) - T[27-100] 11.669

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3_HUMAN	84.884 %	149	3.04E-46