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  1. Transcript 'KH2012:KH.C2.1123.v1...'

Transcript Model

Transcript Id

KH2012:KH.C2.1123.v1.A.SL1-1

Possible name(s)

ADAMTS3; SEMA5A; UNC5C

Location

KhC2 [5,722,910 / 5,729,640]

Sequences

Amino acid sequence

Length: 682

>KH.C2.1123.v1.A.SL1-1
IILPPNMRALIALASFLAQVGFSSGSHDIRLSSSSRITTLSADVTVEASKTATTAIIELY
YEAEGNPLAGQIVPSKTGNKGDERTPLVFDCGYFSRLGEYRFALQDPMRESRVMTNVTVS
ATKRPEIELRTKSKHEASTTDVKVTVSLPPILCSSAVVNQYPTFIRFLRNNSVVMATREV
TFPPSSVVFLCDVFNQPGSYVAQLVMSVRNSDVIVAESNVMEVNWSGEYSLDVTDDVTNC
QGGSIKVFYKRPPCVPPNDVIQAVAMGNDGETFDLGNRTTRSDEDFVEFECQSIFDKLHN
SPGVCFRYMTSGVAMRTVCRRANTSLNFGVSGSWTTWSYWSQCERPCSVSLSRRTRTCDN
PKPMGGGQHCSKDPGINTEYQFEVGQPSNSGCGFASLMTSTNASSPCMCGCFVEAYHTGV
LTSPVQGQCGHNNEVVWRFYTSPGKFLRFRLIYSQLVAGELLTITDEWKTTAMRSQLRSV
TSQANIATVRYKLPPMNDVIASCGFMLLYKVIDSSSLQTTPSPSNNTDVIRKKETWIDDV
VKNPVMAGGITACVVIIIVVVIVTVATCCRLKRRDTKRTTEVMSMSHRLTTPPDGKSCSN
IVESESDRPAPVGETGYCDVETPVTPKPRAAYYLAQRQLQLMKKLGTQDSVQVYTASCAN
DQNIREQEALLFGNLQNSDAAT

Nucleotide sequence

Length: 2,212

>KH2012:KH.C2.1123.v1.A.SL1-1
GTTTGTGAGAAATTATTTTGTGACCTGCGAGCGACGATTTAAATTATTCTGCCGCCAAAT
ATGCGAGCACTGATTGCGCTGGCATCATTCTTAGCGCAAGTCGGATTTTCATCTGGATCA
CATGACATTCGATTATCGTCGTCGTCACGCATCACCACTCTCAGCGCTGACGTCACAGTA
GAGGCAAGCAAAACCGCAACAACGGCTATAATCGAACTTTATTACGAAGCGGAGGGAAAC
CCCCTGGCGGGCCAGATCGTGCCAAGTAAAACCGGAAACAAGGGAGACGAACGGACGCCT
TTAGTGTTCGATTGTGGTTACTTTTCACGTTTGGGCGAATACAGGTTCGCCCTTCAAGAC
CCCATGCGAGAGTCACGTGTCATGACCAACGTCACTGTGAGCGCCACCAAGCGACCAGAA
ATCGAACTCAGGACGAAATCAAAACATGAGGCGTCAACTACCGACGTAAAGGTAACTGTA
TCGTTACCTCCCATCCTATGTTCATCAGCTGTGGTCAACCAGTACCCGACGTTTATTCGA
TTTCTACGAAATAATTCAGTCGTCATGGCAACGCGTGAAGTCACATTCCCGCCATCTTCA
GTCGTTTTCTTGTGTGACGTATTCAACCAACCTGGTAGTTACGTCGCTCAGCTGGTCATG
TCTGTGCGTAATAGTGACGTCATAGTCGCCGAGAGCAACGTCATGGAAGTCAACTGGAGC
GGAGAGTACTCGCTTGACGTCACTGATGACGTCACAAATTGTCAAGGTGGATCGATTAAA
GTATTTTACAAACGACCACCTTGTGTGCCTCCCAATGACGTCATACAGGCCGTTGCCATG
GGTAACGACGGGGAGACTTTCGATCTTGGCAACCGCACGACTCGTAGCGACGAAGATTTC
GTCGAGTTTGAATGTCAATCGATATTCGATAAATTACACAACAGTCCTGGCGTTTGTTTC
CGCTACATGACTTCTGGGGTTGCCATGAGAACCGTCTGTAGGCGAGCCAATACAAGTTTA
AACTTTGGTGTATCTGGATCATGGACTACTTGGTCCTATTGGAGTCAATGTGAACGACCT
TGCAGTGTTTCCCTCAGCAGAAGGACAAGAACGTGCGATAATCCAAAACCTATGGGTGGC
GGGCAACACTGTTCTAAAGATCCTGGAATAAACACCGAGTATCAGTTTGAAGTAGGACAA
CCAAGCAATTCGGGTTGCGGATTCGCCTCTCTGATGACGTCAACGAATGCGTCATCACCG
TGCATGTGTGGTTGTTTTGTAGAAGCTTATCACACGGGTGTTCTCACTTCACCGGTGCAG
GGACAGTGTGGACATAATAACGAAGTTGTATGGAGGTTCTACACTTCTCCTGGAAAATTT
CTCCGCTTCCGTTTGATTTATTCCCAACTTGTTGCTGGAGAACTGCTCACCATCACTGAC
GAGTGGAAGACCACCGCTATGAGGTCACAGTTACGCAGTGTGACGTCACAAGCAAACATC
GCCACCGTGCGGTATAAACTACCGCCAATGAATGACGTCATCGCATCTTGCGGCTTCATG
CTCTTGTATAAAGTAATCGATAGCAGCAGTTTGCAAACAACACCGTCGCCTAGCAACAAT
ACTGACGTCATCAGGAAGAAGGAAACTTGGATTGATGACGTAGTCAAAAACCCTGTGATG
GCGGGTGGGATCACTGCTTGTGTCGTCATAATCATAGTCGTTGTAATCGTCACAGTTGCG
ACTTGTTGTCGCTTAAAAAGAAGAGATACAAAACGCACGACAGAAGTAATGTCCATGTCG
CACCGTCTCACAACGCCACCTGACGGTAAAAGCTGCAGCAACATCGTAGAAAGTGAATCA
GACAGACCGGCCCCTGTTGGGGAAACTGGTTATTGTGACGTAGAGACCCCGGTGACCCCG
AAACCTCGTGCAGCTTATTATCTCGCACAGCGACAGTTACAACTTATGAAGAAACTCGGC
ACACAGGATTCGGTTCAAGTTTATACAGCGTCGTGCGCGAACGATCAGAACATTCGCGAA
CAAGAAGCGTTATTATTTGGAAACCTTCAAAATTCAGATGCCGCCACGTGACACAAGGTT
ATGCATTGCAGTGCATGAGATTGGAAGCAGATTAAACATGATTCGTGTCGCTTGAACATA
AGGTGTATATGCAGATATCGTACTTGCTGTCAATAAAACCACTCGTTCGTAC

InterProScan

SUPERFAMILY
TSP1_rpt_sf (IPR036383) - T[330-374] 1.1E-8
Gene3D
TSP1_rpt_sf (IPR036383) - T[330-382] 2.2E-11
ProSiteProfiles
TSP1_rpt (IPR000884) - T[331-387] 9.802
SMART
TSP1_rpt (IPR000884) - T[334-393] 0.0074

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value