Aniseed - Transcript Card

Clone 'ciem833l06' >
Transcript 'KH2012:KH.C2.108.v2....'

Transcript Model

Transcript Id

KH2012:KH.C2.108.v2.A.nonSL8-1

Possible name(s)

RPS3

Gene model

KH2012:KH.C2.108

Location

KhC2 [2,417,037 / 2,418,152]

Sequences

Amino acid sequence

Length: 117

>KH.C2.108.v2.A.nonSL8-1
NLFTKVASMAAQISKKRKFVNDGLFKAELNELLWRELAEDGYSGVEVRVTPSRTEIIILA
TRTQNVLGEKGRRIRELTAMVQKRFKFKDDGVEVNYQLSDVRNVKYRLTVLQPDWRE

Nucleotide sequence

Length: 771

>KH2012:KH.C2.108.v2.A.nonSL8-1
AATGAAACCTCTTTACCAAAGTTGCGAGTATGGCAGCGCAGATATCTAAGAAGAGGAAGT
TCGTCAACGACGGTCTCTTCAAAGCTGAGCTTAACGAATTGCTCTGGCGTGAACTTGCCG
AAGATGGCTACAGTGGAGTAGAGGTTCGTGTCACACCCTCAAGAACCGAGATCATCATTC
TTGCCACTCGTACGCAGAATGTGTTGGGTGAGAAGGGACGAAGGATCCGTGAATTGACCG
CTATGGTCCAGAAGCGATTTAAGTTCAAAGATGATGGTGTTGAGGTAAATTATCAATTAA
GTGATGTGCGAAACGTCAAATATCGGCTTACTGTTTTGCAGCCAGATTGGAGAGAATAGC
CTGTTAATTTTATTCTCATGTCAACGTTTGGGCTTTGCCTCAAAAATCTGGACAGATGTG
ATTGATATAAATTGCCATACAACTTGCTCATGTTTTTAGCCCGCTGTGTTTTTCTATGTT
TGTTTGTTCCTTTTTTTCGCTGGCACAGACTTCCACAAAAAGGTAATTTTTGGTCGGTGT
TAATGCGTAAATAAAAACCGTGCAAAAATAATAAGAGTTTAACCAAATATCCCAAAATCT
TTTTGACCCCTGGTTTATTACCGAGTTCCGCAACGGAAATATGGCAAATACTGAACCATT
TTATAAACAGTTTTGAGTTTATAGTTTATAAAAGGATTGCTATGCAGAAGTATAGCTTTG
TTTTTATCTGTTTTGTTCAAAACTTGCCTAATTTATTGTGAAATCTAAACA

InterProScan

Gene3D	KH_dom-like_a/b (IPR015946) - T[6-97] 5.9E-43
SUPERFAMILY	KH_sf_prok-type (IPR009019) - T[18-96] 2.18E-22
ProSiteProfiles	KH_dom_type_2 (IPR004044) - T[29-102] 11.669
Pfam	KH_dom_type_2 (IPR004044) - T[29-102] 5.0E-10

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS3_HUMAN	84.884 %	149	2.59E-46