- Region 'REG00001412' >
- Transcript 'Haaura.CG.MTP2014.S3...' >
- Transcript 'KH2012:KH.C2.125.v1....'
Transcript Model
Transcript Id
KH2012:KH.C2.125.v1.R.nonSL3-1
Possible name(s)
FGF16; FGF20; FGF9
Gene model
Location
KhC2 [4,475,535 / 4,478,981]
Amino acid sequence
Length: 321
>KH.C2.125.v1.R.nonSL3-1
IATQQQQSTNSTYETSDRQPSILKMSMLTNMLGLSSNVPQSATGTNFLSSLLLAAVARAR
GKAVTGQSPPESPSSVLESSMSRTEAAKVQSVFSAKLGRARRKNSLSVDSSTPQKLTEET
MPVVHDRLPDLSLWSKIDEELKEQEKSSANGLLSSTSARSKRNTGMSAYDYDTQETTMRR
RMLYCKNGFNLQILRNGRISGTQESHNQYAVLEFISTGIGSLTIRGVASGLYLAMNSKGR
LYASETFNRECIFYETVLENNQNTFESFAHRNGSKKCYIALGRHGRPKQGCRLHPNNRHS
QFLPRNIDTDKVKNLYSGRLY
Nucleotide sequence
Length: 1,558
>KH2012:KH.C2.125.v1.R.nonSL3-1
AGCGGGAATCTTGACTCGGAGCATCACTCTTGAATCGCCACTCAGCAGCAACAGTCTACA
AACTCAACTTACGAAACTTCAGATAGACAGCCTTCCATACTGAAAATGTCTATGTTAACC
AACATGTTAGGCCTCAGCAGCAATGTTCCGCAATCAGCAACGGGAACAAACTTTTTAAGT
TCGCTTTTACTCGCAGCCGTAGCCCGAGCGAGAGGCAAGGCAGTTACCGGACAATCGCCA
CCCGAAAGCCCGTCGTCCGTCCTAGAAAGCTCGATGTCAAGAACCGAAGCAGCAAAAGTA
CAATCAGTTTTTTCAGCCAAGCTTGGACGGGCAAGAAGAAAAAATTCCCTCTCTGTCGAC
TCCTCCACCCCCCAGAAATTAACAGAAGAAACAATGCCTGTGGTACACGACCGACTCCCC
GATCTCAGCCTTTGGAGCAAAATTGACGAGGAATTAAAAGAGCAAGAGAAATCTTCCGCC
AATGGACTATTGTCCTCAACCTCAGCAAGGAGTAAGAGAAACACCGGTATGTCTGCCTAC
GACTACGATACCCAAGAAACTACCATGAGACGAAGAATGTTGTATTGTAAGAACGGATTC
AACCTTCAAATTTTACGAAACGGAAGAATATCTGGTACCCAAGAAAGCCACAATCAATAC
GCCGTCCTTGAATTTATTTCTACTGGAATCGGAAGTCTCACCATCCGGGGTGTCGCAAGT
GGTCTCTACCTGGCAATGAACAGCAAAGGAAGATTGTATGCTTCGGAAACATTCAATCGC
GAGTGCATCTTCTACGAAACAGTATTGGAAAACAACCAGAACACGTTCGAATCATTCGCC
CACAGAAATGGCTCAAAGAAATGCTACATCGCCCTTGGTCGTCATGGAAGACCAAAGCAA
GGATGCAGACTACACCCAAACAACCGACACAGCCAATTCTTGCCCAGGAACATCGATACT
GATAAAGTAAAAAACCTGTACTCTGGCCGACTCTACTGAGTACAGCTACGAAGGTGGAAA
CTGTACGGACACCTCGGCAACGCATCGTAGGATGATTCGCCAAGAGGAAGAAGCACCCTA
GCATTACCTTTCCGACAAGGAAGCTATACGTTTCAGTGTTACACAACTGCCCAGTATTAC
GCACTAGTTTCACAGCAGACGAACGCGGTGAGATCCCCAACTCCTGAGGACCCGCTCCAT
CTCGAAGATGAGCCCTTTAGACGCACACAGTAGATACCGCACACACGACATGCCAGCTTG
ATGTTAAGCTACATTTTGTTTCAGCACACGCCACGTTAGATTCTGCACCCAAGTCGACGT
CGCTCCCCGCCAATTTTATTTATTGCTTTTATATTTATCGCTCTACCGCCATATAGTGGC
AGCTCGTATATTTTTGTTACTTTTATTAATTGTAGTTTCGCCCCGCTGCTTCAAAATCGC
ACCCCTAGCGTTTTATTTTAGTTGTTTACCATTTGTTCGTTTATAAGATTTCTACCCAGC
TATTTTGCATCCGCCATTTTATGCAGTGACTTAATAAAGCAATTGAGAATCGAGACTC
| PANTHER |
Fibroblast_GF_fam (IPR002209) - T[32-321] 4.3E-123 |
| SUPERFAMILY |
IL1/FGF (IPR008996) - T[172-311] 1.24E-46 |
| SMART |
Fibroblast_GF_fam (IPR002209) - T[177-306] 2.2E-44 |
| Pfam |
Fibroblast_GF_fam (IPR002209) - T[179-303] 3.3E-42 |
| PRINTS |
Fibroblast_GF_fam (IPR002209) - T[181-193] 9.9E-18 - T[212-226] 9.9E-18 - T[232-244] 9.9E-18 - T[248-267] 9.9E-18 |
| CDD |
Fibroblast_GF_fam (IPR002209) - T[181-306] 6.91264E-53 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FGF16_HUMAN | 41.216 % | 138 | 9.92E-40 |
| FGF9_HUMAN | 44.805 % | 150 | 1.36E-44 |
| FGF20_HUMAN | 41.379 % | 143 | 1.59E-41 |